RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 MOXD1Q6UVY6 613 aa13.45□□□□□ -0.26
CCHCR1-215ENST00000488920 BANK1Q8NDB2 785 aa13.45□□□□□ -0.26
CCHCR1-215ENST00000488920 ZNF668Q96K58 619 aaPredicted RBP13.45□□□□□ -0.26
CCHCR1-215ENST00000488920 C11orf84Q9BUA3 381 aaPredicted RBP13.45□□□□□ -0.26
CCHCR1-215ENST00000488920 UBE2ZQ9H832 354 aaPredicted RBP13.45□□□□□ -0.26
CCHCR1-215ENST00000488920 PCDHB7Q9Y5E2 793 aa13.45□□□□□ -0.26
CCHCR1-215ENST00000488920 MRPL42Q9Y6G3 142 aaKnown RBP13.45□□□□□ -0.26
CCHCR1-215ENST00000488920 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.44□□□□□ -0.26
CCHCR1-215ENST00000488920 TMEM150BA6NC51 233 aa13.44□□□□□ -0.26
CCHCR1-215ENST00000488920 DDX11L8A8MPP1 907 aa13.44□□□□□ -0.26
CCHCR1-215ENST00000488920 C5orf67F2Z3F1 127 aa13.44□□□□□ -0.26
CCHCR1-215ENST00000488920 CSPG5O95196 566 aa13.44□□□□□ -0.26
CCHCR1-215ENST00000488920 STBD1O95210 358 aa13.44□□□□□ -0.26
CCHCR1-215ENST00000488920 LARGE1O95461 756 aa13.44□□□□□ -0.26
CCHCR1-215ENST00000488920 FDPSP14324 419 aaKnown RBP13.44□□□□□ -0.26
CCHCR1-215ENST00000488920 KCNA5P22460 613 aa13.44□□□□□ -0.26
CCHCR1-215ENST00000488920 SARSP49591 514 aaKnown RBP13.44□□□□□ -0.26
CCHCR1-215ENST00000488920 NEK4P51957 841 aa13.44□□□□□ -0.26
CCHCR1-215ENST00000488920 TCEAL5Q5H9L2 206 aa13.44□□□□□ -0.26
CCHCR1-215ENST00000488920 ODR4Q5SWX8 454 aa13.44□□□□□ -0.26
CCHCR1-215ENST00000488920 B3GNT9Q6UX72 402 aa13.44□□□□□ -0.26
CCHCR1-215ENST00000488920 PIK3AP1Q6ZUJ8 805 aa13.44□□□□□ -0.26
CCHCR1-215ENST00000488920 FAM228AQ86W67 206 aa13.44□□□□□ -0.26
CCHCR1-215ENST00000488920 CMTR2Q8IYT2 770 aaKnown RBP13.44□□□□□ -0.26
CCHCR1-215ENST00000488920 LINC01465Q8N7H1 131 aa13.44□□□□□ -0.26
CCHCR1-215ENST00000488920 RDM1Q8NG50 284 aa13.44□□□□□ -0.26
CCHCR1-215ENST00000488920 MAP7D2Q96T17 732 aa13.44□□□□□ -0.26
CCHCR1-215ENST00000488920 SH2D3AQ9BRG2 576 aa13.44□□□□□ -0.26
CCHCR1-215ENST00000488920 ADAMTS10Q9H324 1103 aa13.44□□□□□ -0.26
CCHCR1-215ENST00000488920 ALG13Q9NP73 1137 aaKnown RBP13.44□□□□□ -0.26
CCHCR1-215ENST00000488920 RGS18Q9NS28 235 aa13.44□□□□□ -0.26
CCHCR1-215ENST00000488920 SEPT9Q9UHD8 586 aaPredicted RBP13.44□□□□□ -0.26
CCHCR1-215ENST00000488920 RWDD3Q9Y3V2 267 aa13.44□□□□□ -0.26
CCHCR1-215ENST00000488920 COL4A4P53420 1690 aaPredicted RBP13.44□□□□□ -0.26
CCHCR1-215ENST00000488920 C9IYK1 514 aa13.43□□□□□ -0.26
CCHCR1-215ENST00000488920 EML1O00423 815 aa13.43□□□□□ -0.26
CCHCR1-215ENST00000488920 CCNT1O60563 726 aaKnown RBP13.43□□□□□ -0.26
CCHCR1-215ENST00000488920 TBC1D8BQ0IIM8 1120 aa13.43□□□□□ -0.26
CCHCR1-215ENST00000488920 TARBP2Q15633 366 aaKnown RBP13.43□□□□□ -0.26
CCHCR1-215ENST00000488920 MTERF2Q49AM1 385 aa13.43□□□□□ -0.26
CCHCR1-215ENST00000488920 TIGD5Q53EQ6 642 aa13.43□□□□□ -0.26
CCHCR1-215ENST00000488920 XKR3Q5GH77 459 aa13.43□□□□□ -0.26
CCHCR1-215ENST00000488920 EARS2Q5JPH6 523 aaKnown RBP13.43□□□□□ -0.26
CCHCR1-215ENST00000488920 FAM102BQ5T8I3 360 aa13.43□□□□□ -0.26
CCHCR1-215ENST00000488920 EP400NLQ6ZTU2 488 aa13.43□□□□□ -0.26
CCHCR1-215ENST00000488920 SLC24A5Q71RS6 500 aa13.43□□□□□ -0.26
CCHCR1-215ENST00000488920 NEK8Q86SG6 692 aa13.43□□□□□ -0.26
CCHCR1-215ENST00000488920 WASF1Q92558 559 aa13.43□□□□□ -0.26
CCHCR1-215ENST00000488920 NIFKQ9BYG3 293 aaKnown RBP13.43□□□□□ -0.26
CCHCR1-215ENST00000488920 NSUN3Q9H649 340 aaKnown RBP13.43□□□□□ -0.26
CCHCR1-215ENST00000488920 C1orf112Q9NSG2 853 aa13.43□□□□□ -0.26
CCHCR1-215ENST00000488920 PLAGL2Q9UPG8 496 aa13.43□□□□□ -0.26
CCHCR1-215ENST00000488920 MUC3AQ02505 3323 aa13.43□□□□□ -0.26
CCHCR1-215ENST00000488920 SIP14410 1827 aa13.43□□□□□ -0.26
CCHCR1-215ENST00000488920 FAM205CA6NFA0 338 aa13.42□□□□□ -0.26
CCHCR1-215ENST00000488920 MARCH6O60337 910 aa13.42□□□□□ -0.26
CCHCR1-215ENST00000488920 CENPBP07199 599 aaPredicted RBP13.42□□□□□ -0.26
CCHCR1-215ENST00000488920 EIF4BP23588 611 aaKnown RBP13.42□□□□□ -0.26
CCHCR1-215ENST00000488920 FOSBP53539 338 aa13.42□□□□□ -0.26
CCHCR1-215ENST00000488920 FAM189BP81408 668 aa13.42□□□□□ -0.26
CCHCR1-215ENST00000488920 NR5A1Q13285 461 aa13.42□□□□□ -0.26
CCHCR1-215ENST00000488920 DRP2Q13474 957 aa13.42□□□□□ -0.26
CCHCR1-215ENST00000488920 DSC3Q14574 896 aa13.42□□□□□ -0.26
CCHCR1-215ENST00000488920 PPP4R3AQ6IN85 833 aa13.42□□□□□ -0.26
CCHCR1-215ENST00000488920 FAM43BQ6ZT52 329 aaPredicted RBP13.42□□□□□ -0.26
CCHCR1-215ENST00000488920 GTF3C6Q969F1 213 aa13.42□□□□□ -0.26
CCHCR1-215ENST00000488920 FAM20AQ96MK3 541 aa13.42□□□□□ -0.26
CCHCR1-215ENST00000488920 SCLT1Q96NL6 688 aa13.42□□□□□ -0.26
CCHCR1-215ENST00000488920 PLVAPQ9BX97 442 aa13.42□□□□□ -0.26
CCHCR1-215ENST00000488920 KCNMB3Q9NPA1 279 aa13.42□□□□□ -0.26
CCHCR1-215ENST00000488920 VAV3Q9UKW4 847 aa13.42□□□□□ -0.26
CCHCR1-215ENST00000488920 COL4A6Q14031 1691 aa13.42□□□□□ -0.26
CCHCR1-215ENST00000488920 TTC3P53804 2025 aa13.41□□□□□ -0.26
CCHCR1-215ENST00000488920 TBKBP1A7MCY6 615 aa13.41□□□□□ -0.26
CCHCR1-215ENST00000488920 H3BQ06 376 aaPredicted RBP13.41□□□□□ -0.26
CCHCR1-215ENST00000488920 JAK2O60674 1132 aa13.41□□□□□ -0.26
CCHCR1-215ENST00000488920 EIF5BO60841 1220 aaKnown RBP13.41□□□□□ -0.26
CCHCR1-215ENST00000488920 CSDE1O75534 798 aaKnown RBP13.41□□□□□ -0.26
CCHCR1-215ENST00000488920 ITGB1P05556 798 aa13.41□□□□□ -0.26
CCHCR1-215ENST00000488920 FGFR1P11362 822 aa13.41□□□□□ -0.26
CCHCR1-215ENST00000488920 GCFC2P16383 781 aaKnown RBP13.41□□□□□ -0.26
CCHCR1-215ENST00000488920 FGFR4P22455 802 aa13.41□□□□□ -0.26
CCHCR1-215ENST00000488920 DNAJB1P25685 340 aa13.41□□□□□ -0.26
CCHCR1-215ENST00000488920 KRT2P35908 639 aa13.41□□□□□ -0.26
CCHCR1-215ENST00000488920 GPC3P51654 580 aa13.41□□□□□ -0.26
CCHCR1-215ENST00000488920 PSMC5P62195 406 aa13.41□□□□□ -0.26
CCHCR1-215ENST00000488920 PPP2R5CQ13362 524 aa13.41□□□□□ -0.26
CCHCR1-215ENST00000488920 LEXMQ3ZCV2 418 aa13.41□□□□□ -0.26
CCHCR1-215ENST00000488920 SPOUT1Q5T280 376 aaKnown RBP13.41□□□□□ -0.26
CCHCR1-215ENST00000488920 ANO5Q75V66 913 aa13.41□□□□□ -0.26
CCHCR1-215ENST00000488920 ZNF710Q8N1W2 664 aa13.41□□□□□ -0.26
CCHCR1-215ENST00000488920 KLHL23Q8NBE8 558 aa13.41□□□□□ -0.26
CCHCR1-215ENST00000488920 NSUN7Q8NE18 718 aaKnown RBP13.41□□□□□ -0.26
CCHCR1-215ENST00000488920 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.41□□□□□ -0.26
CCHCR1-215ENST00000488920 NLRP7Q8WX94 980 aa13.41□□□□□ -0.26
CCHCR1-215ENST00000488920 HAS1Q92839 578 aa13.41□□□□□ -0.26
CCHCR1-215ENST00000488920 CEP89Q96ST8 783 aa13.41□□□□□ -0.26
CCHCR1-215ENST00000488920 LMAN2LQ9H0V9 348 aa13.41□□□□□ -0.26
CCHCR1-215ENST00000488920 ATP6V0A4Q9HBG4 840 aa13.41□□□□□ -0.26
CCHCR1-215ENST00000488920 RNF216Q9NWF9 866 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms