RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 GSTTP1A0A1W2PQM5 241 aa12.74□□□□□ -0.37
CTNNA1-234ENST00000522227 PARP1P09874 1014 aaKnown RBP12.74□□□□□ -0.37
CTNNA1-234ENST00000522227 SRFP11831 508 aa12.74□□□□□ -0.37
CTNNA1-234ENST00000522227 TGM1P22735 817 aa12.74□□□□□ -0.37
CTNNA1-234ENST00000522227 BMS1Q14692 1282 aaKnown RBP12.74□□□□□ -0.37
CTNNA1-234ENST00000522227 NONOQ15233 471 aaKnown RBP eCLIP12.74□□□□□ -0.37
CTNNA1-234ENST00000522227 PTPN14Q15678 1187 aa12.74□□□□□ -0.37
CTNNA1-234ENST00000522227 LETM2Q2VYF4 491 aa12.74□□□□□ -0.37
CTNNA1-234ENST00000522227 ASPRV1Q53RT3 343 aa12.74□□□□□ -0.37
CTNNA1-234ENST00000522227 PHLDB3Q6NSJ2 640 aa12.74□□□□□ -0.37
CTNNA1-234ENST00000522227 TSSK4Q6SA08 328 aa12.74□□□□□ -0.37
CTNNA1-234ENST00000522227 ABI1Q8IZP0 508 aa12.74□□□□□ -0.37
CTNNA1-234ENST00000522227 SLC39A11Q8N1S5 342 aa12.74□□□□□ -0.37
CTNNA1-234ENST00000522227 STAG2Q8N3U4 1231 aa12.74□□□□□ -0.37
CTNNA1-234ENST00000522227 PJA1Q8NG27 643 aa12.74□□□□□ -0.37
CTNNA1-234ENST00000522227 SLC22A17Q8WUG5 538 aa12.74□□□□□ -0.37
CTNNA1-234ENST00000522227 SEPT1Q8WYJ6 367 aa12.74□□□□□ -0.37
CTNNA1-234ENST00000522227 TMEM117Q9H0C3 514 aa12.74□□□□□ -0.37
CTNNA1-234ENST00000522227 SFXN1Q9H9B4 322 aa12.74□□□□□ -0.37
CTNNA1-234ENST00000522227 TMEM161AQ9NX61 479 aa12.74□□□□□ -0.37
CTNNA1-234ENST00000522227 GMEB2Q9UKD1 530 aa12.74□□□□□ -0.37
CTNNA1-234ENST00000522227 ST3GAL5Q9UNP4 418 aa12.74□□□□□ -0.37
CTNNA1-234ENST00000522227 RRN3P2A6NIE6 340 aa12.73□□□□□ -0.37
CTNNA1-234ENST00000522227 SLC30A4O14863 429 aa12.73□□□□□ -0.37
CTNNA1-234ENST00000522227 FGAP02671 866 aa12.73□□□□□ -0.37
CTNNA1-234ENST00000522227 PLCB4Q15147 1175 aa12.73□□□□□ -0.37
CTNNA1-234ENST00000522227 MFSD6Q6ZSS7 791 aa12.73□□□□□ -0.37
CTNNA1-234ENST00000522227 LRRC43Q8N309 656 aa12.73□□□□□ -0.37
CTNNA1-234ENST00000522227 TMEM40Q8WWA1 233 aa12.73□□□□□ -0.37
CTNNA1-234ENST00000522227 RNF19AQ9NV58 838 aa12.73□□□□□ -0.37
CTNNA1-234ENST00000522227 NEDD4P46934 1319 aa12.72□□□□□ -0.37
CTNNA1-234ENST00000522227 ATP9AO75110 1047 aa12.72□□□□□ -0.37
CTNNA1-234ENST00000522227 ZIC2O95409 532 aaPredicted RBP12.72□□□□□ -0.37
CTNNA1-234ENST00000522227 GHRHRQ02643 423 aa12.72□□□□□ -0.37
CTNNA1-234ENST00000522227 UBXN2BQ14CS0 331 aa12.72□□□□□ -0.37
CTNNA1-234ENST00000522227 TBC1D10CQ8IV04 446 aa12.72□□□□□ -0.37
CTNNA1-234ENST00000522227 MYADMQ96S97 322 aa12.72□□□□□ -0.37
CTNNA1-234ENST00000522227 BCO2Q9BYV7 579 aa12.72□□□□□ -0.37
CTNNA1-234ENST00000522227 SMARCAD1Q9H4L7 1026 aa12.72□□□□□ -0.37
CTNNA1-234ENST00000522227 MAP3K20Q9NYL2 800 aaKnown RBP12.72□□□□□ -0.37
CTNNA1-234ENST00000522227 MTF2Q9Y483 593 aaPredicted RBP12.72□□□□□ -0.37
CTNNA1-234ENST00000522227 PCDHGA2Q9Y5H1 932 aa12.72□□□□□ -0.37
CTNNA1-234ENST00000522227 PCDHA2Q9Y5H9 948 aa12.72□□□□□ -0.37
CTNNA1-234ENST00000522227 COL4A3Q01955 1670 aa12.72□□□□□ -0.37
CTNNA1-234ENST00000522227 C2orf16Q68DN1 1984 aa12.71□□□□□ -0.37
CTNNA1-234ENST00000522227 GDF9O60383 454 aa12.71□□□□□ -0.37
CTNNA1-234ENST00000522227 SSBP05455 408 aaKnown RBP eCLIP12.71□□□□□ -0.379e-7■■■■□ 20
CTNNA1-234ENST00000522227 KLRC2P26717 231 aa12.71□□□□□ -0.37
CTNNA1-234ENST00000522227 BCAR1P56945 870 aa12.71□□□□□ -0.37
CTNNA1-234ENST00000522227 ZNF528Q3MIS6 628 aa12.71□□□□□ -0.37
CTNNA1-234ENST00000522227 N4BP2L1Q5TBK1 243 aaPredicted RBP12.71□□□□□ -0.37
CTNNA1-234ENST00000522227 NETO1Q8TDF5 533 aa12.71□□□□□ -0.37
CTNNA1-234ENST00000522227 PIBF1Q8WXW3 757 aa12.71□□□□□ -0.37
CTNNA1-234ENST00000522227 TMEM169Q96HH4 297 aa12.71□□□□□ -0.37
CTNNA1-234ENST00000522227 ZBP1Q9H171 429 aa12.71□□□□□ -0.37
CTNNA1-234ENST00000522227 EPC1Q9H2F5 836 aa12.71□□□□□ -0.37
CTNNA1-234ENST00000522227 ZBTB40Q9NUA8 1239 aa12.71□□□□□ -0.37
CTNNA1-234ENST00000522227 ZSCAN32Q9NX65 697 aa12.71□□□□□ -0.37
CTNNA1-234ENST00000522227 FBXO4Q9UKT5 387 aa12.71□□□□□ -0.37
CTNNA1-234ENST00000522227 ZMIZ1Q9ULJ6 1067 aa12.71□□□□□ -0.37
CTNNA1-234ENST00000522227 KLRF2D3W0D1 207 aa12.7□□□□□ -0.38
CTNNA1-234ENST00000522227 ZBTB5O15062 677 aa12.7□□□□□ -0.38
CTNNA1-234ENST00000522227 GPR182O15218 404 aa12.7□□□□□ -0.38
CTNNA1-234ENST00000522227 STAM2O75886 525 aa12.7□□□□□ -0.38
CTNNA1-234ENST00000522227 RPLP2P05387 115 aaKnown RBP12.7□□□□□ -0.38
CTNNA1-234ENST00000522227 PROS1P07225 676 aa12.7□□□□□ -0.38
CTNNA1-234ENST00000522227 NCLP19338 710 aaKnown RBP12.7□□□□□ -0.38
CTNNA1-234ENST00000522227 CD72P21854 359 aa12.7□□□□□ -0.38
CTNNA1-234ENST00000522227 ALDH7A1P49419 539 aaKnown RBP12.7□□□□□ -0.38
CTNNA1-234ENST00000522227 SNW1Q13573 536 aaKnown RBP12.7□□□□□ -0.38
CTNNA1-234ENST00000522227 ALX1Q15699 326 aa12.7□□□□□ -0.38
CTNNA1-234ENST00000522227 KIZQ2M2Z5 673 aa12.7□□□□□ -0.38
CTNNA1-234ENST00000522227 CLLU1OSQ5K130 101 aa12.7□□□□□ -0.38
CTNNA1-234ENST00000522227 NLRX1Q86UT6 975 aa12.7□□□□□ -0.38
CTNNA1-234ENST00000522227 FAM228AQ86W67 206 aa12.7□□□□□ -0.38
CTNNA1-234ENST00000522227 TMEM173Q86WV6 379 aaPredicted RBP12.7□□□□□ -0.38
CTNNA1-234ENST00000522227 DGKHQ86XP1 1220 aa12.7□□□□□ -0.38
CTNNA1-234ENST00000522227 HELQQ8TDG4 1101 aa12.7□□□□□ -0.38
CTNNA1-234ENST00000522227 ESR2Q92731 530 aa12.7□□□□□ -0.38
CTNNA1-234ENST00000522227 PCYT2Q99447 389 aa12.7□□□□□ -0.38
CTNNA1-234ENST00000522227 OSMRQ99650 979 aa12.7□□□□□ -0.38
CTNNA1-234ENST00000522227 SENP7Q9BQF6 1050 aa12.7□□□□□ -0.38
CTNNA1-234ENST00000522227 RAB23Q9ULC3 237 aa12.7□□□□□ -0.38
CTNNA1-234ENST00000522227 ANKRD11Q6UB99 2663 aaPredicted RBP12.7□□□□□ -0.38
CTNNA1-234ENST00000522227 KDM3AQ9Y4C1 1321 aa12.69□□□□□ -0.38
CTNNA1-234ENST00000522227 SMIM35A0A1B0GVV1 85 aa12.69□□□□□ -0.38
CTNNA1-234ENST00000522227 C1QTNF9BB2RNN3 333 aa12.69□□□□□ -0.38
CTNNA1-234ENST00000522227 HOXA2O43364 376 aa12.69□□□□□ -0.38
CTNNA1-234ENST00000522227 ZC3H11AO75152 810 aaKnown RBP eCLIP12.69□□□□□ -0.38
CTNNA1-234ENST00000522227 C1QTNF9P0C862 333 aa12.69□□□□□ -0.38
CTNNA1-234ENST00000522227 CTSAP10619 480 aa12.69□□□□□ -0.38
CTNNA1-234ENST00000522227 KLRC1P26715 233 aa12.69□□□□□ -0.38
CTNNA1-234ENST00000522227 PMLP29590 882 aa12.69□□□□□ -0.38
CTNNA1-234ENST00000522227 FAM189BP81408 668 aa12.69□□□□□ -0.38
CTNNA1-234ENST00000522227 MTHFD1LQ6UB35 978 aa12.69□□□□□ -0.38
CTNNA1-234ENST00000522227 ZBTB44Q8NCP5 570 aa12.69□□□□□ -0.38
CTNNA1-234ENST00000522227 PIGSQ96S52 555 aa12.69□□□□□ -0.38
CTNNA1-234ENST00000522227 AZI2Q9H6S1 392 aa12.69□□□□□ -0.38
CTNNA1-234ENST00000522227 ELAC1Q9H777 363 aaKnown RBP12.69□□□□□ -0.38
CTNNA1-234ENST00000522227 MIA3Q5JRA6 1907 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms