RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 USP11P51784 963 aa6.61□□□□□ -1.35
DNMT1-220ENST00000589351 KLRC3Q07444 240 aa6.61□□□□□ -1.35
DNMT1-220ENST00000589351 ACVR2BQ13705 512 aa6.61□□□□□ -1.35
DNMT1-220ENST00000589351 RAB30Q15771 203 aa6.61□□□□□ -1.35
DNMT1-220ENST00000589351 LRRFIP1Q32MZ4 808 aaKnown RBP6.61□□□□□ -1.35
DNMT1-220ENST00000589351 KIAA1755Q5JYT7 1200 aa6.61□□□□□ -1.35
DNMT1-220ENST00000589351 FAM83BQ5T0W9 1011 aa6.61□□□□□ -1.35
DNMT1-220ENST00000589351 SNRNP48Q6IEG0 339 aaKnown RBP6.61□□□□□ -1.35
DNMT1-220ENST00000589351 PSRC1Q6PGN9 363 aaPredicted RBP6.61□□□□□ -1.35
DNMT1-220ENST00000589351 MAMDC4Q6UXC1 1216 aa6.61□□□□□ -1.35
DNMT1-220ENST00000589351 NOL8Q76FK4 1167 aaKnown RBP6.61□□□□□ -1.35
DNMT1-220ENST00000589351 CPXCR1Q8N123 301 aa6.61□□□□□ -1.35
DNMT1-220ENST00000589351 KLHDC9Q8NEP7 349 aa6.61□□□□□ -1.35
DNMT1-220ENST00000589351 CHST13Q8NET6 341 aa6.61□□□□□ -1.35
DNMT1-220ENST00000589351 GATA6Q92908 595 aa6.61□□□□□ -1.35
DNMT1-220ENST00000589351 USP26Q9BXU7 913 aa6.61□□□□□ -1.35
DNMT1-220ENST00000589351 BOLA2Q9H3K6 86 aa6.61□□□□□ -1.35
DNMT1-220ENST00000589351 CYP4F12Q9HCS2 524 aa6.61□□□□□ -1.35
DNMT1-220ENST00000589351 FBXO28Q9NVF7 368 aa6.61□□□□□ -1.35
DNMT1-220ENST00000589351 DZANK1Q9NVP4 752 aa6.61□□□□□ -1.35
DNMT1-220ENST00000589351 NYAP2Q9P242 653 aa6.61□□□□□ -1.35
DNMT1-220ENST00000589351 ARPP21Q9UBL0 812 aaPredicted RBP6.61□□□□□ -1.35
DNMT1-220ENST00000589351 ZC3H7BQ9UGR2 993 aaKnown RBP6.61□□□□□ -1.35
DNMT1-220ENST00000589351 SALL4Q9UJQ4 1053 aa6.61□□□□□ -1.35
DNMT1-220ENST00000589351 ZNF214Q9UL59 606 aaPredicted RBP6.61□□□□□ -1.35
DNMT1-220ENST00000589351 NAV1Q8NEY1 1877 aa6.61□□□□□ -1.35
DNMT1-220ENST00000589351 LTBP2Q14767 1821 aa6.61□□□□□ -1.35
DNMT1-220ENST00000589351 MYH8P13535 1937 aa6.6□□□□□ -1.35
DNMT1-220ENST00000589351 ROBO3Q96MS0 1386 aa6.6□□□□□ -1.35
DNMT1-220ENST00000589351 ZBED9Q6R2W3 1325 aa6.6□□□□□ -1.35
DNMT1-220ENST00000589351 SYNRGQ9UMZ2 1314 aa6.6□□□□□ -1.35
DNMT1-220ENST00000589351 LOC100289279A0A1B0GTE1 492 aa6.6□□□□□ -1.35
DNMT1-220ENST00000589351 ASB14A6NK59 587 aa6.6□□□□□ -1.35
DNMT1-220ENST00000589351 MINDY4BA8MYZ0 360 aa6.6□□□□□ -1.35
DNMT1-220ENST00000589351 PDE2AO00408 941 aaPredicted RBP6.6□□□□□ -1.35
DNMT1-220ENST00000589351 ATP2A1O14983 1001 aa6.6□□□□□ -1.35
DNMT1-220ENST00000589351 PRKAB2O43741 272 aa6.6□□□□□ -1.35
DNMT1-220ENST00000589351 ASGR1P07306 291 aa6.6□□□□□ -1.35
DNMT1-220ENST00000589351 CYP2D6P10635 497 aa6.6□□□□□ -1.35
DNMT1-220ENST00000589351 ITGB8P26012 769 aa6.6□□□□□ -1.35
DNMT1-220ENST00000589351 CST5P28325 142 aaPredicted RBP6.6□□□□□ -1.35
DNMT1-220ENST00000589351 GJA9P57773 515 aa6.6□□□□□ -1.35
DNMT1-220ENST00000589351 MRPS5P82675 430 aaKnown RBP6.6□□□□□ -1.35
DNMT1-220ENST00000589351 HNRNPUQ00839 825 aaKnown RBP eCLIP6.6□□□□□ -1.35
DNMT1-220ENST00000589351 OCLNQ16625 522 aa6.6□□□□□ -1.35
DNMT1-220ENST00000589351 CCDC144BQ3MJ40 725 aa6.6□□□□□ -1.35
DNMT1-220ENST00000589351 SBK1Q52WX2 424 aa6.6□□□□□ -1.35
DNMT1-220ENST00000589351 AKNAD1Q5T1N1 836 aa6.6□□□□□ -1.35
DNMT1-220ENST00000589351 CTR9Q6PD62 1173 aa6.6□□□□□ -1.35
DNMT1-220ENST00000589351 RPUSD2Q8IZ73 545 aaKnown RBP6.6□□□□□ -1.35
DNMT1-220ENST00000589351 C2CD4AQ8NCU7 369 aaPredicted RBP6.6□□□□□ -1.35
DNMT1-220ENST00000589351 CHURC1Q8WUH1 139 aa6.6□□□□□ -1.35
DNMT1-220ENST00000589351 PPM1EQ8WY54 764 aa6.6□□□□□ -1.35
DNMT1-220ENST00000589351 UBXN4Q92575 508 aa6.6□□□□□ -1.35
DNMT1-220ENST00000589351 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.6□□□□□ -1.357e-11■■■□□ 18.7
DNMT1-220ENST00000589351 AP5M1Q9H0R1 490 aa6.6□□□□□ -1.35
DNMT1-220ENST00000589351 SLC28A3Q9HAS3 691 aa6.6□□□□□ -1.35
DNMT1-220ENST00000589351 CLIP2Q9UDT6 1046 aa6.6□□□□□ -1.35
DNMT1-220ENST00000589351 FEM1BQ9UK73 627 aa6.6□□□□□ -1.35
DNMT1-220ENST00000589351 DDX19BQ9UMR2 479 aa6.6□□□□□ -1.35
DNMT1-220ENST00000589351 UNC80Q8N2C7 3258 aa6.59□□□□□ -1.35
DNMT1-220ENST00000589351 DNAJC25-GNG10A0A024R161 153 aa6.59□□□□□ -1.35
DNMT1-220ENST00000589351 LOC102724159A0A0B4J2E5 919 aa6.59□□□□□ -1.35
DNMT1-220ENST00000589351 MARCH6O60337 910 aa6.59□□□□□ -1.35
DNMT1-220ENST00000589351 SNAI1O95863 264 aaPredicted RBP6.59□□□□□ -1.35
DNMT1-220ENST00000589351 APPP05067 770 aa6.59□□□□□ -1.35
DNMT1-220ENST00000589351 SLC3A2P08195 630 aaKnown RBP6.59□□□□□ -1.35
DNMT1-220ENST00000589351 RLBP1P12271 317 aa6.59□□□□□ -1.35
DNMT1-220ENST00000589351 GNAT2P19087 354 aa6.59□□□□□ -1.35
DNMT1-220ENST00000589351 CDK7P50613 346 aa6.59□□□□□ -1.35
DNMT1-220ENST00000589351 OAZ1P54368 228 aa6.59□□□□□ -1.35
DNMT1-220ENST00000589351 EPHB4P54760 987 aa6.59□□□□□ -1.35
DNMT1-220ENST00000589351 TNFAIP2Q03169 654 aa6.59□□□□□ -1.35
DNMT1-220ENST00000589351 PDE4BQ07343 736 aa6.59□□□□□ -1.35
DNMT1-220ENST00000589351 IKQ13123 557 aaPredicted RBP6.59□□□□□ -1.35
DNMT1-220ENST00000589351 NAA30Q147X3 362 aaPredicted RBP6.59□□□□□ -1.35
DNMT1-220ENST00000589351 PWP2Q15269 919 aaKnown RBP6.59□□□□□ -1.35
DNMT1-220ENST00000589351 AAK1Q2M2I8 961 aa6.59□□□□□ -1.35
DNMT1-220ENST00000589351 TMEM240Q5SV17 173 aa6.59□□□□□ -1.35
DNMT1-220ENST00000589351 ZNF365Q70YC5 407 aa6.59□□□□□ -1.35
DNMT1-220ENST00000589351 REPS2Q8NFH8 660 aa6.59□□□□□ -1.35
DNMT1-220ENST00000589351 GPATCH3Q96I76 525 aa6.59□□□□□ -1.35
DNMT1-220ENST00000589351 HAUS7Q99871 368 aa6.59□□□□□ -1.35
DNMT1-220ENST00000589351 LRRC4CQ9HCJ2 640 aa6.59□□□□□ -1.35
DNMT1-220ENST00000589351 IL23AQ9NPF7 189 aa6.59□□□□□ -1.35
DNMT1-220ENST00000589351 THEGQ9P2T0 379 aa6.59□□□□□ -1.35
DNMT1-220ENST00000589351 ISY1Q9ULR0 285 aaKnown RBP6.59□□□□□ -1.35
DNMT1-220ENST00000589351 SYNPO2Q9UMS6 1093 aa6.59□□□□□ -1.35
DNMT1-220ENST00000589351 PLXNA1Q9UIW2 1896 aa6.59□□□□□ -1.35
DNMT1-220ENST00000589351 A0A0G2JMZ2 1700 aa6.59□□□□□ -1.36
DNMT1-220ENST00000589351 CYP2D7A0A087X1C5 515 aa6.58□□□□□ -1.36
DNMT1-220ENST00000589351 TTLL1O95922 423 aa6.58□□□□□ -1.36
DNMT1-220ENST00000589351 ZFYP08048 801 aaPredicted RBP6.58□□□□□ -1.36
DNMT1-220ENST00000589351 SUPT20HL2P0C7V6 817 aa6.58□□□□□ -1.36
DNMT1-220ENST00000589351 TSPY3P0CV98 308 aa6.58□□□□□ -1.36
DNMT1-220ENST00000589351 TSPY8P0CW00 308 aa6.58□□□□□ -1.36
DNMT1-220ENST00000589351 ACRP10323 421 aa6.58□□□□□ -1.36
DNMT1-220ENST00000589351 CSF2RAP15509 400 aa6.58□□□□□ -1.36
DNMT1-220ENST00000589351 TDO2P48775 406 aa6.58□□□□□ -1.36
DNMT1-220ENST00000589351 TKFCQ3LXA3 575 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 529.5 ms