RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 RPS6KA5O75582 802 aa26.93■■□□□ 1.9
CPNE1-223ENST00000475146 IGFBP4P22692 258 aa26.93■■□□□ 1.9
CPNE1-223ENST00000475146 CRYBB1P53674 252 aaPredicted RBP26.93■■□□□ 1.9
CPNE1-223ENST00000475146 CYP4A11Q02928 519 aa26.93■■□□□ 1.9
CPNE1-223ENST00000475146 ANO5Q75V66 913 aa26.93■■□□□ 1.9
CPNE1-223ENST00000475146 TMEM40Q8WWA1 233 aa26.93■■□□□ 1.9
CPNE1-223ENST00000475146 DYDC2Q96IM9 177 aa26.93■■□□□ 1.9
CPNE1-223ENST00000475146 SCLT1Q96NL6 688 aa26.93■■□□□ 1.9
CPNE1-223ENST00000475146 TMEM60Q9H2L4 133 aa26.93■■□□□ 1.9
CPNE1-223ENST00000475146 NOL7Q9UMY1 257 aaKnown RBP26.93■■□□□ 1.9
CPNE1-223ENST00000475146 NOC2LQ9Y3T9 749 aaKnown RBP26.93■■□□□ 1.9
CPNE1-223ENST00000475146 ENPP3O14638 875 aa26.92■■□□□ 1.9
CPNE1-223ENST00000475146 NLRP11P59045 1033 aaKnown RBP26.92■■□□□ 1.9
CPNE1-223ENST00000475146 ADGRE1Q14246 886 aa26.92■■□□□ 1.9
CPNE1-223ENST00000475146 CTTNQ14247 550 aaKnown RBP26.92■■□□□ 1.9
CPNE1-223ENST00000475146 ZNF174Q15697 407 aa26.92■■□□□ 1.9
CPNE1-223ENST00000475146 TTC38Q5R3I4 469 aa26.92■■□□□ 1.9
CPNE1-223ENST00000475146 ODR4Q5SWX8 454 aa26.92■■□□□ 1.9
CPNE1-223ENST00000475146 SPRED2Q7Z698 418 aa26.92■■□□□ 1.9
CPNE1-223ENST00000475146 MTMR9Q96QG7 549 aa26.92■■□□□ 1.9
CPNE1-223ENST00000475146 WRAP73Q9P2S5 460 aaPredicted RBP26.92■■□□□ 1.9
CPNE1-223ENST00000475146 GPR32O75388 356 aa26.91■■□□□ 1.9
CPNE1-223ENST00000475146 GJB2P29033 226 aa26.91■■□□□ 1.9
CPNE1-223ENST00000475146 HTRA4P83105 476 aaPredicted RBP26.91■■□□□ 1.9
CPNE1-223ENST00000475146 TPH2Q8IWU9 490 aa26.91■■□□□ 1.9
CPNE1-223ENST00000475146 C4orf19Q8IY42 314 aa26.91■■□□□ 1.9
CPNE1-223ENST00000475146 LINC01599Q8WXQ3 324 aa26.91■■□□□ 1.9
CPNE1-223ENST00000475146 ZNF668Q96K58 619 aaPredicted RBP26.91■■□□□ 1.9
CPNE1-223ENST00000475146 EIF2AK1Q9BQI3 630 aaKnown RBP26.91■■□□□ 1.9
CPNE1-223ENST00000475146 ZSWIM4Q9H7M6 989 aa26.91■■□□□ 1.9
CPNE1-223ENST00000475146 ERVK-5Q9HDB9 667 aa26.91■■□□□ 1.9
CPNE1-223ENST00000475146 CYP26B1Q9NR63 512 aa26.91■■□□□ 1.9
CPNE1-223ENST00000475146 SMC3Q9UQE7 1217 aa26.91■■□□□ 1.9
CPNE1-223ENST00000475146 LINC01553A4QN01 128 aa26.9■■□□□ 1.9
CPNE1-223ENST00000475146 RFXAPO00287 272 aa26.9■■□□□ 1.9
CPNE1-223ENST00000475146 GPR182O15218 404 aa26.9■■□□□ 1.9
CPNE1-223ENST00000475146 NPEPPSP55786 919 aa26.9■■□□□ 1.9
CPNE1-223ENST00000475146 ORC2Q13416 577 aaPredicted RBP26.9■■□□□ 1.9
CPNE1-223ENST00000475146 DRP2Q13474 957 aa26.9■■□□□ 1.9
CPNE1-223ENST00000475146 MCTP1Q6DN14 999 aa26.9■■□□□ 1.9
CPNE1-223ENST00000475146 CEP170P1Q96L14 293 aa26.9■■□□□ 1.9
CPNE1-223ENST00000475146 CEP89Q96ST8 783 aa26.9■■□□□ 1.9
CPNE1-223ENST00000475146 MTUS1Q9ULD2 1270 aa26.9■■□□□ 1.9
CPNE1-223ENST00000475146 ST3GAL5Q9UNP4 418 aa26.9■■□□□ 1.9
CPNE1-223ENST00000475146 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.9■■□□□ 1.9
CPNE1-223ENST00000475146 EPOPA6NHQ4 379 aa26.89■■□□□ 1.9
CPNE1-223ENST00000475146 OR52Z1P0C646 297 aa26.89■■□□□ 1.9
CPNE1-223ENST00000475146 U2AF2P26368 475 aaKnown RBP eCLIP26.89■■□□□ 1.93e-26■□□□□ 9.9
CPNE1-223ENST00000475146 YWHABP31946 246 aaKnown RBP26.89■■□□□ 1.9
CPNE1-223ENST00000475146 TRAPPC10P48553 1259 aa26.89■■□□□ 1.9
CPNE1-223ENST00000475146 DNM2P50570 870 aa26.89■■□□□ 1.9
CPNE1-223ENST00000475146 FAM228AQ86W67 206 aa26.89■■□□□ 1.9
CPNE1-223ENST00000475146 ZNF710Q8N1W2 664 aa26.89■■□□□ 1.9
CPNE1-223ENST00000475146 NEK9Q8TD19 979 aa26.89■■□□□ 1.9
CPNE1-223ENST00000475146 TGS1Q96RS0 853 aaKnown RBP26.89■■□□□ 1.9
CPNE1-223ENST00000475146 JPH2Q9BR39 696 aaPredicted RBP26.89■■□□□ 1.9
CPNE1-223ENST00000475146 ADAMTS10Q9H324 1103 aa26.89■■□□□ 1.9
CPNE1-223ENST00000475146 TMX1Q9H3N1 280 aa26.89■■□□□ 1.9
CPNE1-223ENST00000475146 POTEMA6NI47 508 aa26.88■■□□□ 1.89
CPNE1-223ENST00000475146 H3BQV1 296 aa26.88■■□□□ 1.89
CPNE1-223ENST00000475146 MAFO75444 373 aaPredicted RBP26.88■■□□□ 1.89
CPNE1-223ENST00000475146 IBSPP21815 317 aaPredicted RBP26.88■■□□□ 1.89
CPNE1-223ENST00000475146 GPC3P51654 580 aa26.88■■□□□ 1.89
CPNE1-223ENST00000475146 OTUD6AQ7L8S5 288 aa26.88■■□□□ 1.89
CPNE1-223ENST00000475146 RTN4RL1Q86UN2 441 aaPredicted RBP26.88■■□□□ 1.89
CPNE1-223ENST00000475146 SP7Q8TDD2 431 aaPredicted RBP26.88■■□□□ 1.89
CPNE1-223ENST00000475146 NLRP7Q8WX94 980 aa26.88■■□□□ 1.89
CPNE1-223ENST00000475146 SLC7A3Q8WY07 619 aa26.88■■□□□ 1.89
CPNE1-223ENST00000475146 TSPYL2Q9H2G4 693 aaPredicted RBP26.88■■□□□ 1.89
CPNE1-223ENST00000475146 IGKV6-21A0A0C4DH24 114 aa26.87■■□□□ 1.89
CPNE1-223ENST00000475146 DENND3A2RUS2 1198 aa26.87■■□□□ 1.89
CPNE1-223ENST00000475146 POLGP54098 1239 aaPredicted RBP26.87■■□□□ 1.89
CPNE1-223ENST00000475146 NBR1Q14596 966 aa26.87■■□□□ 1.89
CPNE1-223ENST00000475146 XKR9Q5GH70 373 aa26.87■■□□□ 1.89
CPNE1-223ENST00000475146 SLC17A8Q8NDX2 589 aa26.87■■□□□ 1.89
CPNE1-223ENST00000475146 PPM1EQ8WY54 764 aa26.87■■□□□ 1.89
CPNE1-223ENST00000475146 SUCLA2Q9P2R7 463 aaPredicted RBP26.87■■□□□ 1.89
CPNE1-223ENST00000475146 SLITRK3O94933 977 aa26.86■■□□□ 1.89
CPNE1-223ENST00000475146 ERVK-21P61565 698 aa26.86■■□□□ 1.89
CPNE1-223ENST00000475146 ZNF579Q8NAF0 562 aaKnown RBP26.86■■□□□ 1.89
CPNE1-223ENST00000475146 BMP2KQ9NSY1 1161 aaPredicted RBP26.86■■□□□ 1.89
CPNE1-223ENST00000475146 PPME1Q9Y570 386 aa26.86■■□□□ 1.89
CPNE1-223ENST00000475146 TTC3P53804 2025 aa26.85■■□□□ 1.89
CPNE1-223ENST00000475146 MGEA5O60502 916 aa26.85■■□□□ 1.89
CPNE1-223ENST00000475146 EIF4BP23588 611 aaKnown RBP26.85■■□□□ 1.89
CPNE1-223ENST00000475146 RFC5P40937 340 aa26.85■■□□□ 1.89
CPNE1-223ENST00000475146 TECP42680 631 aa26.85■■□□□ 1.89
CPNE1-223ENST00000475146 NPAS4Q8IUM7 802 aa26.85■■□□□ 1.89
CPNE1-223ENST00000475146 MICALL1Q8N3F8 863 aa26.85■■□□□ 1.89
CPNE1-223ENST00000475146 CCDC43Q96MW1 224 aaKnown RBP26.85■■□□□ 1.89
CPNE1-223ENST00000475146 ADAM2Q99965 735 aa26.85■■□□□ 1.89
CPNE1-223ENST00000475146 HSD17B14Q9BPX1 270 aa26.85■■□□□ 1.89
CPNE1-223ENST00000475146 C17orf80Q9BSJ5 609 aa26.85■■□□□ 1.89
CPNE1-223ENST00000475146 LRFN2Q9ULH4 789 aa26.85■■□□□ 1.89
CPNE1-223ENST00000475146 ZBTB39O15060 712 aa26.84■■□□□ 1.89
CPNE1-223ENST00000475146 GTPBP6O43824 516 aaPredicted RBP26.84■■□□□ 1.89
CPNE1-223ENST00000475146 STAG3L1P0CL83 205 aa26.84■■□□□ 1.89
CPNE1-223ENST00000475146 DARSP14868 501 aaKnown RBP26.84■■□□□ 1.89
CPNE1-223ENST00000475146 CDC42EP1Q00587 391 aa26.84■■□□□ 1.89
CPNE1-223ENST00000475146 FAM43BQ6ZT52 329 aaPredicted RBP26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms