RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 LRRC15Q8TF66 581 aa14.1□□□□□ -0.15
ZNF548-210ENST00000600442 KIFAP3Q92845 792 aa14.1□□□□□ -0.15
ZNF548-210ENST00000600442 MRFAP1L1Q96HT8 127 aa14.1□□□□□ -0.15
ZNF548-210ENST00000600442 PAWRQ96IZ0 340 aaKnown RBP14.1□□□□□ -0.15
ZNF548-210ENST00000600442 APBA2Q99767 749 aa14.1□□□□□ -0.15
ZNF548-210ENST00000600442 SMARCAD1Q9H4L7 1026 aa14.1□□□□□ -0.15
ZNF548-210ENST00000600442 THAP9Q9H5L6 903 aa14.1□□□□□ -0.15
ZNF548-210ENST00000600442 PAK6Q9NQU5 681 aaPredicted RBP14.1□□□□□ -0.15
ZNF548-210ENST00000600442 OLFML3Q9NRN5 406 aa14.1□□□□□ -0.15
ZNF548-210ENST00000600442 FANCLQ9NW38 375 aa14.1□□□□□ -0.15
ZNF548-210ENST00000600442 SEPT9Q9UHD8 586 aaPredicted RBP14.1□□□□□ -0.15
ZNF548-210ENST00000600442 GDAQ9Y2T3 454 aa14.1□□□□□ -0.15
ZNF548-210ENST00000600442 SMCHD1A6NHR9 2005 aa14.1□□□□□ -0.15
ZNF548-210ENST00000600442 UBE4BO95155 1302 aa14.1□□□□□ -0.15
ZNF548-210ENST00000600442 RBM47A0AV96 593 aaKnown RBP14.09□□□□□ -0.15
ZNF548-210ENST00000600442 NRDCO43847 1150 aa14.09□□□□□ -0.15
ZNF548-210ENST00000600442 CALUO43852 315 aaPredicted RBP14.09□□□□□ -0.15
ZNF548-210ENST00000600442 MAPTP10636 758 aaKnown RBP14.09□□□□□ -0.15
ZNF548-210ENST00000600442 RPL13P26373 211 aaKnown RBP14.09□□□□□ -0.15
ZNF548-210ENST00000600442 CDC25BP30305 580 aa14.09□□□□□ -0.15
ZNF548-210ENST00000600442 RFC5P40937 340 aa14.09□□□□□ -0.15
ZNF548-210ENST00000600442 ZNF75DP51815 510 aa14.09□□□□□ -0.15
ZNF548-210ENST00000600442 UBASH3AP57075 661 aa14.09□□□□□ -0.15
ZNF548-210ENST00000600442 SP2Q02086 613 aa14.09□□□□□ -0.15
ZNF548-210ENST00000600442 PRKCEQ02156 737 aa14.09□□□□□ -0.15
ZNF548-210ENST00000600442 RAD51AP2Q09MP3 1159 aa14.09□□□□□ -0.15
ZNF548-210ENST00000600442 ACVR2BQ13705 512 aa14.09□□□□□ -0.15
ZNF548-210ENST00000600442 NCAPHQ15003 741 aa14.09□□□□□ -0.15
ZNF548-210ENST00000600442 LY6KQ17RY6 165 aa14.09□□□□□ -0.15
ZNF548-210ENST00000600442 ODR4Q5SWX8 454 aa14.09□□□□□ -0.15
ZNF548-210ENST00000600442 CCDC62Q6P9F0 684 aa14.09□□□□□ -0.15
ZNF548-210ENST00000600442 PLPPR4Q7Z2D5 763 aa14.09□□□□□ -0.15
ZNF548-210ENST00000600442 FAM178BQ8IXR5 827 aa14.09□□□□□ -0.15
ZNF548-210ENST00000600442 CSGALNACT2Q8N6G5 542 aa14.09□□□□□ -0.15
ZNF548-210ENST00000600442 AFAP1L1Q8TED9 768 aa14.09□□□□□ -0.15
ZNF548-210ENST00000600442 SLC7A3Q8WY07 619 aa14.09□□□□□ -0.15
ZNF548-210ENST00000600442 EMID1Q96A84 441 aaPredicted RBP14.09□□□□□ -0.15
ZNF548-210ENST00000600442 LRCH3Q96II8 777 aa14.09□□□□□ -0.15
ZNF548-210ENST00000600442 IFT74Q96LB3 600 aa14.09□□□□□ -0.15
ZNF548-210ENST00000600442 FGD4Q96M96 766 aa14.09□□□□□ -0.15
ZNF548-210ENST00000600442 RUSC1Q9BVN2 902 aa14.09□□□□□ -0.15
ZNF548-210ENST00000600442 CRISPLD2Q9H0B8 497 aa14.09□□□□□ -0.15
ZNF548-210ENST00000600442 NRBP1Q9UHY1 535 aa14.09□□□□□ -0.15
ZNF548-210ENST00000600442 ZNF215Q9UL58 517 aaPredicted RBP14.09□□□□□ -0.15
ZNF548-210ENST00000600442 MAPK8IP1Q9UQF2 711 aa14.09□□□□□ -0.15
ZNF548-210ENST00000600442 MAFBQ9Y5Q3 323 aaPredicted RBP14.09□□□□□ -0.15
ZNF548-210ENST00000600442 EIF3DO15371 548 aaKnown RBP eCLIP14.08□□□□□ -0.16
ZNF548-210ENST00000600442 GAS2O43903 313 aaKnown RBP14.08□□□□□ -0.16
ZNF548-210ENST00000600442 GCNT3O95395 438 aa14.08□□□□□ -0.16
ZNF548-210ENST00000600442 GNA14O95837 355 aa14.08□□□□□ -0.16
ZNF548-210ENST00000600442 OATP04181 439 aa14.08□□□□□ -0.16
ZNF548-210ENST00000600442 PRKCSHP14314 528 aaPredicted RBP14.08□□□□□ -0.16
ZNF548-210ENST00000600442 EEF1GP26641 437 aaKnown RBP14.08□□□□□ -0.16
ZNF548-210ENST00000600442 TCF7P36402 384 aaPredicted RBP14.08□□□□□ -0.16
ZNF548-210ENST00000600442 POLGP54098 1239 aaPredicted RBP14.08□□□□□ -0.16
ZNF548-210ENST00000600442 STX17P56962 302 aa14.08□□□□□ -0.16
ZNF548-210ENST00000600442 FANCCQ00597 558 aa14.08□□□□□ -0.16
ZNF548-210ENST00000600442 EHHADHQ08426 723 aa14.08□□□□□ -0.16
ZNF548-210ENST00000600442 HS1BP3Q53T59 392 aa14.08□□□□□ -0.16
ZNF548-210ENST00000600442 MFSD14CQ5VZR4 134 aa14.08□□□□□ -0.16
ZNF548-210ENST00000600442 HS2ST1Q7LGA3 356 aa14.08□□□□□ -0.16
ZNF548-210ENST00000600442 ATP6V0A4Q9HBG4 840 aa14.08□□□□□ -0.16
ZNF548-210ENST00000600442 ZHX1Q9UKY1 873 aaPredicted RBP14.08□□□□□ -0.16
ZNF548-210ENST00000600442 IGSF9BQ9UPX0 1349 aa14.08□□□□□ -0.16
ZNF548-210ENST00000600442 IGKV6D-21A0A0A0MT36 114 aa14.07□□□□□ -0.16
ZNF548-210ENST00000600442 NPHP3-ACAD11A0A0J9YXS1 232 aa14.07□□□□□ -0.16
ZNF548-210ENST00000600442 USO1O60763 962 aaKnown RBP14.07□□□□□ -0.16
ZNF548-210ENST00000600442 HIP1RO75146 1068 aa14.07□□□□□ -0.16
ZNF548-210ENST00000600442 PPFIA4O75335 1185 aa14.07□□□□□ -0.16
ZNF548-210ENST00000600442 XRCC5P13010 732 aaKnown RBP14.07□□□□□ -0.16
ZNF548-210ENST00000600442 PLS3P13797 630 aa14.07□□□□□ -0.16
ZNF548-210ENST00000600442 CD44P16070 742 aaKnown RBP14.07□□□□□ -0.16
ZNF548-210ENST00000600442 ZNF131P52739 623 aa14.07□□□□□ -0.16
ZNF548-210ENST00000600442 FKBP3Q00688 224 aaKnown RBP14.07□□□□□ -0.16
ZNF548-210ENST00000600442 DMP1Q13316 513 aaPredicted RBP14.07□□□□□ -0.16
ZNF548-210ENST00000600442 PPP2R5AQ15172 486 aa14.07□□□□□ -0.16
ZNF548-210ENST00000600442 DUSP28Q4G0W2 176 aa14.07□□□□□ -0.16
ZNF548-210ENST00000600442 FAM102BQ5T8I3 360 aa14.07□□□□□ -0.16
ZNF548-210ENST00000600442 UTP14CQ5TAP6 766 aaKnown RBP14.07□□□□□ -0.16
ZNF548-210ENST00000600442 CENPPQ6IPU0 288 aa14.07□□□□□ -0.16
ZNF548-210ENST00000600442 NECAB2Q7Z6G3 386 aa14.07□□□□□ -0.16
ZNF548-210ENST00000600442 SFR1Q86XK3 245 aa14.07□□□□□ -0.16
ZNF548-210ENST00000600442 KIAA0895Q8NCT3 520 aa14.07□□□□□ -0.16
ZNF548-210ENST00000600442 PPTC7Q8NI37 304 aa14.07□□□□□ -0.16
ZNF548-210ENST00000600442 BBXQ8WY36 941 aaPredicted RBP14.07□□□□□ -0.16
ZNF548-210ENST00000600442 PDLIM2Q96JY6 352 aa14.07□□□□□ -0.16
ZNF548-210ENST00000600442 GPR20Q99678 358 aa14.07□□□□□ -0.16
ZNF548-210ENST00000600442 NIFKQ9BYG3 293 aaKnown RBP14.07□□□□□ -0.16
ZNF548-210ENST00000600442 TMEM206Q9H813 350 aa14.07□□□□□ -0.16
ZNF548-210ENST00000600442 CYP26B1Q9NR63 512 aa14.07□□□□□ -0.16
ZNF548-210ENST00000600442 ERAP1Q9NZ08 941 aa14.07□□□□□ -0.16
ZNF548-210ENST00000600442 CGNQ9P2M7 1197 aaKnown RBP14.07□□□□□ -0.16
ZNF548-210ENST00000600442 WRAP73Q9P2S5 460 aaPredicted RBP14.07□□□□□ -0.16
ZNF548-210ENST00000600442 EXOC7Q9UPT5 735 aa14.07□□□□□ -0.16
ZNF548-210ENST00000600442 GSTTP1A0A1W2PQM5 241 aa14.06□□□□□ -0.16
ZNF548-210ENST00000600442 CETN3O15182 167 aa14.06□□□□□ -0.16
ZNF548-210ENST00000600442 SORBS3O60504 671 aa14.06□□□□□ -0.16
ZNF548-210ENST00000600442 TPM1P09493 284 aa14.06□□□□□ -0.16
ZNF548-210ENST00000600442 RTP1P59025 263 aa14.06□□□□□ -0.16
ZNF548-210ENST00000600442 SNRPFP62306 86 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms