RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 SMIM10L2AP0DMW4 78 aa11.59□□□□□ -0.55
CCDC47-203ENST00000580986 SMIM10L2BP0DMW5 78 aa11.59□□□□□ -0.55
CCDC47-203ENST00000580986 INSRRP14616 1297 aa11.59□□□□□ -0.55
CCDC47-203ENST00000580986 MARK3P27448 753 aa11.59□□□□□ -0.55
CCDC47-203ENST00000580986 STAT6P42226 847 aa11.59□□□□□ -0.55
CCDC47-203ENST00000580986 SYKP43405 635 aa11.59□□□□□ -0.55
CCDC47-203ENST00000580986 NDUFA8P51970 172 aa11.59□□□□□ -0.55
CCDC47-203ENST00000580986 SLC12A3P55017 1021 aa11.59□□□□□ -0.55
CCDC47-203ENST00000580986 PPFIA1Q13136 1202 aa11.59□□□□□ -0.55
CCDC47-203ENST00000580986 NBPF20Q3BBV1 942 aa11.59□□□□□ -0.55
CCDC47-203ENST00000580986 CNNM4Q6P4Q7 775 aa11.59□□□□□ -0.55
CCDC47-203ENST00000580986 ANKRD33Q7Z3H0 272 aa11.59□□□□□ -0.55
CCDC47-203ENST00000580986 RPAINQ86UA6 219 aa11.59□□□□□ -0.55
CCDC47-203ENST00000580986 FMR1NBQ8N0W7 255 aaPredicted RBP11.59□□□□□ -0.55
CCDC47-203ENST00000580986 RASSF8Q8NHQ8 419 aa11.59□□□□□ -0.55
CCDC47-203ENST00000580986 RAD54LQ92698 747 aa11.59□□□□□ -0.55
CCDC47-203ENST00000580986 RNF25Q96BH1 459 aaPredicted RBP11.59□□□□□ -0.55
CCDC47-203ENST00000580986 CCDC34Q96HJ3 373 aa11.59□□□□□ -0.55
CCDC47-203ENST00000580986 TOX2Q96NM4 488 aa11.59□□□□□ -0.55
CCDC47-203ENST00000580986 LRRC27Q9C0I9 530 aa11.59□□□□□ -0.55
CCDC47-203ENST00000580986 DHX33Q9H6R0 707 aaKnown RBP11.59□□□□□ -0.55
CCDC47-203ENST00000580986 KBTBD4Q9NVX7 518 aa11.59□□□□□ -0.55
CCDC47-203ENST00000580986 SEPT9Q9UHD8 586 aaPredicted RBP11.59□□□□□ -0.55
CCDC47-203ENST00000580986 KAT6AQ92794 2004 aa11.59□□□□□ -0.55
CCDC47-203ENST00000580986 A0A1B0GVL5 298 aa11.58□□□□□ -0.56
CCDC47-203ENST00000580986 C17orf102A2RUQ5 167 aa11.58□□□□□ -0.56
CCDC47-203ENST00000580986 ARHGEF35A5YM69 484 aa11.58□□□□□ -0.56
CCDC47-203ENST00000580986 POLR2DO15514 142 aaKnown RBP11.58□□□□□ -0.56
CCDC47-203ENST00000580986 CAND2O75155 1236 aa11.58□□□□□ -0.56
CCDC47-203ENST00000580986 PRPF40AO75400 957 aaKnown RBP11.58□□□□□ -0.56
CCDC47-203ENST00000580986 MAFO75444 373 aaPredicted RBP11.58□□□□□ -0.56
CCDC47-203ENST00000580986 SLFN14P0C7P3 912 aa11.58□□□□□ -0.56
CCDC47-203ENST00000580986 GUCY2CP25092 1073 aa11.58□□□□□ -0.56
CCDC47-203ENST00000580986 MCM4P33991 863 aa11.58□□□□□ -0.56
CCDC47-203ENST00000580986 PSMC6P62333 389 aa11.58□□□□□ -0.56
CCDC47-203ENST00000580986 AMPD3Q01432 767 aa11.58□□□□□ -0.56
CCDC47-203ENST00000580986 RBL2Q08999 1139 aa11.58□□□□□ -0.56
CCDC47-203ENST00000580986 SNW1Q13573 536 aaKnown RBP11.58□□□□□ -0.56
CCDC47-203ENST00000580986 GRIK4Q16099 956 aa11.58□□□□□ -0.56
CCDC47-203ENST00000580986 KANK3Q6NY19 840 aa11.58□□□□□ -0.56
CCDC47-203ENST00000580986 TAF2Q6P1X5 1199 aa11.58□□□□□ -0.56
CCDC47-203ENST00000580986 KCNK18Q7Z418 384 aa11.58□□□□□ -0.56
CCDC47-203ENST00000580986 TNS4Q8IZW8 715 aa11.58□□□□□ -0.56
CCDC47-203ENST00000580986 LINC01465Q8N7H1 131 aa11.58□□□□□ -0.56
CCDC47-203ENST00000580986 RETREG2Q8NC44 543 aa11.58□□□□□ -0.56
CCDC47-203ENST00000580986 MCPH1Q8NEM0 835 aa11.58□□□□□ -0.56
CCDC47-203ENST00000580986 PIGOQ8TEQ8 1089 aa11.58□□□□□ -0.56
CCDC47-203ENST00000580986 LMBR1Q8WVP7 490 aa11.58□□□□□ -0.56
CCDC47-203ENST00000580986 SLC7A3Q8WY07 619 aa11.58□□□□□ -0.56
CCDC47-203ENST00000580986 CEP170P1Q96L14 293 aa11.58□□□□□ -0.56
CCDC47-203ENST00000580986 CCDC43Q96MW1 224 aaKnown RBP11.58□□□□□ -0.56
CCDC47-203ENST00000580986 BHMT2Q9H2M3 363 aa11.58□□□□□ -0.56
CCDC47-203ENST00000580986 GOLPH3LQ9H4A5 285 aa11.58□□□□□ -0.56
CCDC47-203ENST00000580986 C11orf49Q9H6J7 331 aa11.58□□□□□ -0.56
CCDC47-203ENST00000580986 PDLIM7Q9NR12 457 aa11.58□□□□□ -0.56
CCDC47-203ENST00000580986 HDAC6Q9UBN7 1215 aa11.58□□□□□ -0.56
CCDC47-203ENST00000580986 TUBE1Q9UJT0 475 aa11.58□□□□□ -0.56
CCDC47-203ENST00000580986 SMIM35A0A1B0GVV1 85 aa11.57□□□□□ -0.56
CCDC47-203ENST00000580986 E9PMD0 336 aa11.57□□□□□ -0.56
CCDC47-203ENST00000580986 ACTN4O43707 911 aaKnown RBP11.57□□□□□ -0.56
CCDC47-203ENST00000580986 GADD45BO75293 160 aaPredicted RBP11.57□□□□□ -0.56
CCDC47-203ENST00000580986 ZNF202O95125 648 aa11.57□□□□□ -0.56
CCDC47-203ENST00000580986 C22orf31O95567 290 aa11.57□□□□□ -0.56
CCDC47-203ENST00000580986 MBD3O95983 291 aa11.57□□□□□ -0.56
CCDC47-203ENST00000580986 PLA2G4BP0C869 781 aa11.57□□□□□ -0.56
CCDC47-203ENST00000580986 CYP11B2P19099 503 aa11.57□□□□□ -0.56
CCDC47-203ENST00000580986 RTP1P59025 263 aa11.57□□□□□ -0.56
CCDC47-203ENST00000580986 CDC42EP1Q00587 391 aa11.57□□□□□ -0.56
CCDC47-203ENST00000580986 TBC1D8BQ0IIM8 1120 aa11.57□□□□□ -0.56
CCDC47-203ENST00000580986 XKR9Q5GH70 373 aa11.57□□□□□ -0.56
CCDC47-203ENST00000580986 MARCH8Q5T0T0 291 aa11.57□□□□□ -0.56
CCDC47-203ENST00000580986 SLC39A5Q6ZMH5 540 aa11.57□□□□□ -0.56
CCDC47-203ENST00000580986 SV2BQ7L1I2 683 aa11.57□□□□□ -0.56
CCDC47-203ENST00000580986 SERINC5Q86VE9 423 aa11.57□□□□□ -0.56
CCDC47-203ENST00000580986 CEP57L1Q8IYX8 460 aa11.57□□□□□ -0.56
CCDC47-203ENST00000580986 LRRC15Q8TF66 581 aa11.57□□□□□ -0.56
CCDC47-203ENST00000580986 KCNN1Q92952 543 aa11.57□□□□□ -0.56
CCDC47-203ENST00000580986 PAWRQ96IZ0 340 aaKnown RBP11.57□□□□□ -0.56
CCDC47-203ENST00000580986 SENP6Q9GZR1 1112 aaPredicted RBP11.57□□□□□ -0.56
CCDC47-203ENST00000580986 C17orf75Q9HAS0 396 aa11.57□□□□□ -0.56
CCDC47-203ENST00000580986 ODF2LQ9ULJ1 636 aa11.57□□□□□ -0.56
CCDC47-203ENST00000580986 PCDHA2Q9Y5H9 948 aa11.57□□□□□ -0.56
CCDC47-203ENST00000580986 MKI67P46013 3256 aaKnown RBP11.56□□□□□ -0.56
CCDC47-203ENST00000580986 ZBTB39O15060 712 aa11.56□□□□□ -0.56
CCDC47-203ENST00000580986 CD4P01730 458 aa11.56□□□□□ -0.56
CCDC47-203ENST00000580986 EN2P19622 333 aaPredicted RBP11.56□□□□□ -0.56
CCDC47-203ENST00000580986 SCP2P22307 547 aa11.56□□□□□ -0.56
CCDC47-203ENST00000580986 TMOD1P28289 359 aa11.56□□□□□ -0.56
CCDC47-203ENST00000580986 POLGP54098 1239 aaPredicted RBP11.56□□□□□ -0.56
CCDC47-203ENST00000580986 NPEPPSP55786 919 aa11.56□□□□□ -0.56
CCDC47-203ENST00000580986 PTK7Q13308 1070 aa11.56□□□□□ -0.56
CCDC47-203ENST00000580986 MTERF2Q49AM1 385 aa11.56□□□□□ -0.56
CCDC47-203ENST00000580986 PLA2G4FQ68DD2 849 aa11.56□□□□□ -0.56
CCDC47-203ENST00000580986 GDF6Q6KF10 455 aaPredicted RBP11.56□□□□□ -0.56
CCDC47-203ENST00000580986 RINT1Q6NUQ1 792 aa11.56□□□□□ -0.56
CCDC47-203ENST00000580986 PADI6Q6TGC4 694 aa11.56□□□□□ -0.56
CCDC47-203ENST00000580986 MTHFD1LQ6UB35 978 aa11.56□□□□□ -0.56
CCDC47-203ENST00000580986 KRBA2Q6ZNG9 492 aa11.56□□□□□ -0.56
CCDC47-203ENST00000580986 FAM43BQ6ZT52 329 aaPredicted RBP11.56□□□□□ -0.56
CCDC47-203ENST00000580986 C1orf186Q6ZWK4 172 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms