RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 RPN1P04843 607 aaKnown RBP5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 TSPY4P0CV99 314 aa5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 TSPY10P0CW01 314 aa5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 NCAM1P13591 858 aa5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 LSSP48449 732 aa5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 SEPHS1P49903 392 aa5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 FXR1P51114 621 aaKnown RBP eCLIP5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 HSPA2P54652 639 aa5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 MPP1Q00013 466 aa5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 MAP4K2Q12851 820 aa5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 FAPQ12884 760 aa5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 LRRC32Q14392 662 aa5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 ACAP2Q15057 778 aa5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 CLUL1Q15846 466 aa5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 FAM133BQ5BKY9 247 aaKnown RBP5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 RETSATQ6NUM9 610 aa5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 TLDC1Q6P9B6 456 aa5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 OVCH2Q7RTZ1 564 aa5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 SRGAP1Q7Z6B7 1085 aa5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 ANKLE2Q86XL3 938 aa5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 PTRH1Q86Y79 214 aaKnown RBP5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 MFSD4AQ8N468 514 aa5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 KIAA1958Q8N8K9 716 aa5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 DEPTORQ8TB45 409 aa5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 RSPH1Q8WYR4 309 aa5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 MRGPRX3Q96LB0 322 aa5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 TEKT5Q96M29 485 aa5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 UBL7Q96S82 380 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 ISCA1Q9BUE6 129 aa5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 MYLK2Q9H1R3 596 aa5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 VPS11Q9H270 941 aa5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 BHMT2Q9H2M3 363 aa5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 NKX2-4Q9H2Z4 354 aa5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 TRIT1Q9H3H1 467 aaKnown RBP5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 RETREG1Q9H6L5 497 aa5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 RTEL1Q9NZ71 1219 aa5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 ISY1Q9ULR0 285 aaKnown RBP5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 INVSQ9Y283 1065 aa5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 CRYL1Q9Y2S2 319 aa5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 TMX2Q9Y320 296 aa5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 ZC3H13Q5T200 1668 aaKnown RBP5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 MYO3AQ8NEV4 1616 aa5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 NEURL4Q96JN8 1562 aa5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 CEP170BQ9Y4F5 1589 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 A2ML1A8K2U0 1454 aa5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 ERVK-7P63135 1459 aa5.07□□□□□ -1.6
HMGB1P21-201ENST00000502313 FAM181BA6NEQ2 426 aa5.06□□□□□ -1.6
HMGB1P21-201ENST00000502313 K7ENM7 598 aa5.06□□□□□ -1.6
HMGB1P21-201ENST00000502313 RNF225M0QZC1 329 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P21-201ENST00000502313 STXBP3O00186 592 aa5.06□□□□□ -1.6
HMGB1P21-201ENST00000502313 TRAF5O00463 557 aa5.06□□□□□ -1.6
HMGB1P21-201ENST00000502313 SHOXO15266 292 aa5.06□□□□□ -1.6
HMGB1P21-201ENST00000502313 NCAM2O15394 837 aa5.06□□□□□ -1.6
HMGB1P21-201ENST00000502313 DYNC1LI2O43237 492 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P21-201ENST00000502313 GAS7O60861 476 aa5.06□□□□□ -1.6
HMGB1P21-201ENST00000502313 ATP2A2P16615 1042 aaKnown RBP5.06□□□□□ -1.6
HMGB1P21-201ENST00000502313 ABCB4P21439 1286 aa5.06□□□□□ -1.6
HMGB1P21-201ENST00000502313 STT3AP46977 705 aa5.06□□□□□ -1.6
HMGB1P21-201ENST00000502313 INSM1Q01101 510 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P21-201ENST00000502313 GRM1Q13255 1194 aa5.06□□□□□ -1.6
HMGB1P21-201ENST00000502313 SEMA5AQ13591 1074 aa5.06□□□□□ -1.6
HMGB1P21-201ENST00000502313 ADGRE1Q14246 886 aa5.06□□□□□ -1.6
HMGB1P21-201ENST00000502313 TAF11Q15544 211 aa5.06□□□□□ -1.6
HMGB1P21-201ENST00000502313 CDC37Q16543 378 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P21-201ENST00000502313 NBPF8Q3BBV2 869 aa5.06□□□□□ -1.6
HMGB1P21-201ENST00000502313 CCDC92Q53HC0 331 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P21-201ENST00000502313 GPATCH4Q5T3I0 446 aaKnown RBP5.06□□□□□ -1.6
HMGB1P21-201ENST00000502313 INTS11Q5TA45 600 aaKnown RBP5.06□□□□□ -1.6
HMGB1P21-201ENST00000502313 VPS53Q5VIR6 699 aa5.06□□□□□ -1.6
HMGB1P21-201ENST00000502313 TTLL5Q6EMB2 1281 aa5.06□□□□□ -1.6
HMGB1P21-201ENST00000502313 GPR155Q7Z3F1 870 aa5.06□□□□□ -1.6
HMGB1P21-201ENST00000502313 DDX53Q86TM3 631 aaKnown RBP5.06□□□□□ -1.6
HMGB1P21-201ENST00000502313 CLEC10AQ8IUN9 316 aa5.06□□□□□ -1.6
HMGB1P21-201ENST00000502313 GRAMD1CQ8IYS0 662 aa5.06□□□□□ -1.6
HMGB1P21-201ENST00000502313 IGSF22Q8N9C0 903 aa5.06□□□□□ -1.6
HMGB1P21-201ENST00000502313 DTWD2Q8NBA8 298 aa5.06□□□□□ -1.6
HMGB1P21-201ENST00000502313 PIWIL2Q8TC59 973 aaKnown RBP5.06□□□□□ -1.6
HMGB1P21-201ENST00000502313 KIAA1191Q96A73 305 aa5.06□□□□□ -1.6
HMGB1P21-201ENST00000502313 BARD1Q99728 777 aaKnown RBP5.06□□□□□ -1.6
HMGB1P21-201ENST00000502313 GTPBP4Q9BZE4 634 aaKnown RBP5.06□□□□□ -1.6
HMGB1P21-201ENST00000502313 FAM204AQ9H8W3 233 aa5.06□□□□□ -1.6
HMGB1P21-201ENST00000502313 AGO4Q9HCK5 861 aaKnown RBP5.06□□□□□ -1.6
HMGB1P21-201ENST00000502313 CYP26B1Q9NR63 512 aa5.06□□□□□ -1.6
HMGB1P21-201ENST00000502313 SMYD2Q9NRG4 433 aa5.06□□□□□ -1.6
HMGB1P21-201ENST00000502313 H2AFY2Q9P0M6 372 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P21-201ENST00000502313 ZKSCAN5Q9Y2L8 839 aa5.06□□□□□ -1.6
HMGB1P21-201ENST00000502313 PCDHA8Q9Y5H6 950 aa5.06□□□□□ -1.6
HMGB1P21-201ENST00000502313 UNC13BO14795 1591 aa5.06□□□□□ -1.6
HMGB1P21-201ENST00000502313 EFCAB6Q5THR3 1501 aa5.06□□□□□ -1.6
HMGB1P21-201ENST00000502313 NLRP1Q9C000 1473 aa5.06□□□□□ -1.6
HMGB1P21-201ENST00000502313 NAIPQ13075 1403 aa5.06□□□□□ -1.6
HMGB1P21-201ENST00000502313 UHRF1BP1Q6BDS2 1440 aa5.06□□□□□ -1.6
HMGB1P21-201ENST00000502313 ANKRD50Q9ULJ7 1429 aa5.06□□□□□ -1.6
HMGB1P21-201ENST00000502313 ANKRD30AQ9BXX3 1397 aa5.05□□□□□ -1.6
HMGB1P21-201ENST00000502313 RRN3P2A6NIE6 340 aa5.05□□□□□ -1.6
HMGB1P21-201ENST00000502313 RASA4BC9J798 803 aa5.05□□□□□ -1.6
HMGB1P21-201ENST00000502313 H0Y8X5 98 aa5.05□□□□□ -1.6
HMGB1P21-201ENST00000502313 MEFVO15553 781 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P21-201ENST00000502313 RASA4O43374 803 aa5.05□□□□□ -1.6
HMGB1P21-201ENST00000502313 HRGP04196 525 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms