RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 SHC4Q6S5L8 630 aa21.8■■□□□ 1.08
CIRBP-220ENST00000588917 METTL13Q8N6R0 699 aa21.8■■□□□ 1.08
CIRBP-220ENST00000588917 CHAMP1Q96JM3 812 aa21.8■■□□□ 1.08
CIRBP-220ENST00000588917 CEP89Q96ST8 783 aa21.8■■□□□ 1.08
CIRBP-220ENST00000588917 DHX33Q9H6R0 707 aaKnown RBP21.8■■□□□ 1.08
CIRBP-220ENST00000588917 STK17AQ9UEE5 414 aa21.8■■□□□ 1.08
CIRBP-220ENST00000588917 IGKV6-21A0A0C4DH24 114 aa21.79■■□□□ 1.08
CIRBP-220ENST00000588917 A0A1W2PQ27 194 aa21.79■■□□□ 1.08
CIRBP-220ENST00000588917 A0A1W2PQ64 194 aa21.79■■□□□ 1.08
CIRBP-220ENST00000588917 A0A1W2PQD8 194 aa21.79■■□□□ 1.08
CIRBP-220ENST00000588917 E9PMD0 336 aa21.79■■□□□ 1.08
CIRBP-220ENST00000588917 PITPNM1O00562 1244 aa21.79■■□□□ 1.08
CIRBP-220ENST00000588917 KARSQ15046 597 aaKnown RBP21.79■■□□□ 1.08
CIRBP-220ENST00000588917 CLEC17AQ6ZS10 378 aa21.79■■□□□ 1.08
CIRBP-220ENST00000588917 USP49Q70CQ1 688 aa21.79■■□□□ 1.08
CIRBP-220ENST00000588917 SLC17A8Q8NDX2 589 aa21.79■■□□□ 1.08
CIRBP-220ENST00000588917 TCP11Q8WWU5 503 aa21.79■■□□□ 1.08
CIRBP-220ENST00000588917 BHMT2Q9H2M3 363 aa21.79■■□□□ 1.08
CIRBP-220ENST00000588917 HIPK3Q9H422 1215 aa21.79■■□□□ 1.08
CIRBP-220ENST00000588917 SUGCTQ9HAC7 445 aa21.79■■□□□ 1.08
CIRBP-220ENST00000588917 GDPD2Q9HCC8 539 aa21.79■■□□□ 1.08
CIRBP-220ENST00000588917 PRDM5Q9NQX1 630 aaPredicted RBP21.79■■□□□ 1.08
CIRBP-220ENST00000588917 PDLIM7Q9NR12 457 aa21.79■■□□□ 1.08
CIRBP-220ENST00000588917 TBX21Q9UL17 535 aa21.79■■□□□ 1.08
CIRBP-220ENST00000588917 TMEM150BA6NC51 233 aa21.78■■□□□ 1.08
CIRBP-220ENST00000588917 PARNO95453 639 aaKnown RBP21.78■■□□□ 1.08
CIRBP-220ENST00000588917 RAG1P15918 1043 aa21.78■■□□□ 1.08
CIRBP-220ENST00000588917 PLCG1P19174 1290 aa21.78■■□□□ 1.08
CIRBP-220ENST00000588917 RBL2Q08999 1139 aa21.78■■□□□ 1.08
CIRBP-220ENST00000588917 IER5Q5VY09 327 aa21.78■■□□□ 1.08
CIRBP-220ENST00000588917 DEFB123Q8N688 67 aa21.78■■□□□ 1.08
CIRBP-220ENST00000588917 SYT2Q8N9I0 419 aaPredicted RBP21.78■■□□□ 1.08
CIRBP-220ENST00000588917 IQUBQ8NA54 791 aa21.78■■□□□ 1.08
CIRBP-220ENST00000588917 MCPH1Q8NEM0 835 aa21.78■■□□□ 1.08
CIRBP-220ENST00000588917 CTAGE1Q96RT6 745 aa21.78■■□□□ 1.08
CIRBP-220ENST00000588917 MAP7D2Q96T17 732 aa21.78■■□□□ 1.08
CIRBP-220ENST00000588917 PLIN2Q99541 437 aa21.78■■□□□ 1.08
CIRBP-220ENST00000588917 SH2D3AQ9BRG2 576 aa21.78■■□□□ 1.08
CIRBP-220ENST00000588917 CUEDC2Q9H467 287 aa21.78■■□□□ 1.08
CIRBP-220ENST00000588917 KCND2Q9NZV8 630 aa21.78■■□□□ 1.08
CIRBP-220ENST00000588917 DNAH12Q6ZR08 3092 aa21.77■■□□□ 1.08
CIRBP-220ENST00000588917 A0A087WWV3 80 aa21.77■■□□□ 1.08
CIRBP-220ENST00000588917 M0QZ92 97 aa21.77■■□□□ 1.08
CIRBP-220ENST00000588917 ASAP2O43150 1006 aa21.77■■□□□ 1.08
CIRBP-220ENST00000588917 TIMP1P01033 207 aa21.77■■□□□ 1.08
CIRBP-220ENST00000588917 THPOP40225 353 aa21.77■■□□□ 1.08
CIRBP-220ENST00000588917 MDM2Q00987 491 aaPredicted RBP21.77■■□□□ 1.08
CIRBP-220ENST00000588917 PADI6Q6TGC4 694 aa21.77■■□□□ 1.08
CIRBP-220ENST00000588917 DNAJB3Q8WWF6 145 aa21.77■■□□□ 1.08
CIRBP-220ENST00000588917 GBP4Q96PP9 640 aa21.77■■□□□ 1.08
CIRBP-220ENST00000588917 MTRQ99707 1265 aa21.77■■□□□ 1.08
CIRBP-220ENST00000588917 TIPINQ9BVW5 301 aa21.77■■□□□ 1.08
CIRBP-220ENST00000588917 LRRC27Q9C0I9 530 aa21.77■■□□□ 1.08
CIRBP-220ENST00000588917 ATP6V0A4Q9HBG4 840 aa21.77■■□□□ 1.08
CIRBP-220ENST00000588917 COL6A3P12111 3177 aa21.76■■□□□ 1.07
CIRBP-220ENST00000588917 PLA2G4BP0C869 781 aa21.76■■□□□ 1.07
CIRBP-220ENST00000588917 CYP11B2P19099 503 aa21.76■■□□□ 1.07
CIRBP-220ENST00000588917 STAT6P42226 847 aa21.76■■□□□ 1.07
CIRBP-220ENST00000588917 KIAA0319LQ8IZA0 1049 aa21.76■■□□□ 1.07
CIRBP-220ENST00000588917 RAD54LQ92698 747 aa21.76■■□□□ 1.07
CIRBP-220ENST00000588917 LBHD1Q9BQE6 289 aaPredicted RBP21.76■■□□□ 1.07
CIRBP-220ENST00000588917 NOC4LQ9BVI4 516 aaKnown RBP21.76■■□□□ 1.07
CIRBP-220ENST00000588917 PANK2Q9BZ23 570 aa21.76■■□□□ 1.07
CIRBP-220ENST00000588917 KCNH3Q9ULD8 1083 aa21.76■■□□□ 1.07
CIRBP-220ENST00000588917 TRIM43BA6NCK2 446 aa21.75■■□□□ 1.07
CIRBP-220ENST00000588917 CKBP12277 381 aa21.75■■□□□ 1.07
CIRBP-220ENST00000588917 SELPP16109 830 aa21.75■■□□□ 1.07
CIRBP-220ENST00000588917 EMC2Q15006 297 aa21.75■■□□□ 1.07
CIRBP-220ENST00000588917 TRIM71Q2Q1W2 868 aaKnown RBP21.75■■□□□ 1.07
CIRBP-220ENST00000588917 RUFY4Q6ZNE9 571 aa21.75■■□□□ 1.07
CIRBP-220ENST00000588917 SV2BQ7L1I2 683 aa21.75■■□□□ 1.07
CIRBP-220ENST00000588917 TMEM199Q8N511 208 aa21.75■■□□□ 1.07
CIRBP-220ENST00000588917 LINC01465Q8N7H1 131 aa21.75■■□□□ 1.07
CIRBP-220ENST00000588917 LARP4BQ92615 738 aaKnown RBP21.75■■□□□ 1.07
CIRBP-220ENST00000588917 TRIM43Q96BQ3 446 aaPredicted RBP21.75■■□□□ 1.07
CIRBP-220ENST00000588917 FAM49AQ9H0Q0 323 aaPredicted RBP21.75■■□□□ 1.07
CIRBP-220ENST00000588917 BMP2KQ9NSY1 1161 aaPredicted RBP21.75■■□□□ 1.07
CIRBP-220ENST00000588917 USP25Q9UHP3 1055 aa21.75■■□□□ 1.07
CIRBP-220ENST00000588917 KCNG1Q9UIX4 513 aa21.75■■□□□ 1.07
CIRBP-220ENST00000588917 FAM237AA0A1B0GTK4 181 aa21.74■■□□□ 1.07
CIRBP-220ENST00000588917 SSBP05455 408 aaKnown RBP eCLIP21.74■■□□□ 1.07
CIRBP-220ENST00000588917 SLC12A3P55017 1021 aa21.74■■□□□ 1.07
CIRBP-220ENST00000588917 AMPD3Q01432 767 aa21.74■■□□□ 1.07
CIRBP-220ENST00000588917 MXD4Q14582 209 aaPredicted RBP21.74■■□□□ 1.07
CIRBP-220ENST00000588917 FAM26DQ5JW98 314 aa21.74■■□□□ 1.07
CIRBP-220ENST00000588917 KCNK18Q7Z418 384 aa21.74■■□□□ 1.07
CIRBP-220ENST00000588917 SH3RF1Q7Z6J0 888 aa21.74■■□□□ 1.07
CIRBP-220ENST00000588917 LRRC71Q8N4P6 559 aa21.74■■□□□ 1.07
CIRBP-220ENST00000588917 PDILTQ8N807 584 aa21.74■■□□□ 1.07
CIRBP-220ENST00000588917 TMEM87AQ8NBN3 555 aa21.74■■□□□ 1.07
CIRBP-220ENST00000588917 PSPC1Q8WXF1 523 aaKnown RBP21.74■■□□□ 1.07
CIRBP-220ENST00000588917 MRPS27Q92552 414 aaKnown RBP21.74■■□□□ 1.07
CIRBP-220ENST00000588917 DHX38Q92620 1227 aaKnown RBP21.74■■□□□ 1.07
CIRBP-220ENST00000588917 MAGEF1Q9HAY2 307 aa21.74■■□□□ 1.07
CIRBP-220ENST00000588917 SUCLA2Q9P2R7 463 aaPredicted RBP21.74■■□□□ 1.07
CIRBP-220ENST00000588917 AKT3Q9Y243 479 aa21.74■■□□□ 1.07
CIRBP-220ENST00000588917 KAT6AQ92794 2004 aa21.73■■□□□ 1.07
CIRBP-220ENST00000588917 WDR81Q562E7 1941 aa21.73■■□□□ 1.07
CIRBP-220ENST00000588917 RSPH10B2B2RC85 870 aa21.73■■□□□ 1.07
CIRBP-220ENST00000588917 POLR2DO15514 142 aaKnown RBP21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 163 ms