RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 CSRNP2Q9H175 543 aa6.62□□□□□ -1.35
ATPAF1-204ENST00000474020 SEMA6CQ9H3T2 930 aa6.62□□□□□ -1.35
ATPAF1-204ENST00000474020 MAGEF1Q9HAY2 307 aa6.62□□□□□ -1.35
ATPAF1-204ENST00000474020 C6orf50Q9HD87 102 aa6.62□□□□□ -1.35
ATPAF1-204ENST00000474020 KCND1Q9NSA2 647 aa6.62□□□□□ -1.35
ATPAF1-204ENST00000474020 KRT82Q9NSB4 513 aa6.62□□□□□ -1.35
ATPAF1-204ENST00000474020 TMEM39AQ9NV64 488 aa6.62□□□□□ -1.35
ATPAF1-204ENST00000474020 GPN3Q9UHW5 284 aaPredicted RBP6.62□□□□□ -1.35
ATPAF1-204ENST00000474020 NRBP1Q9UHY1 535 aa6.62□□□□□ -1.35
ATPAF1-204ENST00000474020 MAN1B1Q9UKM7 699 aa6.62□□□□□ -1.35
ATPAF1-204ENST00000474020 PCDHA4Q9UN74 947 aa6.62□□□□□ -1.35
ATPAF1-204ENST00000474020 SUGT1Q9Y2Z0 365 aa6.62□□□□□ -1.35
ATPAF1-204ENST00000474020 PCDHB6Q9Y5E3 794 aa6.62□□□□□ -1.35
ATPAF1-204ENST00000474020 PCDHA5Q9Y5H7 936 aa6.62□□□□□ -1.35
ATPAF1-204ENST00000474020 AFF2P51816 1311 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 SYNRGQ9UMZ2 1314 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 MYH13Q9UKX3 1938 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 VWA3AA6NCI4 1184 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 SERPINB2P05120 415 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 HLA-DOAP06340 250 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 NFICP08651 508 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 GSTP1P09211 210 aaKnown RBP6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 IL1R1P14778 569 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 FOSL1P15407 271 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 KLRK1P26718 216 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 SMARCA1P28370 1054 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 TM4SF1P30408 202 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 HOXA10P31260 410 aaPredicted RBP6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 HOXA7P31268 230 aaPredicted RBP6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 ADMP35318 185 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 PPP1R2P41236 205 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 STAT6P42226 847 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 BTDP43251 543 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 ASPAP45381 313 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 TOB1P50616 345 aaPredicted RBP6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 GPSM2P81274 684 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 FMR1Q06787 632 aaKnown RBP eCLIP6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 MORC3Q14149 939 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 ZNF174Q15697 407 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 PKN1Q16512 942 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 CCDC144BQ3MJ40 725 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 MFSD14BQ5SR56 506 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 NT5DC1Q5TFE4 455 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 PRR5LQ6MZQ0 368 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 NXPE4Q6UWF7 544 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 PIK3AP1Q6ZUJ8 805 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 HEATR3Q7Z4Q2 680 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 HOMER1Q86YM7 354 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 VSTM4Q8IW00 320 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 SHISA5Q8N114 240 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 CCAR2Q8N163 923 aaKnown RBP6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 C17orf53Q8N3J3 647 aaPredicted RBP6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 PDCL2Q8N4E4 241 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 PDILTQ8N807 584 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 DAGLBQ8NCG7 672 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 FLAD1Q8NFF5 587 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 SH3RF3Q8TEJ3 882 aaPredicted RBP6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 FBF1Q8TES7 1133 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 TGFBRAP1Q8WUH2 860 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 ERCC4Q92889 916 aaPredicted RBP6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 GATA6Q92908 595 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 ASB16Q96NS5 453 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 EYA3Q99504 573 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 COA1Q9GZY4 146 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 CUEDC2Q9H467 287 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 CCDC86Q9H6F5 360 aaKnown RBP6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 CD209Q9NNX6 404 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 STX8Q9UNK0 236 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 TACC3Q9Y6A5 838 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 EP400Q96L91 3159 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 CACNA1SQ13698 1873 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 A0A1B0GUL6 1792 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 LAMB1P07942 1786 aa6.61□□□□□ -1.35
ATPAF1-204ENST00000474020 CCDC88AQ3V6T2 1871 aa6.6□□□□□ -1.35
ATPAF1-204ENST00000474020 MYO5AQ9Y4I1 1855 aaKnown RBP6.6□□□□□ -1.35
ATPAF1-204ENST00000474020 GPR75-ASB3A0A0A6YYF3 556 aa6.6□□□□□ -1.35
ATPAF1-204ENST00000474020 TMPRSS2O15393 492 aa6.6□□□□□ -1.35
ATPAF1-204ENST00000474020 ARHGAP6O43182 974 aa6.6□□□□□ -1.35
ATPAF1-204ENST00000474020 CYP2D6P10635 497 aa6.6□□□□□ -1.35
ATPAF1-204ENST00000474020 ALDH1B1P30837 517 aa6.6□□□□□ -1.35
ATPAF1-204ENST00000474020 MCM7P33993 719 aa6.6□□□□□ -1.35
ATPAF1-204ENST00000474020 PDE6BP35913 854 aa6.6□□□□□ -1.35
ATPAF1-204ENST00000474020 UBA7P41226 1012 aa6.6□□□□□ -1.35
ATPAF1-204ENST00000474020 NAPAP54920 295 aa6.6□□□□□ -1.35
ATPAF1-204ENST00000474020 GP2P55259 537 aaKnown RBP6.6□□□□□ -1.35
ATPAF1-204ENST00000474020 AMPD3Q01432 767 aa6.6□□□□□ -1.35
ATPAF1-204ENST00000474020 TRIM14Q14142 442 aa6.6□□□□□ -1.35
ATPAF1-204ENST00000474020 TMEM266Q2M3C6 531 aa6.6□□□□□ -1.35
ATPAF1-204ENST00000474020 KIF4BQ2VIQ3 1234 aa6.6□□□□□ -1.35
ATPAF1-204ENST00000474020 CRY2Q49AN0 593 aa6.6□□□□□ -1.35
ATPAF1-204ENST00000474020 SPECC1Q5M775 1068 aa6.6□□□□□ -1.35
ATPAF1-204ENST00000474020 LCE1DQ5T752 114 aa6.6□□□□□ -1.35
ATPAF1-204ENST00000474020 SPATA1Q5VX52 437 aa6.6□□□□□ -1.35
ATPAF1-204ENST00000474020 SPECC1LQ69YQ0 1117 aa6.6□□□□□ -1.35
ATPAF1-204ENST00000474020 WWC2Q6AWC2 1192 aa6.6□□□□□ -1.35
ATPAF1-204ENST00000474020 ISM2Q6H9L7 571 aa6.6□□□□□ -1.35
ATPAF1-204ENST00000474020 MAPKAPK5Q8IW41 473 aa6.6□□□□□ -1.35
ATPAF1-204ENST00000474020 SP8Q8IXZ3 490 aa6.6□□□□□ -1.35
ATPAF1-204ENST00000474020 SRBD1Q8N5C6 995 aaKnown RBP6.6□□□□□ -1.35
ATPAF1-204ENST00000474020 WDR89Q96FK6 387 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms