RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 KCNMB3Q9NPA1 279 aa15.78■□□□□ 0.12
VTI1A-206ENST00000489142 NRBP2Q9NSY0 501 aa15.78■□□□□ 0.12
VTI1A-206ENST00000489142 VAV3Q9UKW4 847 aa15.78■□□□□ 0.12
VTI1A-206ENST00000489142 ST3GAL5Q9UNP4 418 aa15.78■□□□□ 0.12
VTI1A-206ENST00000489142 SQORQ9Y6N5 450 aa15.78■□□□□ 0.12
VTI1A-206ENST00000489142 ARID2Q68CP9 1835 aa15.78■□□□□ 0.12
VTI1A-206ENST00000489142 BTBD18B2RXH4 712 aa15.77■□□□□ 0.12
VTI1A-206ENST00000489142 WNT7AO00755 349 aa15.77■□□□□ 0.12
VTI1A-206ENST00000489142 EIF5BO60841 1220 aaKnown RBP15.77■□□□□ 0.12
VTI1A-206ENST00000489142 DGKIO75912 1065 aa15.77■□□□□ 0.12
VTI1A-206ENST00000489142 STBD1O95210 358 aa15.77■□□□□ 0.12
VTI1A-206ENST00000489142 KCNQ1P51787 676 aa15.77■□□□□ 0.12
VTI1A-206ENST00000489142 CRYBB1P53674 252 aaPredicted RBP15.77■□□□□ 0.12
VTI1A-206ENST00000489142 NLRP11P59045 1033 aaKnown RBP15.77■□□□□ 0.12
VTI1A-206ENST00000489142 MRPS5P82675 430 aaKnown RBP15.77■□□□□ 0.12
VTI1A-206ENST00000489142 GUCY1B3Q02153 619 aa15.77■□□□□ 0.12
VTI1A-206ENST00000489142 DRP2Q13474 957 aa15.77■□□□□ 0.12
VTI1A-206ENST00000489142 BTG3Q14201 252 aaPredicted RBP15.77■□□□□ 0.12
VTI1A-206ENST00000489142 PLA2G4FQ68DD2 849 aa15.77■□□□□ 0.12
VTI1A-206ENST00000489142 FAM228AQ86W67 206 aa15.77■□□□□ 0.12
VTI1A-206ENST00000489142 LINC01465Q8N7H1 131 aa15.77■□□□□ 0.12
VTI1A-206ENST00000489142 RDM1Q8NG50 284 aa15.77■□□□□ 0.12
VTI1A-206ENST00000489142 ATXN2LQ8WWM7 1075 aaKnown RBP15.77■□□□□ 0.12
VTI1A-206ENST00000489142 HAS1Q92839 578 aa15.77■□□□□ 0.12
VTI1A-206ENST00000489142 ASB2Q96Q27 587 aa15.77■□□□□ 0.12
VTI1A-206ENST00000489142 MAP7D2Q96T17 732 aa15.77■□□□□ 0.12
VTI1A-206ENST00000489142 KIF2CQ99661 725 aa15.77■□□□□ 0.12
VTI1A-206ENST00000489142 ADAM2Q99965 735 aa15.77■□□□□ 0.12
VTI1A-206ENST00000489142 FTHL17Q9BXU8 183 aa15.77■□□□□ 0.12
VTI1A-206ENST00000489142 FNDC1Q4ZHG4 1894 aaPredicted RBP15.77■□□□□ 0.11
VTI1A-206ENST00000489142 DDX11L8A8MPP1 907 aa15.76■□□□□ 0.11
VTI1A-206ENST00000489142 MAGEB2O15479 319 aa15.76■□□□□ 0.11
VTI1A-206ENST00000489142 MARCH6O60337 910 aa15.76■□□□□ 0.11
VTI1A-206ENST00000489142 MMP1P03956 469 aa15.76■□□□□ 0.11
VTI1A-206ENST00000489142 LINC00271P0C7V0 271 aa15.76■□□□□ 0.11
VTI1A-206ENST00000489142 FGFR4P22455 802 aa15.76■□□□□ 0.11
VTI1A-206ENST00000489142 TBC1D8BQ0IIM8 1120 aa15.76■□□□□ 0.11
VTI1A-206ENST00000489142 GPM6BQ13491 265 aa15.76■□□□□ 0.11
VTI1A-206ENST00000489142 PPP4R3AQ6IN85 833 aa15.76■□□□□ 0.11
VTI1A-206ENST00000489142 NPAS4Q8IUM7 802 aa15.76■□□□□ 0.11
VTI1A-206ENST00000489142 ZNF689Q96CS4 500 aaPredicted RBP15.76■□□□□ 0.11
VTI1A-206ENST00000489142 BRMS1Q9HCU9 246 aa15.76■□□□□ 0.11
VTI1A-206ENST00000489142 WRAP73Q9P2S5 460 aaPredicted RBP15.76■□□□□ 0.11
VTI1A-206ENST00000489142 LRFN2Q9ULH4 789 aa15.76■□□□□ 0.11
VTI1A-206ENST00000489142 LIMCH1Q9UPQ0 1083 aa15.76■□□□□ 0.11
VTI1A-206ENST00000489142 MRPL42Q9Y6G3 142 aaKnown RBP15.76■□□□□ 0.11
VTI1A-206ENST00000489142 DENND3A2RUS2 1198 aa15.75■□□□□ 0.11
VTI1A-206ENST00000489142 H3BNC9 293 aa15.75■□□□□ 0.11
VTI1A-206ENST00000489142 CSDE1O75534 798 aaKnown RBP15.75■□□□□ 0.11
VTI1A-206ENST00000489142 GCFC2P16383 781 aaKnown RBP15.75■□□□□ 0.11
VTI1A-206ENST00000489142 PPP2R5CQ13362 524 aa15.75■□□□□ 0.11
VTI1A-206ENST00000489142 TRIM29Q14134 588 aa15.75■□□□□ 0.11
VTI1A-206ENST00000489142 TARBP2Q15633 366 aaKnown RBP15.75■□□□□ 0.11
VTI1A-206ENST00000489142 NCAPH2Q6IBW4 605 aa15.75■□□□□ 0.11
VTI1A-206ENST00000489142 DIS3L2Q8IYB7 885 aaKnown RBP15.75■□□□□ 0.11
VTI1A-206ENST00000489142 CRIPAKQ8N1N5 446 aa15.75■□□□□ 0.11
VTI1A-206ENST00000489142 FAM20AQ96MK3 541 aa15.75■□□□□ 0.11
VTI1A-206ENST00000489142 SCLT1Q96NL6 688 aa15.75■□□□□ 0.11
VTI1A-206ENST00000489142 SAMD11Q96NU1 681 aa15.75■□□□□ 0.11
VTI1A-206ENST00000489142 NECAB3Q96P71 396 aaPredicted RBP15.75■□□□□ 0.11
VTI1A-206ENST00000489142 CEP89Q96ST8 783 aa15.75■□□□□ 0.11
VTI1A-206ENST00000489142 ADAMTS10Q9H324 1103 aa15.75■□□□□ 0.11
VTI1A-206ENST00000489142 BRWD1Q9NSI6 2320 aa15.74■□□□□ 0.11
VTI1A-206ENST00000489142 PLXNA4Q9HCM2 1894 aa15.74■□□□□ 0.11
VTI1A-206ENST00000489142 MYO7AQ13402 2215 aa15.74■□□□□ 0.11
VTI1A-206ENST00000489142 GPR182O15218 404 aa15.74■□□□□ 0.11
VTI1A-206ENST00000489142 TMOD1P28289 359 aa15.74■□□□□ 0.11
VTI1A-206ENST00000489142 SARSP49591 514 aaKnown RBP15.74■□□□□ 0.11
VTI1A-206ENST00000489142 GPC3P51654 580 aa15.74■□□□□ 0.11
VTI1A-206ENST00000489142 NPEPPSP55786 919 aa15.74■□□□□ 0.11
VTI1A-206ENST00000489142 PSMC5P62195 406 aa15.74■□□□□ 0.11
VTI1A-206ENST00000489142 XKR3Q5GH77 459 aa15.74■□□□□ 0.11
VTI1A-206ENST00000489142 ANO5Q75V66 913 aa15.74■□□□□ 0.11
VTI1A-206ENST00000489142 ZNF579Q8NAF0 562 aaKnown RBP15.74■□□□□ 0.11
VTI1A-206ENST00000489142 IL27Q8NEV9 243 aa15.74■□□□□ 0.11
VTI1A-206ENST00000489142 ADAMTS19Q8TE59 1207 aa15.74■□□□□ 0.11
VTI1A-206ENST00000489142 NLRP7Q8WX94 980 aa15.74■□□□□ 0.11
VTI1A-206ENST00000489142 MRPL38Q96DV4 380 aaKnown RBP15.74■□□□□ 0.11
VTI1A-206ENST00000489142 NIFKQ9BYG3 293 aaKnown RBP15.74■□□□□ 0.11
VTI1A-206ENST00000489142 BMP2KQ9NSY1 1161 aaPredicted RBP15.74■□□□□ 0.11
VTI1A-206ENST00000489142 RGL1Q9NZL6 768 aa15.74■□□□□ 0.11
VTI1A-206ENST00000489142 LMCD1Q9NZU5 365 aa15.74■□□□□ 0.11
VTI1A-206ENST00000489142 HCSTQ9UBK5 93 aa15.74■□□□□ 0.11
VTI1A-206ENST00000489142 PCDHB7Q9Y5E2 793 aa15.74■□□□□ 0.11
VTI1A-206ENST00000489142 GRM6O15303 877 aa15.73■□□□□ 0.11
VTI1A-206ENST00000489142 STAG3L1P0CL83 205 aa15.73■□□□□ 0.11
VTI1A-206ENST00000489142 ATP2B1P20020 1258 aa15.73■□□□□ 0.11
VTI1A-206ENST00000489142 BMPR1AP36894 532 aa15.73■□□□□ 0.11
VTI1A-206ENST00000489142 QARSP47897 775 aaKnown RBP15.73■□□□□ 0.11
VTI1A-206ENST00000489142 CYP4A11Q02928 519 aa15.73■□□□□ 0.11
VTI1A-206ENST00000489142 CTTNQ14247 550 aaKnown RBP15.73■□□□□ 0.11
VTI1A-206ENST00000489142 FAM102BQ5T8I3 360 aa15.73■□□□□ 0.11
VTI1A-206ENST00000489142 KSR1Q8IVT5 923 aa15.73■□□□□ 0.11
VTI1A-206ENST00000489142 SYMPKQ92797 1274 aaKnown RBP15.73■□□□□ 0.11
VTI1A-206ENST00000489142 HLA-CQ95604 372 aa15.73■□□□□ 0.11
VTI1A-206ENST00000489142 DYDC2Q96IM9 177 aa15.73■□□□□ 0.11
VTI1A-206ENST00000489142 NAP1L4Q99733 375 aaKnown RBP15.73■□□□□ 0.11
VTI1A-206ENST00000489142 RGS18Q9NS28 235 aa15.73■□□□□ 0.11
VTI1A-206ENST00000489142 TBKBP1A7MCY6 615 aa15.72■□□□□ 0.11
VTI1A-206ENST00000489142 C9IYK1 514 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 158.2 ms