RNA–Protein interactions for RNA: ENST00000486360.1

PPFIA4-205, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 4,547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-205ENST00000486360 IL17RAQ96F46 866 aa16.78■□□□□ 0.28
PPFIA4-205ENST00000486360 JPH1Q9HDC5 661 aaPredicted RBP16.78■□□□□ 0.28
PPFIA4-205ENST00000486360 NUB1Q9Y5A7 615 aa16.78■□□□□ 0.28
PPFIA4-205ENST00000486360 KIF13AQ9H1H9 1805 aa16.78■□□□□ 0.28
PPFIA4-205ENST00000486360 ANO9A1A5B4 782 aa16.78■□□□□ 0.28
PPFIA4-205ENST00000486360 HSPA6P17066 643 aa16.78■□□□□ 0.28
PPFIA4-205ENST00000486360 YWHABP31946 246 aaKnown RBP16.78■□□□□ 0.28
PPFIA4-205ENST00000486360 GBP1P32455 592 aa16.78■□□□□ 0.28
PPFIA4-205ENST00000486360 PKNOX2Q96KN3 472 aa16.78■□□□□ 0.28
PPFIA4-205ENST00000486360 NBPF3Q9H094 633 aa16.78■□□□□ 0.28
PPFIA4-205ENST00000486360 FBXO28Q9NVF7 368 aa16.78■□□□□ 0.28
PPFIA4-205ENST00000486360 ODF2LQ9ULJ1 636 aa16.78■□□□□ 0.28
PPFIA4-205ENST00000486360 SLC37A4O43826 429 aa16.78■□□□□ 0.28
PPFIA4-205ENST00000486360 CTNND1O60716 968 aaKnown RBP16.78■□□□□ 0.28
PPFIA4-205ENST00000486360 NR3C2P08235 984 aa16.78■□□□□ 0.28
PPFIA4-205ENST00000486360 KCNJ6P48051 423 aa16.78■□□□□ 0.28
PPFIA4-205ENST00000486360 EPHB4P54760 987 aa16.78■□□□□ 0.28
PPFIA4-205ENST00000486360 LLGL1Q15334 1064 aa16.78■□□□□ 0.28
PPFIA4-205ENST00000486360 C6orf163Q5TEZ5 329 aa16.78■□□□□ 0.28
PPFIA4-205ENST00000486360 DNAJC24Q6P3W2 148 aa16.78■□□□□ 0.28
PPFIA4-205ENST00000486360 FBF1Q8TES7 1133 aa16.78■□□□□ 0.28
PPFIA4-205ENST00000486360 FUCA2Q9BTY2 467 aa16.78■□□□□ 0.28
PPFIA4-205ENST00000486360 BEGAINQ9BUH8 593 aa16.78■□□□□ 0.28
PPFIA4-205ENST00000486360 ATF2P15336 505 aa16.77■□□□□ 0.28
PPFIA4-205ENST00000486360 RUNDC3BQ96NL0 473 aa16.77■□□□□ 0.28
PPFIA4-205ENST00000486360 ECE1P42892 770 aa16.77■□□□□ 0.28
PPFIA4-205ENST00000486360 FXR1P51114 621 aaKnown RBP eCLIP16.77■□□□□ 0.28
PPFIA4-205ENST00000486360 CLCN6P51797 869 aa16.77■□□□□ 0.28
PPFIA4-205ENST00000486360 E4F1Q66K89 784 aaPredicted RBP16.77■□□□□ 0.28
PPFIA4-205ENST00000486360 SH2D3AQ9BRG2 576 aa16.77■□□□□ 0.28
PPFIA4-205ENST00000486360 FAM49AQ9H0Q0 323 aaPredicted RBP16.77■□□□□ 0.28
PPFIA4-205ENST00000486360 RIOX1Q9H6W3 641 aa16.77■□□□□ 0.28
PPFIA4-205ENST00000486360 LTN1O94822 1766 aa16.77■□□□□ 0.27
PPFIA4-205ENST00000486360 CAP2P40123 477 aa16.77■□□□□ 0.27
PPFIA4-205ENST00000486360 TTLL4Q14679 1199 aa16.77■□□□□ 0.27
PPFIA4-205ENST00000486360 SETDB1Q15047 1291 aa16.77■□□□□ 0.27
PPFIA4-205ENST00000486360 CCDC125Q86Z20 511 aa16.77■□□□□ 0.27
PPFIA4-205ENST00000486360 AGBL1Q96MI9 1066 aa16.77■□□□□ 0.27
PPFIA4-205ENST00000486360 PSMD1Q99460 953 aa16.77■□□□□ 0.27
PPFIA4-205ENST00000486360 POLR3FQ9H1D9 316 aaPredicted RBP16.77■□□□□ 0.27
PPFIA4-205ENST00000486360 FAM114A2Q9NRY5 505 aa16.77■□□□□ 0.27
PPFIA4-205ENST00000486360 ITIH6Q6UXX5 1313 aa16.77■□□□□ 0.27
PPFIA4-205ENST00000486360 PPP1R3GB7ZBB8 358 aa16.77■□□□□ 0.27
PPFIA4-205ENST00000486360 GOLGA8KD6RF30 607 aa16.77■□□□□ 0.27
PPFIA4-205ENST00000486360 PALMO75781 387 aa16.77■□□□□ 0.27
PPFIA4-205ENST00000486360 COPB2P35606 906 aa16.77■□□□□ 0.27
PPFIA4-205ENST00000486360 DRAP1Q14919 205 aaPredicted RBP16.77■□□□□ 0.27
PPFIA4-205ENST00000486360 CASC4Q6P4E1 433 aa16.77■□□□□ 0.27
PPFIA4-205ENST00000486360 FAM71BQ8TC56 605 aa16.77■□□□□ 0.27
PPFIA4-205ENST00000486360 PABPN1LA6NDY0 278 aaKnown RBP16.76■□□□□ 0.27
PPFIA4-205ENST00000486360 MAN1A1P33908 653 aa16.76■□□□□ 0.27
PPFIA4-205ENST00000486360 APBA1Q02410 837 aa16.76■□□□□ 0.27
PPFIA4-205ENST00000486360 SCARA5Q6ZMJ2 495 aa16.76■□□□□ 0.27
PPFIA4-205ENST00000486360 MICALL1Q8N3F8 863 aa16.76■□□□□ 0.27
PPFIA4-205ENST00000486360 SAAL1Q96ER3 474 aa16.76■□□□□ 0.27
PPFIA4-205ENST00000486360 RIT2Q99578 217 aa16.76■□□□□ 0.27
PPFIA4-205ENST00000486360 ELP3Q9H9T3 547 aa16.76■□□□□ 0.27
PPFIA4-205ENST00000486360 SSX2IPQ9Y2D8 614 aa16.76■□□□□ 0.27
PPFIA4-205ENST00000486360 MED7O43513 233 aa16.76■□□□□ 0.27
PPFIA4-205ENST00000486360 IRX5P78411 483 aaPredicted RBP16.76■□□□□ 0.27
PPFIA4-205ENST00000486360 MXRA7P84157 204 aa16.76■□□□□ 0.27
PPFIA4-205ENST00000486360 PDXDC1Q6P996 788 aa16.76■□□□□ 0.27
PPFIA4-205ENST00000486360 FBXO38Q6PIJ6 1188 aa16.76■□□□□ 0.27
PPFIA4-205ENST00000486360 FASTKD5Q7L8L6 764 aaKnown RBP16.76■□□□□ 0.27
PPFIA4-205ENST00000486360 MAP7D3Q8IWC1 876 aa16.76■□□□□ 0.27
PPFIA4-205ENST00000486360 CCDC117Q8IWD4 279 aaPredicted RBP16.76■□□□□ 0.27
PPFIA4-205ENST00000486360 MXRA8Q9BRK3 442 aa16.76■□□□□ 0.27
PPFIA4-205ENST00000486360 PLSCR1O15162 318 aa16.76■□□□□ 0.27
PPFIA4-205ENST00000486360 RNF10Q8N5U6 811 aaKnown RBP16.76■□□□□ 0.27
PPFIA4-205ENST00000486360 BBOF1Q8ND07 529 aa16.76■□□□□ 0.27
PPFIA4-205ENST00000486360 NACA2Q9H009 215 aa16.76■□□□□ 0.27
PPFIA4-205ENST00000486360 INTS2Q9H0H0 1204 aaKnown RBP16.76■□□□□ 0.27
PPFIA4-205ENST00000486360 PTPN22Q9Y2R2 807 aa16.76■□□□□ 0.27
PPFIA4-205ENST00000486360 DLG5Q8TDM6 1919 aa16.76■□□□□ 0.27
PPFIA4-205ENST00000486360 KRT39Q6A163 491 aa16.75■□□□□ 0.27
PPFIA4-205ENST00000486360 PHLDB2Q86SQ0 1253 aa16.75■□□□□ 0.27
PPFIA4-205ENST00000486360 TRIM50Q86XT4 487 aa16.75■□□□□ 0.27
PPFIA4-205ENST00000486360 UHMK1Q8TAS1 419 aaKnown RBP16.75■□□□□ 0.27
PPFIA4-205ENST00000486360 MMP19Q99542 508 aa16.75■□□□□ 0.27
PPFIA4-205ENST00000486360 CHP1Q99653 195 aa16.75■□□□□ 0.27
PPFIA4-205ENST00000486360 TRIM7Q9C029 511 aa16.75■□□□□ 0.27
PPFIA4-205ENST00000486360 XRN1Q8IZH2 1706 aaKnown RBP16.75■□□□□ 0.27
PPFIA4-205ENST00000486360 ALDH3A1P30838 453 aa16.75■□□□□ 0.27
PPFIA4-205ENST00000486360 SHMT1P34896 483 aa16.75■□□□□ 0.27
PPFIA4-205ENST00000486360 EDRF1Q3B7T1 1238 aa16.75■□□□□ 0.27
PPFIA4-205ENST00000486360 SGO2Q562F6 1265 aa16.75■□□□□ 0.27
PPFIA4-205ENST00000486360 LGSNQ5TDP6 509 aa16.75■□□□□ 0.27
PPFIA4-205ENST00000486360 HAUS1Q96CS2 278 aa16.75■□□□□ 0.27
PPFIA4-205ENST00000486360 PITPNM2Q9BZ72 1349 aa16.75■□□□□ 0.27
PPFIA4-205ENST00000486360 RGPD8O14715 1765 aaPredicted RBP16.75■□□□□ 0.27
PPFIA4-205ENST00000486360 ITIH3Q06033 890 aa16.75■□□□□ 0.27
PPFIA4-205ENST00000486360 MYO1EQ12965 1108 aa16.75■□□□□ 0.27
PPFIA4-205ENST00000486360 CATSPER4Q7RTX7 472 aa16.75■□□□□ 0.27
PPFIA4-205ENST00000486360 TC2NQ8N9U0 490 aa16.75■□□□□ 0.27
PPFIA4-205ENST00000486360 GMCL1Q96IK5 515 aa16.75■□□□□ 0.27
PPFIA4-205ENST00000486360 HACL1Q9UJ83 578 aa16.75■□□□□ 0.27
PPFIA4-205ENST00000486360 IQCA1LA6NCM1 817 aa16.75■□□□□ 0.27
PPFIA4-205ENST00000486360 LMNB2Q03252 620 aa16.75■□□□□ 0.27
PPFIA4-205ENST00000486360 ZNF667Q5HYK9 610 aa16.75■□□□□ 0.27
PPFIA4-205ENST00000486360 FAM149B1Q96BN6 582 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms