RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 PASD1Q8IV76 773 aa18.74■□□□□ 0.59
PTPN21-208ENST00000556564 KATNAL1Q9BW62 490 aa18.74■□□□□ 0.59
PTPN21-208ENST00000556564 NEURL4Q96JN8 1562 aa18.74■□□□□ 0.59
PTPN21-208ENST00000556564 STXBP3O00186 592 aa18.73■□□□□ 0.59
PTPN21-208ENST00000556564 SNX1Q13596 522 aa18.73■□□□□ 0.59
PTPN21-208ENST00000556564 ENOX1Q8TC92 643 aaKnown RBP18.73■□□□□ 0.59
PTPN21-208ENST00000556564 VEGFAP15692 232 aaPredicted RBP18.73■□□□□ 0.59
PTPN21-208ENST00000556564 LGSNQ5TDP6 509 aa18.73■□□□□ 0.59
PTPN21-208ENST00000556564 GDAP1L1Q96MZ0 367 aa18.73■□□□□ 0.59
PTPN21-208ENST00000556564 FBXO28Q9NVF7 368 aa18.73■□□□□ 0.59
PTPN21-208ENST00000556564 REREQ9P2R6 1566 aa18.73■□□□□ 0.59
PTPN21-208ENST00000556564 PLSCR1O15162 318 aa18.73■□□□□ 0.59
PTPN21-208ENST00000556564 RGL2O15211 777 aa18.73■□□□□ 0.59
PTPN21-208ENST00000556564 PFDN4Q9NQP4 134 aa18.73■□□□□ 0.59
PTPN21-208ENST00000556564 ELF2Q15723 593 aa18.73■□□□□ 0.59
PTPN21-208ENST00000556564 LBHD1Q9BQE6 289 aaPredicted RBP18.73■□□□□ 0.59
PTPN21-208ENST00000556564 RRP9O43818 475 aaKnown RBP18.73■□□□□ 0.59
PTPN21-208ENST00000556564 PRCPP42785 496 aa18.73■□□□□ 0.59
PTPN21-208ENST00000556564 SRGAP1Q7Z6B7 1085 aa18.73■□□□□ 0.59
PTPN21-208ENST00000556564 TEX2Q8IWB9 1127 aa18.73■□□□□ 0.59
PTPN21-208ENST00000556564 CHST13Q8NET6 341 aa18.73■□□□□ 0.59
PTPN21-208ENST00000556564 KIAA1586Q9HCI6 787 aa18.73■□□□□ 0.59
PTPN21-208ENST00000556564 KCNQ5Q9NR82 932 aa18.73■□□□□ 0.59
PTPN21-208ENST00000556564 SKA2Q8WVK7 121 aaPredicted RBP18.72■□□□□ 0.59
PTPN21-208ENST00000556564 KIF12Q96FN5 646 aa18.72■□□□□ 0.59
PTPN21-208ENST00000556564 HINFPQ9BQA5 517 aa18.72■□□□□ 0.59
PTPN21-208ENST00000556564 PHF20Q9BVI0 1012 aa18.72■□□□□ 0.59
PTPN21-208ENST00000556564 RTFDC1Q9BY42 306 aaPredicted RBP18.72■□□□□ 0.59
PTPN21-208ENST00000556564 SMARCAD1Q9H4L7 1026 aa18.72■□□□□ 0.59
PTPN21-208ENST00000556564 ARL4AP40617 200 aa18.72■□□□□ 0.59
PTPN21-208ENST00000556564 PPP4CP60510 307 aa18.72■□□□□ 0.59
PTPN21-208ENST00000556564 KRT31Q15323 416 aa18.72■□□□□ 0.59
PTPN21-208ENST00000556564 KNOP1Q1ED39 458 aaKnown RBP18.72■□□□□ 0.59
PTPN21-208ENST00000556564 TSGA10IPQ3SY00 556 aa18.72■□□□□ 0.59
PTPN21-208ENST00000556564 DENND2CQ68D51 928 aa18.72■□□□□ 0.59
PTPN21-208ENST00000556564 BBS5Q8N3I7 341 aa18.72■□□□□ 0.59
PTPN21-208ENST00000556564 HSPH1Q92598 858 aa18.72■□□□□ 0.59
PTPN21-208ENST00000556564 CALN1Q9BXU9 219 aa18.72■□□□□ 0.59
PTPN21-208ENST00000556564 AFG3L2Q9Y4W6 797 aa18.72■□□□□ 0.59
PTPN21-208ENST00000556564 ADM5C9JUS6 153 aa18.72■□□□□ 0.59
PTPN21-208ENST00000556564 ATF2P15336 505 aa18.72■□□□□ 0.59
PTPN21-208ENST00000556564 ANTXR2P58335 489 aa18.72■□□□□ 0.59
PTPN21-208ENST00000556564 ERICH1Q86X53 443 aa18.72■□□□□ 0.59
PTPN21-208ENST00000556564 TAAR1Q96RJ0 339 aa18.72■□□□□ 0.59
PTPN21-208ENST00000556564 MAD1L1Q9Y6D9 718 aa18.72■□□□□ 0.59
PTPN21-208ENST00000556564 KAZALD1Q96I82 304 aa18.72■□□□□ 0.59
PTPN21-208ENST00000556564 ALDH8A1Q9H2A2 487 aaPredicted RBP18.72■□□□□ 0.59
PTPN21-208ENST00000556564 PRPSAP2O60256 369 aa18.72■□□□□ 0.59
PTPN21-208ENST00000556564 EIF4A3P38919 411 aaKnown RBP18.72■□□□□ 0.59
PTPN21-208ENST00000556564 FAM117BQ6P1L5 589 aa18.72■□□□□ 0.59
PTPN21-208ENST00000556564 PPM1EQ8WY54 764 aa18.72■□□□□ 0.59
PTPN21-208ENST00000556564 ZWILCHQ9H900 591 aa18.72■□□□□ 0.59
PTPN21-208ENST00000556564 TUFT1Q9NNX1 390 aa18.72■□□□□ 0.59
PTPN21-208ENST00000556564 SAMD15Q9P1V8 674 aa18.72■□□□□ 0.59
PTPN21-208ENST00000556564 HAUS4Q9H6D7 363 aa18.71■□□□□ 0.59
PTPN21-208ENST00000556564 NHEJ1Q9H9Q4 299 aaPredicted RBP18.71■□□□□ 0.59
PTPN21-208ENST00000556564 PIDD1Q9HB75 910 aa18.71■□□□□ 0.59
PTPN21-208ENST00000556564 SPTLC3Q9NUV7 552 aa18.71■□□□□ 0.59
PTPN21-208ENST00000556564 MAD2L2Q9UI95 211 aa18.71■□□□□ 0.59
PTPN21-208ENST00000556564 ENC1O14682 589 aa18.71■□□□□ 0.59
PTPN21-208ENST00000556564 SERPING1P05155 500 aa18.71■□□□□ 0.59
PTPN21-208ENST00000556564 KCNJ6P48051 423 aa18.71■□□□□ 0.59
PTPN21-208ENST00000556564 IFT122Q9HBG6 1241 aa18.71■□□□□ 0.59
PTPN21-208ENST00000556564 MRPL47Q9HD33 250 aaKnown RBP18.71■□□□□ 0.59
PTPN21-208ENST00000556564 FAM217BQ9NTX9 383 aaPredicted RBP18.71■□□□□ 0.59
PTPN21-208ENST00000556564 DNAJC12Q9UKB3 198 aa18.71■□□□□ 0.59
PTPN21-208ENST00000556564 PRKCBP05771 671 aa18.71■□□□□ 0.59
PTPN21-208ENST00000556564 CPA4Q9UI42 421 aa18.71■□□□□ 0.59
PTPN21-208ENST00000556564 VAMP7P51809 220 aa18.71■□□□□ 0.59
PTPN21-208ENST00000556564 ATP2C1P98194 919 aaPredicted RBP18.71■□□□□ 0.59
PTPN21-208ENST00000556564 RWDD4Q6NW29 188 aaKnown RBP18.71■□□□□ 0.59
PTPN21-208ENST00000556564 ARFGAP2Q8N6H7 521 aa18.71■□□□□ 0.59
PTPN21-208ENST00000556564 RSPH14Q9UHP6 348 aa18.71■□□□□ 0.59
PTPN21-208ENST00000556564 DDTLA6NHG4 134 aaPredicted RBP18.7■□□□□ 0.58
PTPN21-208ENST00000556564 MOCS3O95396 460 aa18.7■□□□□ 0.58
PTPN21-208ENST00000556564 HHATQ5VTY9 493 aa18.7■□□□□ 0.58
PTPN21-208ENST00000556564 ERO1BQ86YB8 467 aa18.7■□□□□ 0.58
PTPN21-208ENST00000556564 GLIS2Q9BZE0 524 aaPredicted RBP18.7■□□□□ 0.58
PTPN21-208ENST00000556564 DDX41Q9UJV9 622 aaKnown RBP18.7■□□□□ 0.58
PTPN21-208ENST00000556564 CCDC6Q16204 474 aa18.7■□□□□ 0.58
PTPN21-208ENST00000556564 SEPT1Q8WYJ6 367 aa18.7■□□□□ 0.58
PTPN21-208ENST00000556564 SOWAHDA6NJG2 315 aa18.7■□□□□ 0.58
PTPN21-208ENST00000556564 IGSF3O75054 1194 aa18.7■□□□□ 0.58
PTPN21-208ENST00000556564 U2AF2P26368 475 aaKnown RBP eCLIP18.7■□□□□ 0.58
PTPN21-208ENST00000556564 IL1R1P14778 569 aa18.7■□□□□ 0.58
PTPN21-208ENST00000556564 TMEM270Q6UE05 265 aa18.7■□□□□ 0.58
PTPN21-208ENST00000556564 AFG1LQ8WV93 481 aa18.7■□□□□ 0.58
PTPN21-208ENST00000556564 FZD1Q9UP38 647 aa18.7■□□□□ 0.58
PTPN21-208ENST00000556564 CYP27A1Q02318 531 aa18.7■□□□□ 0.58
PTPN21-208ENST00000556564 PLA2G4FQ68DD2 849 aa18.7■□□□□ 0.58
PTPN21-208ENST00000556564 RBAKQ9NYW8 714 aaPredicted RBP18.7■□□□□ 0.58
PTPN21-208ENST00000556564 FNDC3AQ9Y2H6 1198 aaKnown RBP18.69■□□□□ 0.58
PTPN21-208ENST00000556564 CAPN2P17655 700 aa18.69■□□□□ 0.58
PTPN21-208ENST00000556564 SSTR3P32745 418 aaPredicted RBP18.69■□□□□ 0.58
PTPN21-208ENST00000556564 TSTA3Q13630 321 aaPredicted RBP18.69■□□□□ 0.58
PTPN21-208ENST00000556564 ADGRA1Q86SQ6 560 aa18.69■□□□□ 0.58
PTPN21-208ENST00000556564 ACRBPQ8NEB7 543 aa18.69■□□□□ 0.58
PTPN21-208ENST00000556564 GANCQ8TET4 914 aa18.69■□□□□ 0.58
PTPN21-208ENST00000556564 EYA4O95677 639 aa18.69■□□□□ 0.58
PTPN21-208ENST00000556564 PGK2P07205 417 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms