RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 NYAP1Q6ZVC0 841 aa11.48□□□□□ -0.57
SEC22B-201ENST00000578049 JAK3P52333 1124 aa11.48□□□□□ -0.57
SEC22B-201ENST00000578049 C1orf146Q5VVC0 180 aa11.48□□□□□ -0.57
SEC22B-201ENST00000578049 FRMD5Q7Z6J6 570 aa11.48□□□□□ -0.57
SEC22B-201ENST00000578049 SESTD1Q86VW0 696 aa11.48□□□□□ -0.57
SEC22B-201ENST00000578049 ERICH1Q86X53 443 aa11.48□□□□□ -0.57
SEC22B-201ENST00000578049 ABTB1Q969K4 478 aaPredicted RBP11.48□□□□□ -0.57
SEC22B-201ENST00000578049 CEP170P1Q96L14 293 aa11.48□□□□□ -0.57
SEC22B-201ENST00000578049 KCNF1Q9H3M0 494 aa11.48□□□□□ -0.57
SEC22B-201ENST00000578049 SLC38A10Q9HBR0 1119 aa11.48□□□□□ -0.57
SEC22B-201ENST00000578049 PALLDQ8WX93 1383 aa11.48□□□□□ -0.57
SEC22B-201ENST00000578049 COBLO75128 1261 aa11.48□□□□□ -0.57
SEC22B-201ENST00000578049 NCF2P19878 526 aaPredicted RBP11.48□□□□□ -0.57
SEC22B-201ENST00000578049 RASGRF1Q13972 1273 aa11.48□□□□□ -0.57
SEC22B-201ENST00000578049 CC2D2BQ6DHV5 1058 aa11.48□□□□□ -0.57
SEC22B-201ENST00000578049 DEPDC1BQ8WUY9 529 aa11.48□□□□□ -0.57
SEC22B-201ENST00000578049 CCT8L2Q96SF2 557 aa11.48□□□□□ -0.57
SEC22B-201ENST00000578049 BHMT2Q9H2M3 363 aa11.48□□□□□ -0.57
SEC22B-201ENST00000578049 ANAPC7Q9UJX3 599 aa11.48□□□□□ -0.57
SEC22B-201ENST00000578049 EEF1B2P24534 225 aaKnown RBP11.48□□□□□ -0.57
SEC22B-201ENST00000578049 TBXAS1P24557 533 aaPredicted RBP11.48□□□□□ -0.57
SEC22B-201ENST00000578049 TAP1Q03518 808 aa11.48□□□□□ -0.57
SEC22B-201ENST00000578049 MAPRE2Q15555 327 aa11.48□□□□□ -0.57
SEC22B-201ENST00000578049 USPL1Q5W0Q7 1092 aa11.48□□□□□ -0.57
SEC22B-201ENST00000578049 NFRKBQ6P4R8 1299 aa11.48□□□□□ -0.57
SEC22B-201ENST00000578049 SPATA21Q7Z572 469 aa11.48□□□□□ -0.57
SEC22B-201ENST00000578049 DCAF4Q8WV16 495 aa11.48□□□□□ -0.57
SEC22B-201ENST00000578049 CNKSR1Q969H4 720 aa11.48□□□□□ -0.57
SEC22B-201ENST00000578049 ROPN1BQ9BZX4 212 aaPredicted RBP11.48□□□□□ -0.57
SEC22B-201ENST00000578049 ROPN1Q9HAT0 212 aaPredicted RBP11.48□□□□□ -0.57
SEC22B-201ENST00000578049 DDX56Q9NY93 547 aaKnown RBP11.48□□□□□ -0.57
SEC22B-201ENST00000578049 GOLGA8SH3BPF8 625 aa11.48□□□□□ -0.57
SEC22B-201ENST00000578049 SRGAP2O75044 1071 aa11.48□□□□□ -0.57
SEC22B-201ENST00000578049 TMED1Q13445 227 aa11.48□□□□□ -0.57
SEC22B-201ENST00000578049 KNOP1Q1ED39 458 aaKnown RBP11.48□□□□□ -0.57
SEC22B-201ENST00000578049 SYDE2Q5VT97 1194 aa11.48□□□□□ -0.57
SEC22B-201ENST00000578049 SHC4Q6S5L8 630 aa11.48□□□□□ -0.57
SEC22B-201ENST00000578049 ARMCX2Q7L311 632 aa11.48□□□□□ -0.57
SEC22B-201ENST00000578049 PIH1D3Q9NQM4 214 aaKnown RBP11.48□□□□□ -0.57
SEC22B-201ENST00000578049 FBXL5Q9UKA1 691 aa11.48□□□□□ -0.57
SEC22B-201ENST00000578049 ANGPTL3Q9Y5C1 460 aa11.48□□□□□ -0.57
SEC22B-201ENST00000578049 MYO5CQ9NQX4 1742 aa11.47□□□□□ -0.57
SEC22B-201ENST00000578049 ASAP2O43150 1006 aa11.47□□□□□ -0.57
SEC22B-201ENST00000578049 SLC1A1P43005 524 aa11.47□□□□□ -0.57
SEC22B-201ENST00000578049 ADCY1Q08828 1119 aa11.47□□□□□ -0.57
SEC22B-201ENST00000578049 MMGT1Q8N4V1 131 aa11.47□□□□□ -0.57
SEC22B-201ENST00000578049 METTL13Q8N6R0 699 aa11.47□□□□□ -0.57
SEC22B-201ENST00000578049 SPC25Q9HBM1 224 aa11.47□□□□□ -0.57
SEC22B-201ENST00000578049 ZHX2Q9Y6X8 837 aa11.47□□□□□ -0.57
SEC22B-201ENST00000578049 ERBB3P21860 1342 aa11.47□□□□□ -0.57
SEC22B-201ENST00000578049 ESYT2A0FGR8 921 aa11.47□□□□□ -0.57
SEC22B-201ENST00000578049 PALM3A6NDB9 673 aaPredicted RBP11.47□□□□□ -0.57
SEC22B-201ENST00000578049 ELF1P32519 619 aa11.47□□□□□ -0.57
SEC22B-201ENST00000578049 CA8P35219 290 aa11.47□□□□□ -0.57
SEC22B-201ENST00000578049 MRPS35P82673 323 aaKnown RBP11.47□□□□□ -0.57
SEC22B-201ENST00000578049 PTPN21Q16825 1174 aa11.47□□□□□ -0.57
SEC22B-201ENST00000578049 GRAMD4Q6IC98 578 aa11.47□□□□□ -0.57
SEC22B-201ENST00000578049 SUGCTQ9HAC7 445 aa11.47□□□□□ -0.57
SEC22B-201ENST00000578049 STK32BQ9NY57 414 aa11.47□□□□□ -0.57
SEC22B-201ENST00000578049 PNPLA6Q8IY17 1366 aa11.47□□□□□ -0.57
SEC22B-201ENST00000578049 UGGT1Q9NYU2 1555 aa11.47□□□□□ -0.57
SEC22B-201ENST00000578049 PRKAB2O43741 272 aa11.47□□□□□ -0.57
SEC22B-201ENST00000578049 CORO7P57737 925 aa11.47□□□□□ -0.57
SEC22B-201ENST00000578049 DNAL1Q4LDG9 190 aa11.47□□□□□ -0.57
SEC22B-201ENST00000578049 RARS2Q5T160 578 aaKnown RBP11.47□□□□□ -0.57
SEC22B-201ENST00000578049 FAM47EQ6ZV65 393 aa11.47□□□□□ -0.57
SEC22B-201ENST00000578049 RHOT1Q8IXI2 618 aa11.47□□□□□ -0.57
SEC22B-201ENST00000578049 UIMC1Q96RL1 719 aa11.47□□□□□ -0.57
SEC22B-201ENST00000578049 MTRQ99707 1265 aa11.47□□□□□ -0.57
SEC22B-201ENST00000578049 DDX47Q9H0S4 455 aaKnown RBP11.47□□□□□ -0.57
SEC22B-201ENST00000578049 LY9Q9HBG7 655 aa11.47□□□□□ -0.57
SEC22B-201ENST00000578049 TEX33O43247 280 aa11.47□□□□□ -0.57
SEC22B-201ENST00000578049 ZSCAN20P17040 1043 aaPredicted RBP11.47□□□□□ -0.57
SEC22B-201ENST00000578049 PPARGP37231 505 aaPredicted RBP11.47□□□□□ -0.57
SEC22B-201ENST00000578049 PDIA5Q14554 519 aa11.47□□□□□ -0.57
SEC22B-201ENST00000578049 TTC17Q96AE7 1141 aa11.47□□□□□ -0.57
SEC22B-201ENST00000578049 ECT2Q9H8V3 914 aa11.47□□□□□ -0.57
SEC22B-201ENST00000578049 NUB1Q9Y5A7 615 aa11.47□□□□□ -0.57
SEC22B-201ENST00000578049 PAMP19021 973 aa11.47□□□□□ -0.57
SEC22B-201ENST00000578049 SAT1P21673 171 aa11.47□□□□□ -0.57
SEC22B-201ENST00000578049 EXOSC10Q01780 885 aaKnown RBP11.47□□□□□ -0.57
SEC22B-201ENST00000578049 CCNYQ8ND76 341 aa11.47□□□□□ -0.57
SEC22B-201ENST00000578049 TTLL11Q8NHH1 800 aa11.47□□□□□ -0.57
SEC22B-201ENST00000578049 FAM149B1Q96BN6 582 aa11.47□□□□□ -0.57
SEC22B-201ENST00000578049 YIPF3Q9GZM5 350 aa11.47□□□□□ -0.57
SEC22B-201ENST00000578049 SMYD2Q9NRG4 433 aa11.47□□□□□ -0.57
SEC22B-201ENST00000578049 LOC102724428A0A0B4J2F2 783 aa11.46□□□□□ -0.57
SEC22B-201ENST00000578049 A0A1W2PQJ5 194 aa11.46□□□□□ -0.57
SEC22B-201ENST00000578049 STXBP3O00186 592 aa11.46□□□□□ -0.57
SEC22B-201ENST00000578049 GSTA4O15217 222 aa11.46□□□□□ -0.57
SEC22B-201ENST00000578049 PPIP5K2O43314 1243 aa11.46□□□□□ -0.57
SEC22B-201ENST00000578049 SRGNP10124 158 aa11.46□□□□□ -0.57
SEC22B-201ENST00000578049 RAD23BP54727 409 aa11.46□□□□□ -0.57
SEC22B-201ENST00000578049 HDAC4P56524 1084 aa11.46□□□□□ -0.57
SEC22B-201ENST00000578049 SIK1P57059 783 aa11.46□□□□□ -0.57
SEC22B-201ENST00000578049 NAA30Q147X3 362 aaPredicted RBP11.46□□□□□ -0.57
SEC22B-201ENST00000578049 SLC18A3Q16572 532 aa11.46□□□□□ -0.57
SEC22B-201ENST00000578049 CLEC4GQ6UXB4 293 aa11.46□□□□□ -0.57
SEC22B-201ENST00000578049 ZNF473Q8WTR7 871 aaKnown RBP11.46□□□□□ -0.57
SEC22B-201ENST00000578049 FGD4Q96M96 766 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms