RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 CSDE1O75534 798 aaKnown RBP20.01■□□□□ 0.79
HDDC3-205ENST00000559898 RPS6KA5O75582 802 aa20.01■□□□□ 0.79
HDDC3-205ENST00000559898 DNAJB1P25685 340 aa20.01■□□□□ 0.79
HDDC3-205ENST00000559898 BMPR1AP36894 532 aa20.01■□□□□ 0.79
HDDC3-205ENST00000559898 ANAPC15P60006 121 aa20.01■□□□□ 0.79
HDDC3-205ENST00000559898 NR5A1Q13285 461 aa20.01■□□□□ 0.79
HDDC3-205ENST00000559898 TCEAL5Q5H9L2 206 aa20.01■□□□□ 0.79
HDDC3-205ENST00000559898 FAM102BQ5T8I3 360 aa20.01■□□□□ 0.79
HDDC3-205ENST00000559898 CPLX2Q6PUV4 134 aaKnown RBP20.01■□□□□ 0.79
HDDC3-205ENST00000559898 PIK3AP1Q6ZUJ8 805 aa20.01■□□□□ 0.79
HDDC3-205ENST00000559898 MIER3Q7Z3K6 550 aa20.01■□□□□ 0.79
HDDC3-205ENST00000559898 BANK1Q8NDB2 785 aa20.01■□□□□ 0.79
HDDC3-205ENST00000559898 CLP1Q92989 425 aaKnown RBP20.01■□□□□ 0.79
HDDC3-205ENST00000559898 ADAM2Q99965 735 aa20.01■□□□□ 0.79
HDDC3-205ENST00000559898 ADAMTS10Q9H324 1103 aa20.01■□□□□ 0.79
HDDC3-205ENST00000559898 WRAP73Q9P2S5 460 aaPredicted RBP20.01■□□□□ 0.79
HDDC3-205ENST00000559898 ORC3Q9UBD5 711 aaPredicted RBP20.01■□□□□ 0.79
HDDC3-205ENST00000559898 DDX25Q9UHL0 483 aaKnown RBP20.01■□□□□ 0.79
HDDC3-205ENST00000559898 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20■□□□□ 0.79
HDDC3-205ENST00000559898 GTF2F1P35269 517 aaKnown RBP eCLIP20■□□□□ 0.79
HDDC3-205ENST00000559898 NLRP11P59045 1033 aaKnown RBP20■□□□□ 0.79
HDDC3-205ENST00000559898 CAMK1Q14012 370 aa20■□□□□ 0.79
HDDC3-205ENST00000559898 TARBP2Q15633 366 aaKnown RBP20■□□□□ 0.79
HDDC3-205ENST00000559898 MTERF2Q49AM1 385 aa20■□□□□ 0.79
HDDC3-205ENST00000559898 KRT25Q7Z3Z0 450 aa20■□□□□ 0.79
HDDC3-205ENST00000559898 NPAS4Q8IUM7 802 aa20■□□□□ 0.79
HDDC3-205ENST00000559898 ZNF579Q8NAF0 562 aaKnown RBP20■□□□□ 0.79
HDDC3-205ENST00000559898 HAS1Q92839 578 aa20■□□□□ 0.79
HDDC3-205ENST00000559898 SAMD11Q96NU1 681 aa20■□□□□ 0.79
HDDC3-205ENST00000559898 UBE2ZQ9H832 354 aaPredicted RBP20■□□□□ 0.79
HDDC3-205ENST00000559898 ALG13Q9NP73 1137 aaKnown RBP20■□□□□ 0.79
HDDC3-205ENST00000559898 VAV3Q9UKW4 847 aa20■□□□□ 0.79
HDDC3-205ENST00000559898 COG5Q9UP83 839 aa20■□□□□ 0.79
HDDC3-205ENST00000559898 AKT3Q9Y243 479 aa20■□□□□ 0.79
HDDC3-205ENST00000559898 C5orf67F2Z3F1 127 aa19.99■□□□□ 0.79
HDDC3-205ENST00000559898 RPLP2P05387 115 aaKnown RBP19.99■□□□□ 0.79
HDDC3-205ENST00000559898 CRYBB1P53674 252 aaPredicted RBP19.99■□□□□ 0.79
HDDC3-205ENST00000559898 DSC3Q14574 896 aa19.99■□□□□ 0.79
HDDC3-205ENST00000559898 PLA2G4FQ68DD2 849 aa19.99■□□□□ 0.79
HDDC3-205ENST00000559898 NSUN7Q8NE18 718 aaKnown RBP19.99■□□□□ 0.79
HDDC3-205ENST00000559898 TNFRSF25Q93038 417 aa19.99■□□□□ 0.79
HDDC3-205ENST00000559898 GTF3C6Q969F1 213 aa19.99■□□□□ 0.79
HDDC3-205ENST00000559898 FTHL17Q9BXU8 183 aa19.99■□□□□ 0.79
HDDC3-205ENST00000559898 SEPT9Q9UHD8 586 aaPredicted RBP19.99■□□□□ 0.79
HDDC3-205ENST00000559898 PCDHGC5Q9Y5F6 944 aa19.99■□□□□ 0.79
HDDC3-205ENST00000559898 C9IYK1 514 aa19.98■□□□□ 0.79
HDDC3-205ENST00000559898 CDKL5O76039 1030 aa19.98■□□□□ 0.79
HDDC3-205ENST00000559898 KCNA5P22460 613 aa19.98■□□□□ 0.79
HDDC3-205ENST00000559898 SFNP31947 248 aa19.98■□□□□ 0.79
HDDC3-205ENST00000559898 SARSP49591 514 aaKnown RBP19.98■□□□□ 0.79
HDDC3-205ENST00000559898 NEK4P51957 841 aa19.98■□□□□ 0.79
HDDC3-205ENST00000559898 JAK3P52333 1124 aa19.98■□□□□ 0.79
HDDC3-205ENST00000559898 GALNT17Q6IS24 598 aa19.98■□□□□ 0.79
HDDC3-205ENST00000559898 POTEDQ86YR6 584 aa19.98■□□□□ 0.79
HDDC3-205ENST00000559898 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.98■□□□□ 0.79
HDDC3-205ENST00000559898 KHSRPQ92945 711 aaKnown RBP eCLIP19.98■□□□□ 0.79
HDDC3-205ENST00000559898 FAM167AQ96KS9 214 aa19.98■□□□□ 0.79
HDDC3-205ENST00000559898 KCNMB3Q9NPA1 279 aa19.98■□□□□ 0.79
HDDC3-205ENST00000559898 CD320Q9NPF0 282 aa19.98■□□□□ 0.79
HDDC3-205ENST00000559898 RGS18Q9NS28 235 aa19.98■□□□□ 0.79
HDDC3-205ENST00000559898 RNF19AQ9NV58 838 aa19.98■□□□□ 0.79
HDDC3-205ENST00000559898 CCDC194A0A1B0GVG4 234 aa19.97■□□□□ 0.79
HDDC3-205ENST00000559898 H3BQ06 376 aaPredicted RBP19.97■□□□□ 0.79
HDDC3-205ENST00000559898 FGFR1P11362 822 aa19.97■□□□□ 0.79
HDDC3-205ENST00000559898 GPC3P51654 580 aa19.97■□□□□ 0.79
HDDC3-205ENST00000559898 MOXD1Q6UVY6 613 aa19.97■□□□□ 0.79
HDDC3-205ENST00000559898 ANO5Q75V66 913 aa19.97■□□□□ 0.79
HDDC3-205ENST00000559898 NEK8Q86SG6 692 aa19.97■□□□□ 0.79
HDDC3-205ENST00000559898 CMTR2Q8IYT2 770 aaKnown RBP19.97■□□□□ 0.79
HDDC3-205ENST00000559898 C22orf23Q9BZE7 217 aa19.97■□□□□ 0.79
HDDC3-205ENST00000559898 NRBP2Q9NSY0 501 aa19.97■□□□□ 0.79
HDDC3-205ENST00000559898 MAGEB2O15479 319 aa19.96■□□□□ 0.79
HDDC3-205ENST00000559898 CCNT1O60563 726 aaKnown RBP19.96■□□□□ 0.79
HDDC3-205ENST00000559898 ITGB1P05556 798 aa19.96■□□□□ 0.79
HDDC3-205ENST00000559898 IRS1P35568 1242 aa19.96■□□□□ 0.79
HDDC3-205ENST00000559898 KSR1Q8IVT5 923 aa19.96■□□□□ 0.79
HDDC3-205ENST00000559898 KLHL23Q8NBE8 558 aa19.96■□□□□ 0.79
HDDC3-205ENST00000559898 IL27Q8NEV9 243 aa19.96■□□□□ 0.79
HDDC3-205ENST00000559898 NIFKQ9BYG3 293 aaKnown RBP19.96■□□□□ 0.79
HDDC3-205ENST00000559898 PLAGL2Q9UPG8 496 aa19.96■□□□□ 0.79
HDDC3-205ENST00000559898 CEP131Q9UPN4 1083 aa19.96■□□□□ 0.79
HDDC3-205ENST00000559898 ARID2Q68CP9 1835 aa19.96■□□□□ 0.79
HDDC3-205ENST00000559898 DENND3A2RUS2 1198 aa19.95■□□□□ 0.78
HDDC3-205ENST00000559898 TBKBP1A7MCY6 615 aa19.95■□□□□ 0.78
HDDC3-205ENST00000559898 DDX11L8A8MPP1 907 aa19.95■□□□□ 0.78
HDDC3-205ENST00000559898 ZBTB39O15060 712 aa19.95■□□□□ 0.78
HDDC3-205ENST00000559898 LINC01565O15544 149 aa19.95■□□□□ 0.78
HDDC3-205ENST00000559898 IL9P15248 144 aa19.95■□□□□ 0.78
HDDC3-205ENST00000559898 LTBRP36941 435 aa19.95■□□□□ 0.78
HDDC3-205ENST00000559898 NPEPPSP55786 919 aa19.95■□□□□ 0.78
HDDC3-205ENST00000559898 DLX2Q07687 328 aaPredicted RBP19.95■□□□□ 0.78
HDDC3-205ENST00000559898 TBC1D8BQ0IIM8 1120 aa19.95■□□□□ 0.78
HDDC3-205ENST00000559898 HYAL1Q12794 435 aa19.95■□□□□ 0.78
HDDC3-205ENST00000559898 PTPROQ16827 1216 aa19.95■□□□□ 0.78
HDDC3-205ENST00000559898 ADGRD2Q7Z7M1 963 aa19.95■□□□□ 0.78
HDDC3-205ENST00000559898 SPPL3Q8TCT6 385 aa19.95■□□□□ 0.78
HDDC3-205ENST00000559898 NSUN3Q9H649 340 aaKnown RBP19.95■□□□□ 0.78
HDDC3-205ENST00000559898 BMP2KQ9NSY1 1161 aaPredicted RBP19.95■□□□□ 0.78
HDDC3-205ENST00000559898 LRFN2Q9ULH4 789 aa19.95■□□□□ 0.78
HDDC3-205ENST00000559898 PCDHB7Q9Y5E2 793 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms