RNA–Protein interactions for RNA: ENST00000567539.5

MTHFSD-215, Transcript of methenyltetrahydrofolate synthetase domain containing, humanhuman

TSL 4

Gene MTHFSD, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFSD-215ENST00000567539 DSC3Q14574 896 aa13.4□□□□□ -0.26
MTHFSD-215ENST00000567539 SMC1AQ14683 1233 aaKnown RBP13.4□□□□□ -0.26
MTHFSD-215ENST00000567539 KIZQ2M2Z5 673 aa13.4□□□□□ -0.26
MTHFSD-215ENST00000567539 CEP55Q53EZ4 464 aa13.4□□□□□ -0.26
MTHFSD-215ENST00000567539 ZNF484Q5JVG2 852 aa13.4□□□□□ -0.26
MTHFSD-215ENST00000567539 FAM160B1Q5W0V3 765 aa13.4□□□□□ -0.26
MTHFSD-215ENST00000567539 MCTP2Q6DN12 878 aa13.4□□□□□ -0.26
MTHFSD-215ENST00000567539 NFXL1Q6ZNB6 911 aa13.4□□□□□ -0.26
MTHFSD-215ENST00000567539 FAM228AQ86W67 206 aa13.4□□□□□ -0.26
MTHFSD-215ENST00000567539 TEX2Q8IWB9 1127 aa13.4□□□□□ -0.26
MTHFSD-215ENST00000567539 CMTR1Q8N1G2 835 aaKnown RBP13.4□□□□□ -0.26
MTHFSD-215ENST00000567539 LRRC43Q8N309 656 aa13.4□□□□□ -0.26
MTHFSD-215ENST00000567539 CYP2W1Q8TAV3 490 aa13.4□□□□□ -0.26
MTHFSD-215ENST00000567539 NKD2Q969F2 451 aaPredicted RBP13.4□□□□□ -0.26
MTHFSD-215ENST00000567539 CASD1Q96PB1 797 aa13.4□□□□□ -0.26
MTHFSD-215ENST00000567539 OSMRQ99650 979 aa13.4□□□□□ -0.26
MTHFSD-215ENST00000567539 AGO4Q9HCK5 861 aaKnown RBP13.4□□□□□ -0.26
MTHFSD-215ENST00000567539 SPG21Q9NZD8 308 aa13.4□□□□□ -0.26
MTHFSD-215ENST00000567539 HCFC2Q9Y5Z7 792 aa13.4□□□□□ -0.26
MTHFSD-215ENST00000567539 CLCN5P51795 746 aa13.39□□□□□ -0.27
MTHFSD-215ENST00000567539 ABHD15Q6UXT9 468 aa13.39□□□□□ -0.27
MTHFSD-215ENST00000567539 LRRC55Q6ZSA7 311 aa13.39□□□□□ -0.27
MTHFSD-215ENST00000567539 HEATR3Q7Z4Q2 680 aa13.39□□□□□ -0.27
MTHFSD-215ENST00000567539 ZDHHC14Q8IZN3 488 aa13.39□□□□□ -0.27
MTHFSD-215ENST00000567539 ABI1Q8IZP0 508 aa13.39□□□□□ -0.27
MTHFSD-215ENST00000567539 MRPL43Q8N983 215 aaKnown RBP13.39□□□□□ -0.27
MTHFSD-215ENST00000567539 MFSD1Q9H3U5 465 aa13.39□□□□□ -0.27
MTHFSD-215ENST00000567539 CDH22Q9UJ99 828 aa13.39□□□□□ -0.27
MTHFSD-215ENST00000567539 FNDC1Q4ZHG4 1894 aaPredicted RBP13.39□□□□□ -0.27
MTHFSD-215ENST00000567539 SPTBN4Q9H254 2564 aa13.39□□□□□ -0.27
MTHFSD-215ENST00000567539 PTPRZ1P23471 2315 aaPredicted RBP13.38□□□□□ -0.27
MTHFSD-215ENST00000567539 hCG_1642624A0A1W2PR95 340 aa13.38□□□□□ -0.27
MTHFSD-215ENST00000567539 C2orf71A6NGG8 1288 aa13.38□□□□□ -0.27
MTHFSD-215ENST00000567539 ZBTB42B2RXF5 422 aa13.38□□□□□ -0.27
MTHFSD-215ENST00000567539 SH2B2O14492 632 aaPredicted RBP13.38□□□□□ -0.27
MTHFSD-215ENST00000567539 PRC1O43663 620 aa13.38□□□□□ -0.27
MTHFSD-215ENST00000567539 GPR32O75388 356 aa13.38□□□□□ -0.27
MTHFSD-215ENST00000567539 CCNE2O96020 404 aa13.38□□□□□ -0.27
MTHFSD-215ENST00000567539 FOSP01100 380 aaPredicted RBP13.38□□□□□ -0.27
MTHFSD-215ENST00000567539 GSPT1P15170 499 aaKnown RBP13.38□□□□□ -0.27
MTHFSD-215ENST00000567539 PBX3P40426 434 aa13.38□□□□□ -0.27
MTHFSD-215ENST00000567539 ID4P47928 161 aa13.38□□□□□ -0.27
MTHFSD-215ENST00000567539 BMS1Q14692 1282 aaKnown RBP13.38□□□□□ -0.27
MTHFSD-215ENST00000567539 PDXDC2PQ6P474 469 aa13.38□□□□□ -0.27
MTHFSD-215ENST00000567539 FRMD5Q7Z6J6 570 aa13.38□□□□□ -0.27
MTHFSD-215ENST00000567539 CCDC60Q8IWA6 550 aaPredicted RBP13.38□□□□□ -0.27
MTHFSD-215ENST00000567539 SLC39A11Q8N1S5 342 aa13.38□□□□□ -0.27
MTHFSD-215ENST00000567539 PLCD3Q8N3E9 789 aa13.38□□□□□ -0.27
MTHFSD-215ENST00000567539 TDRD5Q8NAT2 981 aaKnown RBP13.38□□□□□ -0.27
MTHFSD-215ENST00000567539 TMEM87BQ96K49 555 aa13.38□□□□□ -0.27
MTHFSD-215ENST00000567539 PPP1R16BQ96T49 567 aa13.38□□□□□ -0.27
MTHFSD-215ENST00000567539 ZNF302Q9NR11 478 aa13.38□□□□□ -0.27
MTHFSD-215ENST00000567539 RNF19AQ9NV58 838 aa13.38□□□□□ -0.27
MTHFSD-215ENST00000567539 USTQ9Y2C2 406 aa13.38□□□□□ -0.27
MTHFSD-215ENST00000567539 MEIS1O00470 390 aa13.37□□□□□ -0.27
MTHFSD-215ENST00000567539 CLASP2O75122 1294 aaKnown RBP13.37□□□□□ -0.27
MTHFSD-215ENST00000567539 C22orf31O95567 290 aa13.37□□□□□ -0.27
MTHFSD-215ENST00000567539 VTNP04004 478 aa13.37□□□□□ -0.27
MTHFSD-215ENST00000567539 ZSCAN20P17040 1043 aaPredicted RBP13.37□□□□□ -0.27
MTHFSD-215ENST00000567539 RXRAP19793 462 aa13.37□□□□□ -0.27
MTHFSD-215ENST00000567539 CHMLP26374 656 aa13.37□□□□□ -0.27
MTHFSD-215ENST00000567539 MCM5P33992 734 aa13.37□□□□□ -0.27
MTHFSD-215ENST00000567539 LIFRP42702 1097 aa13.37□□□□□ -0.27
MTHFSD-215ENST00000567539 TTC22Q5TAA0 569 aa13.37□□□□□ -0.27
MTHFSD-215ENST00000567539 KIAA1841Q6NSI8 718 aa13.37□□□□□ -0.27
MTHFSD-215ENST00000567539 MIS18BP1Q6P0N0 1132 aa13.37□□□□□ -0.27
MTHFSD-215ENST00000567539 TMTC3Q6ZXV5 915 aa13.37□□□□□ -0.27
MTHFSD-215ENST00000567539 NIPA1Q7RTP0 329 aa13.37□□□□□ -0.27
MTHFSD-215ENST00000567539 CCDC82Q8N4S0 544 aa13.37□□□□□ -0.27
MTHFSD-215ENST00000567539 METTL13Q8N6R0 699 aa13.37□□□□□ -0.27
MTHFSD-215ENST00000567539 BBXQ8WY36 941 aaPredicted RBP13.37□□□□□ -0.27
MTHFSD-215ENST00000567539 MAP4K1Q92918 833 aa13.37□□□□□ -0.27
MTHFSD-215ENST00000567539 ANO3Q9BYT9 981 aa13.37□□□□□ -0.27
MTHFSD-215ENST00000567539 SMOC2Q9H3U7 446 aa13.37□□□□□ -0.27
MTHFSD-215ENST00000567539 RIC8AQ9NPQ8 531 aa13.37□□□□□ -0.27
MTHFSD-215ENST00000567539 DZANK1Q9NVP4 752 aa13.37□□□□□ -0.27
MTHFSD-215ENST00000567539 VPS13AQ96RL7 3174 aa13.37□□□□□ -0.27
MTHFSD-215ENST00000567539 DDX39AO00148 427 aaKnown RBP13.36□□□□□ -0.27
MTHFSD-215ENST00000567539 SGSM2O43147 1006 aa13.36□□□□□ -0.27
MTHFSD-215ENST00000567539 ASGR2P07307 311 aa13.36□□□□□ -0.27
MTHFSD-215ENST00000567539 ATP4AP20648 1035 aa13.36□□□□□ -0.27
MTHFSD-215ENST00000567539 CA8P35219 290 aa13.36□□□□□ -0.27
MTHFSD-215ENST00000567539 SREBF1P36956 1147 aa13.36□□□□□ -0.27
MTHFSD-215ENST00000567539 NAPAP54920 295 aa13.36□□□□□ -0.27
MTHFSD-215ENST00000567539 ATAT1Q5SQI0 421 aa13.36□□□□□ -0.27
MTHFSD-215ENST00000567539 RARS2Q5T160 578 aaKnown RBP13.36□□□□□ -0.27
MTHFSD-215ENST00000567539 WWC2Q6AWC2 1192 aa13.36□□□□□ -0.27
MTHFSD-215ENST00000567539 SWSAP1Q6NVH7 229 aa13.36□□□□□ -0.27
MTHFSD-215ENST00000567539 PPP1R18Q6NYC8 613 aa13.36□□□□□ -0.27
MTHFSD-215ENST00000567539 ECHDC2Q86YB7 292 aa13.36□□□□□ -0.27
MTHFSD-215ENST00000567539 CKAP2LQ8IYA6 745 aa13.36□□□□□ -0.27
MTHFSD-215ENST00000567539 ADSSL1Q8N142 457 aa13.36□□□□□ -0.27
MTHFSD-215ENST00000567539 ZNF710Q8N1W2 664 aa13.36□□□□□ -0.27
MTHFSD-215ENST00000567539 FANCBQ8NB91 859 aa13.36□□□□□ -0.27
MTHFSD-215ENST00000567539 PGBD1Q96JS3 809 aa13.36□□□□□ -0.27
MTHFSD-215ENST00000567539 MRPL9Q9BYD2 267 aaKnown RBP13.36□□□□□ -0.27
MTHFSD-215ENST00000567539 LIMD1Q9UGP4 676 aa13.36□□□□□ -0.27
MTHFSD-215ENST00000567539 DBR1Q9UK59 544 aaKnown RBP13.36□□□□□ -0.27
MTHFSD-215ENST00000567539 SLC12A7Q9Y666 1083 aa13.36□□□□□ -0.27
MTHFSD-215ENST00000567539 RIF1Q5UIP0 2472 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms