RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 SIGLEC16A6NMB1 481 aa11.03□□□□□ -0.64
SPIDR-224ENST00000524126 E7ENQ6 273 aa11.03□□□□□ -0.64
SPIDR-224ENST00000524126 ADAMTS3O15072 1205 aa11.03□□□□□ -0.64
SPIDR-224ENST00000524126 PFDN1O60925 122 aa11.03□□□□□ -0.64
SPIDR-224ENST00000524126 MBD4O95243 580 aa11.03□□□□□ -0.64
SPIDR-224ENST00000524126 ZCCHC18P0CG32 403 aa11.03□□□□□ -0.64
SPIDR-224ENST00000524126 EPHB2P29323 1055 aa11.03□□□□□ -0.64
SPIDR-224ENST00000524126 SFSWAPQ12872 951 aaKnown RBP11.03□□□□□ -0.64
SPIDR-224ENST00000524126 SLC29A2Q14542 456 aa11.03□□□□□ -0.64
SPIDR-224ENST00000524126 ECHDC2Q86YB7 292 aa11.03□□□□□ -0.64
SPIDR-224ENST00000524126 MIPOL1Q8TD10 442 aa11.03□□□□□ -0.64
SPIDR-224ENST00000524126 ZMYND12Q9H0C1 365 aa11.03□□□□□ -0.64
SPIDR-224ENST00000524126 MYLK2Q9H1R3 596 aa11.03□□□□□ -0.64
SPIDR-224ENST00000524126 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.02□□□□□ -0.65
SPIDR-224ENST00000524126 NPHP3-ACAD11A0A0J9YXS1 232 aa11.02□□□□□ -0.65
SPIDR-224ENST00000524126 TLR2O60603 784 aa11.02□□□□□ -0.65
SPIDR-224ENST00000524126 FCER1AP12319 257 aa11.02□□□□□ -0.65
SPIDR-224ENST00000524126 CERKLQ49MI3 558 aaPredicted RBP11.02□□□□□ -0.65
SPIDR-224ENST00000524126 NAALADL2Q58DX5 795 aa11.02□□□□□ -0.65
SPIDR-224ENST00000524126 DENND2CQ68D51 928 aa11.02□□□□□ -0.65
SPIDR-224ENST00000524126 SEPT14Q6ZU15 432 aa11.02□□□□□ -0.65
SPIDR-224ENST00000524126 DZIP3Q86Y13 1208 aaKnown RBP11.02□□□□□ -0.65
SPIDR-224ENST00000524126 ARL10Q8N8L6 244 aa11.02□□□□□ -0.65
SPIDR-224ENST00000524126 GIMAP8Q8ND71 665 aaPredicted RBP11.02□□□□□ -0.65
SPIDR-224ENST00000524126 LRRC15Q8TF66 581 aa11.02□□□□□ -0.65
SPIDR-224ENST00000524126 NRG4Q8WWG1 115 aa11.02□□□□□ -0.65
SPIDR-224ENST00000524126 PGM2Q96G03 612 aa11.02□□□□□ -0.65
SPIDR-224ENST00000524126 CRAMP1Q96RY5 1269 aa11.02□□□□□ -0.65
SPIDR-224ENST00000524126 TIPINQ9BVW5 301 aa11.02□□□□□ -0.65
SPIDR-224ENST00000524126 TJP1Q07157 1748 aa11.02□□□□□ -0.65
SPIDR-224ENST00000524126 PGRMC1O00264 195 aaKnown RBP11.02□□□□□ -0.65
SPIDR-224ENST00000524126 ZFYP08048 801 aaPredicted RBP11.02□□□□□ -0.65
SPIDR-224ENST00000524126 LIFRP42702 1097 aa11.02□□□□□ -0.65
SPIDR-224ENST00000524126 CD151P48509 253 aa11.02□□□□□ -0.65
SPIDR-224ENST00000524126 PMS2P54278 862 aa11.02□□□□□ -0.65
SPIDR-224ENST00000524126 P3H1Q32P28 736 aa11.02□□□□□ -0.65
SPIDR-224ENST00000524126 ARMCX6Q7L4S7 300 aa11.02□□□□□ -0.65
SPIDR-224ENST00000524126 ADAT2Q7Z6V5 191 aaKnown RBP11.02□□□□□ -0.65
SPIDR-224ENST00000524126 METTL13Q8N6R0 699 aa11.02□□□□□ -0.65
SPIDR-224ENST00000524126 ENDOVQ8N8Q3 282 aaKnown RBP11.02□□□□□ -0.65
SPIDR-224ENST00000524126 DENND2DQ9H6A0 471 aaPredicted RBP11.02□□□□□ -0.65
SPIDR-224ENST00000524126 PRKAG3Q9UGI9 489 aa11.02□□□□□ -0.65
SPIDR-224ENST00000524126 IQSEC3Q9UPP2 1182 aaPredicted RBP11.02□□□□□ -0.65
SPIDR-224ENST00000524126 NR2E1Q9Y466 385 aa11.02□□□□□ -0.65
SPIDR-224ENST00000524126 LOC102724428A0A0B4J2F2 783 aa11.01□□□□□ -0.65
SPIDR-224ENST00000524126 TJP3O95049 919 aa11.01□□□□□ -0.65
SPIDR-224ENST00000524126 PENKP01210 267 aaPredicted RBP11.01□□□□□ -0.65
SPIDR-224ENST00000524126 GH1P01241 217 aa11.01□□□□□ -0.65
SPIDR-224ENST00000524126 GSTA2P09210 222 aa11.01□□□□□ -0.65
SPIDR-224ENST00000524126 CCNE1P24864 410 aa11.01□□□□□ -0.65
SPIDR-224ENST00000524126 SIK1P57059 783 aa11.01□□□□□ -0.65
SPIDR-224ENST00000524126 FOXO4P98177 505 aa11.01□□□□□ -0.65
SPIDR-224ENST00000524126 KCNMA1Q12791 1236 aa11.01□□□□□ -0.65
SPIDR-224ENST00000524126 STK4Q13043 487 aa11.01□□□□□ -0.65
SPIDR-224ENST00000524126 VPS72Q15906 364 aa11.01□□□□□ -0.65
SPIDR-224ENST00000524126 PKN1Q16512 942 aa11.01□□□□□ -0.65
SPIDR-224ENST00000524126 VWA3BQ502W6 1294 aa11.01□□□□□ -0.65
SPIDR-224ENST00000524126 ZNF449Q6P9G9 518 aa11.01□□□□□ -0.65
SPIDR-224ENST00000524126 BARGINQ6ZT62 677 aa11.01□□□□□ -0.65
SPIDR-224ENST00000524126 CEP128Q6ZU80 1094 aa11.01□□□□□ -0.65
SPIDR-224ENST00000524126 AMIGO3Q86WK7 504 aa11.01□□□□□ -0.65
SPIDR-224ENST00000524126 NEK9Q8TD19 979 aa11.01□□□□□ -0.65
SPIDR-224ENST00000524126 SCG3Q8WXD2 468 aaKnown RBP11.01□□□□□ -0.65
SPIDR-224ENST00000524126 INTUQ9ULD6 942 aa11.01□□□□□ -0.65
SPIDR-224ENST00000524126 TMCO1Q9UM00 188 aa11.01□□□□□ -0.65
SPIDR-224ENST00000524126 CHMP2BQ9UQN3 213 aa11.01□□□□□ -0.65
SPIDR-224ENST00000524126 LRCH1Q9Y2L9 728 aa11.01□□□□□ -0.65
SPIDR-224ENST00000524126 A0A087X0T9 212 aa11.01□□□□□ -0.65
SPIDR-224ENST00000524126 FAM228BP0C875 321 aa11.01□□□□□ -0.65
SPIDR-224ENST00000524126 PLTPP55058 493 aa11.01□□□□□ -0.65
SPIDR-224ENST00000524126 RFWD3Q6PCD5 774 aa11.01□□□□□ -0.65
SPIDR-224ENST00000524126 PIK3AP1Q6ZUJ8 805 aa11.01□□□□□ -0.65
SPIDR-224ENST00000524126 DAAM2Q86T65 1068 aa11.01□□□□□ -0.65
SPIDR-224ENST00000524126 ANKS1AQ92625 1134 aa11.01□□□□□ -0.65
SPIDR-224ENST00000524126 PHF20Q9BVI0 1012 aa11.01□□□□□ -0.65
SPIDR-224ENST00000524126 SPATA16Q9BXB7 569 aa11.01□□□□□ -0.65
SPIDR-224ENST00000524126 VCX3BQ9H321 246 aa11.01□□□□□ -0.65
SPIDR-224ENST00000524126 SEMA4AQ9H3S1 761 aa11.01□□□□□ -0.65
SPIDR-224ENST00000524126 VCX3AQ9NNX9 186 aa11.01□□□□□ -0.65
SPIDR-224ENST00000524126 CCDC87Q9NVE4 849 aa11.01□□□□□ -0.65
SPIDR-224ENST00000524126 UTP11Q9Y3A2 253 aaKnown RBP11.01□□□□□ -0.65
SPIDR-224ENST00000524126 FAM170AA1A519 330 aa11□□□□□ -0.65
SPIDR-224ENST00000524126 PALM3A6NDB9 673 aaPredicted RBP11□□□□□ -0.65
SPIDR-224ENST00000524126 CCDC169A6NNP5 214 aa11□□□□□ -0.65
SPIDR-224ENST00000524126 TPD52L2O43399 206 aaKnown RBP11□□□□□ -0.65
SPIDR-224ENST00000524126 STARD3NLO95772 234 aa11□□□□□ -0.65
SPIDR-224ENST00000524126 NUDT17P0C025 328 aa11□□□□□ -0.65
SPIDR-224ENST00000524126 FGFR4P22455 802 aa11□□□□□ -0.65
SPIDR-224ENST00000524126 IL15P40933 162 aaPredicted RBP11□□□□□ -0.65
SPIDR-224ENST00000524126 CRKLP46109 303 aaKnown RBP11□□□□□ -0.65
SPIDR-224ENST00000524126 WTAPQ15007 396 aa11□□□□□ -0.65
SPIDR-224ENST00000524126 KHDC1Q4VXA5 237 aaKnown RBP11□□□□□ -0.65
SPIDR-224ENST00000524126 INTS5Q6P9B9 1019 aaKnown RBP11□□□□□ -0.65
SPIDR-224ENST00000524126 VSIG1Q86XK7 387 aa11□□□□□ -0.65
SPIDR-224ENST00000524126 ACTRT1Q8TDG2 376 aa11□□□□□ -0.65
SPIDR-224ENST00000524126 LRRC8CQ8TDW0 803 aa11□□□□□ -0.65
SPIDR-224ENST00000524126 SNRNP27Q8WVK2 155 aaKnown RBP11□□□□□ -0.65
SPIDR-224ENST00000524126 ERP27Q96DN0 273 aa11□□□□□ -0.65
SPIDR-224ENST00000524126 BUD13Q9BRD0 619 aaKnown RBP eCLIP11□□□□□ -0.651e-7■■□□□ 11.5
SPIDR-224ENST00000524126 TBC1D10AQ9BXI6 508 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms