RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 GRK3P35626 688 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 SSTP61278 116 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 IFRD2Q12894 506 aaPredicted RBP5.78□□□□□ -1.48
USF3-202ENST00000478658 INPP5AQ14642 412 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 TBC1D9BQ66K14 1250 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 GALNT17Q6IS24 598 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 CCDC60Q8IWA6 550 aaPredicted RBP5.78□□□□□ -1.48
USF3-202ENST00000478658 CYP4Z2PQ8N1L4 340 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 NBPF15Q8N660 670 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 TRIML2Q8N7C3 387 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 METTL14Q9HCE5 456 aaKnown RBP5.78□□□□□ -1.48
USF3-202ENST00000478658 PCDHGA4Q9Y5G9 962 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 TTC41PQ6P2S7 1318 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 ATP1A1P05023 1023 aaKnown RBP5.78□□□□□ -1.48
USF3-202ENST00000478658 KLC1Q07866 573 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 SLC44A4Q53GD3 710 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 DDI2Q5TDH0 399 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 LRRC31Q6UY01 552 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 GADL1Q6ZQY3 521 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 CNBD1Q8NA66 436 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 CAPSLQ8WWF8 208 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 SUCLG2Q96I99 432 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 SETD4Q9NVD3 440 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 WDR35Q9P2L0 1181 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 ANAPC2Q9UJX6 822 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 DNM3Q9UQ16 869 aa5.78□□□□□ -1.48
USF3-202ENST00000478658 KIF28PB7ZC32 967 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 PDE9AO76083 593 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 TDP2O95551 362 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 RPLP2P05387 115 aaKnown RBP5.77□□□□□ -1.49
USF3-202ENST00000478658 LYNP07948 512 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 CPA3P15088 417 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 ATF2P15336 505 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 NBPF9Q3BBW0 867 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 PDCD4Q53EL6 469 aaKnown RBP5.77□□□□□ -1.49
USF3-202ENST00000478658 HSP90AA4PQ58FG1 418 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 DCAF17Q5H9S7 520 aaPredicted RBP5.77□□□□□ -1.49
USF3-202ENST00000478658 PLD3Q8IV08 490 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 TBC1D23Q9NUY8 699 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 CTNNAL1Q9UBT7 734 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 STK38LQ9Y2H1 464 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 RPRD2Q5VT52 1461 aaKnown RBP5.77□□□□□ -1.49
USF3-202ENST00000478658 ELP1O95163 1332 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 MGRN1O60291 552 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 ABCB1P08183 1280 aaPredicted RBP5.77□□□□□ -1.49
USF3-202ENST00000478658 CAV1Q03135 178 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 CC2D2BQ6DHV5 1058 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 TRIM67Q6ZTA4 783 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 PEX26Q7Z412 305 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 DEPTORQ8TB45 409 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 MYCBPAPQ8TBZ2 947 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 ZFP69BQ9UJL9 534 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 GGA2Q9UJY4 613 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 L1RE1Q9UN81 338 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 ZMYM3Q14202 1370 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 A8MXQ7 604 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 TM9SF1O15321 606 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 STX11O75558 287 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 HLA-DRAP01903 254 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 OSBPP22059 807 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 GNL1P36915 607 aaPredicted RBP5.77□□□□□ -1.49
USF3-202ENST00000478658 DAB2P98082 770 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 PDE1BQ01064 536 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 SMCO1Q147U7 214 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 ARMCX5Q6P1M9 558 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 GDAP1Q8TB36 358 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 SERPINB13Q9UIV8 391 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 APPL1Q9UKG1 709 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 GON4LQ3T8J9 2241 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 MSH6P52701 1360 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 MEI4A8MW99 385 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 NEMP1O14524 444 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 GADD45BO75293 160 aaPredicted RBP5.77□□□□□ -1.49
USF3-202ENST00000478658 MSH3P20585 1137 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 SERPINB1P30740 379 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 STAT2P52630 851 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 CDC42EP1Q00587 391 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 GNA13Q14344 377 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 RPS6KA1Q15418 735 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 EIF2S3LQ2VIR3 472 aaKnown RBP5.77□□□□□ -1.49
USF3-202ENST00000478658 FAR1Q8WVX9 515 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 ULK4Q96C45 1275 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 ASIC4Q96FT7 647 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 PANX2Q96RD6 677 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 ZC3H12CQ9C0D7 883 aaKnown RBP5.77□□□□□ -1.49
USF3-202ENST00000478658 OGFRQ9NZT2 677 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 HACD3Q9P035 362 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.77□□□□□ -1.49
USF3-202ENST00000478658 STX8Q9UNK0 236 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 NSD2O96028 1365 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 LRRC14BA6NHZ5 514 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 ENTPD5O75356 428 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 LDHBP07195 334 aaKnown RBP5.77□□□□□ -1.49
USF3-202ENST00000478658 MYBPC2Q14324 1141 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 TTBK2Q6IQ55 1244 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 TRMT10CQ7L0Y3 403 aaKnown RBP5.77□□□□□ -1.49
USF3-202ENST00000478658 CRLF3Q8IUI8 442 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 SH3KBP1Q96B97 665 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 THOC1Q96FV9 657 aaKnown RBP5.77□□□□□ -1.49
USF3-202ENST00000478658 TBC1D32Q96NH3 1257 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms