RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 C2orf16Q68DN1 1984 aa15.98■□□□□ 0.15
NKX3-1-202ENST00000523261 ZFYVE26Q68DK2 2539 aa15.98■□□□□ 0.15
NKX3-1-202ENST00000523261 SMIM35A0A1B0GVV1 85 aa15.98■□□□□ 0.15
NKX3-1-202ENST00000523261 SPTLC1O15269 473 aa15.98■□□□□ 0.15
NKX3-1-202ENST00000523261 KCNA2P16389 499 aa15.98■□□□□ 0.15
NKX3-1-202ENST00000523261 CA8P35219 290 aa15.98■□□□□ 0.15
NKX3-1-202ENST00000523261 LRRC43Q8N309 656 aa15.98■□□□□ 0.15
NKX3-1-202ENST00000523261 NME8Q8N427 588 aa15.98■□□□□ 0.15
NKX3-1-202ENST00000523261 ENAHQ8N8S7 591 aaPredicted RBP15.98■□□□□ 0.15
NKX3-1-202ENST00000523261 RSAD2Q8WXG1 361 aa15.98■□□□□ 0.15
NKX3-1-202ENST00000523261 PCYT2Q99447 389 aa15.98■□□□□ 0.15
NKX3-1-202ENST00000523261 RNF41Q9H4P4 317 aaPredicted RBP15.98■□□□□ 0.15
NKX3-1-202ENST00000523261 DCTPP1Q9H773 170 aa15.98■□□□□ 0.15
NKX3-1-202ENST00000523261 ST3GAL5Q9UNP4 418 aa15.98■□□□□ 0.15
NKX3-1-202ENST00000523261 KLRF2D3W0D1 207 aa15.97■□□□□ 0.15
NKX3-1-202ENST00000523261 N4BP1O75113 896 aaKnown RBP15.97■□□□□ 0.15
NKX3-1-202ENST00000523261 GLULP15104 373 aa15.97■□□□□ 0.15
NKX3-1-202ENST00000523261 TGM1P22735 817 aa15.97■□□□□ 0.15
NKX3-1-202ENST00000523261 ACAP1Q15027 740 aa15.97■□□□□ 0.15
NKX3-1-202ENST00000523261 SLC35G1Q2M3R5 365 aa15.97■□□□□ 0.15
NKX3-1-202ENST00000523261 PCNX4Q63HM2 1172 aa15.97■□□□□ 0.15
NKX3-1-202ENST00000523261 CABP7Q86V35 215 aa15.97■□□□□ 0.15
NKX3-1-202ENST00000523261 OTUD7AQ8TE49 926 aaPredicted RBP15.97■□□□□ 0.15
NKX3-1-202ENST00000523261 AUTS2Q8WXX7 1259 aa15.97■□□□□ 0.15
NKX3-1-202ENST00000523261 BORCS6Q96GS4 357 aa15.97■□□□□ 0.15
NKX3-1-202ENST00000523261 ZSCAN10Q96SZ4 725 aaPredicted RBP15.97■□□□□ 0.15
NKX3-1-202ENST00000523261 GINS2Q9Y248 185 aa15.97■□□□□ 0.15
NKX3-1-202ENST00000523261 A0A0D9SFI3 127 aa15.96■□□□□ 0.15
NKX3-1-202ENST00000523261 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.96■□□□□ 0.15
NKX3-1-202ENST00000523261 HOXA2O43364 376 aa15.96■□□□□ 0.15
NKX3-1-202ENST00000523261 SRFP11831 508 aa15.96■□□□□ 0.15
NKX3-1-202ENST00000523261 HOXB3P14651 431 aaPredicted RBP15.96■□□□□ 0.15
NKX3-1-202ENST00000523261 TRAF1Q13077 416 aa15.96■□□□□ 0.15
NKX3-1-202ENST00000523261 DSC3Q14574 896 aa15.96■□□□□ 0.15
NKX3-1-202ENST00000523261 ZNF528Q3MIS6 628 aa15.96■□□□□ 0.15
NKX3-1-202ENST00000523261 NLRX1Q86UT6 975 aa15.96■□□□□ 0.15
NKX3-1-202ENST00000523261 HOMER1Q86YM7 354 aa15.96■□□□□ 0.15
NKX3-1-202ENST00000523261 SLC44A3Q8N4M1 653 aa15.96■□□□□ 0.15
NKX3-1-202ENST00000523261 FAM227BQ96M60 508 aa15.96■□□□□ 0.15
NKX3-1-202ENST00000523261 ZBP1Q9H171 429 aa15.96■□□□□ 0.15
NKX3-1-202ENST00000523261 CHMP4BQ9H444 224 aaKnown RBP15.96■□□□□ 0.15
NKX3-1-202ENST00000523261 SFXN1Q9H9B4 322 aa15.96■□□□□ 0.15
NKX3-1-202ENST00000523261 IRAK3Q9Y616 596 aa15.96■□□□□ 0.15
NKX3-1-202ENST00000523261 BAZ2BQ9UIF8 2168 aaKnown RBP15.96■□□□□ 0.14
NKX3-1-202ENST00000523261 CEP295Q9C0D2 2601 aa15.95■□□□□ 0.14
NKX3-1-202ENST00000523261 BMS1Q14692 1282 aaKnown RBP15.95■□□□□ 0.14
NKX3-1-202ENST00000523261 PLCB4Q15147 1175 aa15.95■□□□□ 0.14
NKX3-1-202ENST00000523261 NONOQ15233 471 aaKnown RBP eCLIP15.95■□□□□ 0.14
NKX3-1-202ENST00000523261 LETM2Q2VYF4 491 aa15.95■□□□□ 0.14
NKX3-1-202ENST00000523261 PPM1JQ5JR12 505 aa15.95■□□□□ 0.14
NKX3-1-202ENST00000523261 ODR4Q5SWX8 454 aa15.95■□□□□ 0.14
NKX3-1-202ENST00000523261 MTHFD1LQ6UB35 978 aa15.95■□□□□ 0.14
NKX3-1-202ENST00000523261 ZNF589Q86UQ0 364 aaPredicted RBP15.95■□□□□ 0.14
NKX3-1-202ENST00000523261 VPS52Q8N1B4 723 aa15.95■□□□□ 0.14
NKX3-1-202ENST00000523261 GPR152Q8TDT2 470 aa15.95■□□□□ 0.14
NKX3-1-202ENST00000523261 GPRASP2Q96D09 838 aa15.95■□□□□ 0.14
NKX3-1-202ENST00000523261 PIGSQ96S52 555 aa15.95■□□□□ 0.14
NKX3-1-202ENST00000523261 ARHGEF3Q9NR81 526 aa15.95■□□□□ 0.14
NKX3-1-202ENST00000523261 MAD2L2Q9UI95 211 aa15.95■□□□□ 0.14
NKX3-1-202ENST00000523261 USP18Q9UMW8 372 aa15.95■□□□□ 0.14
NKX3-1-202ENST00000523261 SMG5Q9UPR3 1016 aaKnown RBP15.95■□□□□ 0.14
NKX3-1-202ENST00000523261 NT5C1B-RDH14C9J2C7 533 aa15.94■□□□□ 0.14
NKX3-1-202ENST00000523261 GPR182O15218 404 aa15.94■□□□□ 0.14
NKX3-1-202ENST00000523261 NT5C2P49902 561 aa15.94■□□□□ 0.14
NKX3-1-202ENST00000523261 COL9A3Q14050 684 aaPredicted RBP15.94■□□□□ 0.14
NKX3-1-202ENST00000523261 MCMDC2Q4G0Z9 681 aa15.94■□□□□ 0.14
NKX3-1-202ENST00000523261 FAM228AQ86W67 206 aa15.94■□□□□ 0.14
NKX3-1-202ENST00000523261 TMEM87AQ8NBN3 555 aa15.94■□□□□ 0.14
NKX3-1-202ENST00000523261 PJA1Q8NG27 643 aa15.94■□□□□ 0.14
NKX3-1-202ENST00000523261 SECISBP2LQ93073 1101 aaKnown RBP15.94■□□□□ 0.14
NKX3-1-202ENST00000523261 FOXQ1Q9C009 403 aa15.94■□□□□ 0.14
NKX3-1-202ENST00000523261 SH2B1Q9NRF2 756 aaPredicted RBP15.94■□□□□ 0.14
NKX3-1-202ENST00000523261 FBXO4Q9UKT5 387 aa15.94■□□□□ 0.14
NKX3-1-202ENST00000523261 PCDHGA2Q9Y5H1 932 aa15.94■□□□□ 0.14
NKX3-1-202ENST00000523261 PALM3A6NDB9 673 aaPredicted RBP15.93■□□□□ 0.14
NKX3-1-202ENST00000523261 B4E1Z4 1266 aa15.93■□□□□ 0.14
NKX3-1-202ENST00000523261 LRRN2O75325 713 aa15.93■□□□□ 0.14
NKX3-1-202ENST00000523261 CTSAP10619 480 aa15.93■□□□□ 0.14
NKX3-1-202ENST00000523261 METAP2P50579 478 aaKnown RBP eCLIP15.93■□□□□ 0.14
NKX3-1-202ENST00000523261 CLLU1OSQ5K130 101 aa15.93■□□□□ 0.14
NKX3-1-202ENST00000523261 C15orf39Q6ZRI6 1047 aa15.93■□□□□ 0.14
NKX3-1-202ENST00000523261 KIAA0319LQ8IZA0 1049 aa15.93■□□□□ 0.14
NKX3-1-202ENST00000523261 ABI1Q8IZP0 508 aa15.93■□□□□ 0.14
NKX3-1-202ENST00000523261 TNPO1Q92973 898 aaKnown RBP15.93■□□□□ 0.14
NKX3-1-202ENST00000523261 TMEM169Q96HH4 297 aa15.93■□□□□ 0.14
NKX3-1-202ENST00000523261 CDHR1Q96JP9 859 aa15.93■□□□□ 0.14
NKX3-1-202ENST00000523261 EPC1Q9H2F5 836 aa15.93■□□□□ 0.14
NKX3-1-202ENST00000523261 RIOX1Q9H6W3 641 aa15.93■□□□□ 0.14
NKX3-1-202ENST00000523261 PARD6AQ9NPB6 346 aa15.93■□□□□ 0.14
NKX3-1-202ENST00000523261 PATJQ8NI35 1801 aa15.93■□□□□ 0.14
NKX3-1-202ENST00000523261 DOCK8Q8NF50 2099 aa15.93■□□□□ 0.14
NKX3-1-202ENST00000523261 CNOT1A5YKK6 2376 aaKnown RBP15.92■□□□□ 0.14
NKX3-1-202ENST00000523261 MIA3Q5JRA6 1907 aa15.92■□□□□ 0.14
NKX3-1-202ENST00000523261 BCAR1P56945 870 aa15.92■□□□□ 0.14
NKX3-1-202ENST00000523261 DMWDQ09019 674 aa15.92■□□□□ 0.14
NKX3-1-202ENST00000523261 GIT2Q14161 759 aa15.92■□□□□ 0.14
NKX3-1-202ENST00000523261 DCLRE1AQ6PJP8 1040 aa15.92■□□□□ 0.14
NKX3-1-202ENST00000523261 PPFIBP1Q86W92 1011 aa15.92■□□□□ 0.14
NKX3-1-202ENST00000523261 TMEM173Q86WV6 379 aaPredicted RBP15.92■□□□□ 0.14
NKX3-1-202ENST00000523261 ZBTB44Q8NCP5 570 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms