RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 REEP2Q9BRK0 252 aa10.42□□□□□ -0.74
VPS25-205ENST00000590339 RUSC1Q9BVN2 902 aa10.42□□□□□ -0.74
VPS25-205ENST00000590339 FGFBP2Q9BYJ0 223 aa10.42□□□□□ -0.74
VPS25-205ENST00000590339 BMP2KQ9NSY1 1161 aaPredicted RBP10.42□□□□□ -0.74
VPS25-205ENST00000590339 TAB2Q9NYJ8 693 aa10.42□□□□□ -0.74
VPS25-205ENST00000590339 CYP39A1Q9NYL5 469 aa10.42□□□□□ -0.74
VPS25-205ENST00000590339 RGL1Q9NZL6 768 aa10.42□□□□□ -0.74
VPS25-205ENST00000590339 DOCK5Q9H7D0 1870 aa10.42□□□□□ -0.74
VPS25-205ENST00000590339 MYH11P35749 1972 aa10.41□□□□□ -0.74
VPS25-205ENST00000590339 SYNGAP1Q96PV0 1343 aa10.41□□□□□ -0.74
VPS25-205ENST00000590339 NPHP3-ACAD11A0A0J9YXS1 232 aa10.41□□□□□ -0.74
VPS25-205ENST00000590339 A0A1W2PQC6 194 aa10.41□□□□□ -0.74
VPS25-205ENST00000590339 CHMP2AO43633 222 aa10.41□□□□□ -0.74
VPS25-205ENST00000590339 SSBP05455 408 aaKnown RBP eCLIP10.41□□□□□ -0.74
VPS25-205ENST00000590339 CCND2P30279 289 aa10.41□□□□□ -0.74
VPS25-205ENST00000590339 MTMR1Q13613 665 aa10.41□□□□□ -0.74
VPS25-205ENST00000590339 CTTNQ14247 550 aaKnown RBP10.41□□□□□ -0.74
VPS25-205ENST00000590339 PTPN21Q16825 1174 aa10.41□□□□□ -0.74
VPS25-205ENST00000590339 BMT2Q1RMZ1 405 aa10.41□□□□□ -0.74
VPS25-205ENST00000590339 TRIM60Q495X7 471 aa10.41□□□□□ -0.74
VPS25-205ENST00000590339 EPM2AIP1Q7L775 607 aaPredicted RBP10.41□□□□□ -0.74
VPS25-205ENST00000590339 VSIG10LQ86VR7 867 aa10.41□□□□□ -0.74
VPS25-205ENST00000590339 MYOCDQ8IZQ8 938 aa10.41□□□□□ -0.74
VPS25-205ENST00000590339 CSGALNACT2Q8N6G5 542 aa10.41□□□□□ -0.74
VPS25-205ENST00000590339 ZNF507Q8TCN5 953 aa10.41□□□□□ -0.74
VPS25-205ENST00000590339 VTI1AQ96AJ9 217 aa10.41□□□□□ -0.74
VPS25-205ENST00000590339 ZFP91Q96JP5 570 aaPredicted RBP10.41□□□□□ -0.74
VPS25-205ENST00000590339 CNOT6LQ96LI5 555 aaKnown RBP10.41□□□□□ -0.74
VPS25-205ENST00000590339 LXNQ9BS40 222 aa10.41□□□□□ -0.74
VPS25-205ENST00000590339 SRRTQ9BXP5 876 aaKnown RBP10.41□□□□□ -0.74
VPS25-205ENST00000590339 BHMT2Q9H2M3 363 aa10.41□□□□□ -0.74
VPS25-205ENST00000590339 ABHD16BQ9H3Z7 469 aa10.41□□□□□ -0.74
VPS25-205ENST00000590339 PRDM5Q9NQX1 630 aaPredicted RBP10.41□□□□□ -0.74
VPS25-205ENST00000590339 WRAP73Q9P2S5 460 aaPredicted RBP10.41□□□□□ -0.74
VPS25-205ENST00000590339 PRKAG2Q9UGJ0 569 aa10.41□□□□□ -0.74
VPS25-205ENST00000590339 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.4□□□□□ -0.74
VPS25-205ENST00000590339 MYADML2A6NDP7 307 aa10.4□□□□□ -0.74
VPS25-205ENST00000590339 ASB14A6NK59 587 aa10.4□□□□□ -0.74
VPS25-205ENST00000590339 MFAP3LO75121 409 aa10.4□□□□□ -0.74
VPS25-205ENST00000590339 STAM2O75886 525 aa10.4□□□□□ -0.74
VPS25-205ENST00000590339 C6orf222P0C671 652 aaPredicted RBP10.4□□□□□ -0.74
VPS25-205ENST00000590339 GAP43P17677 238 aa10.4□□□□□ -0.74
VPS25-205ENST00000590339 ZNF131P52739 623 aa10.4□□□□□ -0.74
VPS25-205ENST00000590339 TRIM14Q14142 442 aa10.4□□□□□ -0.74
VPS25-205ENST00000590339 KCNA10Q16322 511 aa10.4□□□□□ -0.74
VPS25-205ENST00000590339 ARHGEF16Q5VV41 709 aa10.4□□□□□ -0.74
VPS25-205ENST00000590339 RINT1Q6NUQ1 792 aa10.4□□□□□ -0.74
VPS25-205ENST00000590339 C1orf186Q6ZWK4 172 aa10.4□□□□□ -0.74
VPS25-205ENST00000590339 MIER3Q7Z3K6 550 aa10.4□□□□□ -0.74
VPS25-205ENST00000590339 SFR1Q86XK3 245 aa10.4□□□□□ -0.74
VPS25-205ENST00000590339 RDM1Q8NG50 284 aa10.4□□□□□ -0.74
VPS25-205ENST00000590339 SCFD1Q8WVM8 642 aa10.4□□□□□ -0.74
VPS25-205ENST00000590339 NACC1Q96RE7 527 aa10.4□□□□□ -0.74
VPS25-205ENST00000590339 GDF15Q99988 308 aa10.4□□□□□ -0.74
VPS25-205ENST00000590339 LBHD1Q9BQE6 289 aaPredicted RBP10.4□□□□□ -0.74
VPS25-205ENST00000590339 SENP7Q9BQF6 1050 aa10.4□□□□□ -0.74
VPS25-205ENST00000590339 UBE2OQ9C0C9 1292 aaKnown RBP10.4□□□□□ -0.74
VPS25-205ENST00000590339 PRO3102Q9H379 93 aa10.4□□□□□ -0.74
VPS25-205ENST00000590339 KCTD10Q9H3F6 313 aa10.4□□□□□ -0.74
VPS25-205ENST00000590339 PDGFCQ9NRA1 345 aa10.4□□□□□ -0.74
VPS25-205ENST00000590339 OLFML3Q9NRN5 406 aa10.4□□□□□ -0.74
VPS25-205ENST00000590339 TBC1D22BQ9NU19 505 aa10.4□□□□□ -0.74
VPS25-205ENST00000590339 KCND2Q9NZV8 630 aa10.4□□□□□ -0.74
VPS25-205ENST00000590339 ASTN1O14525 1302 aa10.39□□□□□ -0.75
VPS25-205ENST00000590339 NFASCO94856 1347 aa10.39□□□□□ -0.75
VPS25-205ENST00000590339 UBE4BO95155 1302 aa10.39□□□□□ -0.75
VPS25-205ENST00000590339 N4BP3O15049 544 aa10.39□□□□□ -0.75
VPS25-205ENST00000590339 MAFGO15525 162 aa10.39□□□□□ -0.75
VPS25-205ENST00000590339 DYNC1LI2O43237 492 aaPredicted RBP10.39□□□□□ -0.75
VPS25-205ENST00000590339 ADCY6O43306 1168 aa10.39□□□□□ -0.75
VPS25-205ENST00000590339 NRDCO43847 1150 aa10.39□□□□□ -0.75
VPS25-205ENST00000590339 ADAMTS4O75173 837 aa10.39□□□□□ -0.75
VPS25-205ENST00000590339 DUSP11O75319 330 aaKnown RBP10.39□□□□□ -0.75
VPS25-205ENST00000590339 RGS20O76081 388 aa10.39□□□□□ -0.75
VPS25-205ENST00000590339 KIF20AO95235 890 aa10.39□□□□□ -0.75
VPS25-205ENST00000590339 GYPCP04921 128 aa10.39□□□□□ -0.75
VPS25-205ENST00000590339 KRT18P05783 430 aaKnown RBP10.39□□□□□ -0.75
VPS25-205ENST00000590339 P4HBP07237 508 aaKnown RBP10.39□□□□□ -0.75
VPS25-205ENST00000590339 NR3C2P08235 984 aa10.39□□□□□ -0.75
VPS25-205ENST00000590339 GUCY2CP25092 1073 aa10.39□□□□□ -0.75
VPS25-205ENST00000590339 JAK3P52333 1124 aa10.39□□□□□ -0.75
VPS25-205ENST00000590339 ACLYP53396 1101 aa10.39□□□□□ -0.75
VPS25-205ENST00000590339 MARSP56192 900 aaKnown RBP10.39□□□□□ -0.75
VPS25-205ENST00000590339 BEX3Q00994 111 aa10.39□□□□□ -0.75
VPS25-205ENST00000590339 KRT76Q01546 638 aa10.39□□□□□ -0.75
VPS25-205ENST00000590339 CACNB1Q02641 598 aaPredicted RBP10.39□□□□□ -0.75
VPS25-205ENST00000590339 TNFAIP2Q03169 654 aa10.39□□□□□ -0.75
VPS25-205ENST00000590339 TLE2Q04725 743 aa10.39□□□□□ -0.75
VPS25-205ENST00000590339 MAPK7Q13164 816 aa10.39□□□□□ -0.75
VPS25-205ENST00000590339 EDRF1Q3B7T1 1238 aa10.39□□□□□ -0.75
VPS25-205ENST00000590339 HERC4Q5GLZ8 1057 aaPredicted RBP10.39□□□□□ -0.75
VPS25-205ENST00000590339 GNASQ5JWF2 1037 aa10.39□□□□□ -0.75
VPS25-205ENST00000590339 MIIPQ5JXC2 388 aa10.39□□□□□ -0.75
VPS25-205ENST00000590339 TMEM63BQ5T3F8 832 aa10.39□□□□□ -0.75
VPS25-205ENST00000590339 PPP4R3CPQ6ZMV5 832 aa10.39□□□□□ -0.75
VPS25-205ENST00000590339 FBXO16Q8IX29 292 aaPredicted RBP10.39□□□□□ -0.75
VPS25-205ENST00000590339 CCAR2Q8N163 923 aaKnown RBP10.39□□□□□ -0.75
VPS25-205ENST00000590339 NSUN6Q8TEA1 469 aaKnown RBP10.39□□□□□ -0.75
VPS25-205ENST00000590339 CEP63Q96MT8 703 aa10.39□□□□□ -0.75
VPS25-205ENST00000590339 PANX2Q96RD6 677 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms