RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 RDM1Q8NG50 284 aa10.17□□□□□ -0.78
USF1-204ENST00000472217 CLP1Q92989 425 aaKnown RBP10.17□□□□□ -0.78
USF1-204ENST00000472217 GTF3C6Q969F1 213 aa10.17□□□□□ -0.78
USF1-204ENST00000472217 UHRF1Q96T88 793 aaPredicted RBP10.17□□□□□ -0.78
USF1-204ENST00000472217 OSMRQ99650 979 aa10.17□□□□□ -0.78
USF1-204ENST00000472217 KCNMB3Q9NPA1 279 aa10.17□□□□□ -0.78
USF1-204ENST00000472217 NRBP2Q9NSY0 501 aa10.17□□□□□ -0.78
USF1-204ENST00000472217 ST3GAL5Q9UNP4 418 aa10.17□□□□□ -0.78
USF1-204ENST00000472217 AKT3Q9Y243 479 aa10.17□□□□□ -0.78
USF1-204ENST00000472217 EVPLQ92817 2033 aa10.17□□□□□ -0.78
USF1-204ENST00000472217 ATG2AQ2TAZ0 1938 aa10.17□□□□□ -0.78
USF1-204ENST00000472217 DENND3A2RUS2 1198 aa10.16□□□□□ -0.78
USF1-204ENST00000472217 TMEM150BA6NC51 233 aa10.16□□□□□ -0.78
USF1-204ENST00000472217 FAM205CA6NFA0 338 aa10.16□□□□□ -0.78
USF1-204ENST00000472217 C5orf67F2Z3F1 127 aa10.16□□□□□ -0.78
USF1-204ENST00000472217 TNFRSF10AO00220 468 aa10.16□□□□□ -0.78
USF1-204ENST00000472217 GPR182O15218 404 aa10.16□□□□□ -0.78
USF1-204ENST00000472217 EIF5BO60841 1220 aaKnown RBP10.16□□□□□ -0.78
USF1-204ENST00000472217 STAG3L1P0CL83 205 aa10.16□□□□□ -0.78
USF1-204ENST00000472217 GCFC2P16383 781 aaKnown RBP10.16□□□□□ -0.78
USF1-204ENST00000472217 IBSPP21815 317 aaPredicted RBP10.16□□□□□ -0.78
USF1-204ENST00000472217 BMPR1AP36894 532 aa10.16□□□□□ -0.78
USF1-204ENST00000472217 SARSP49591 514 aaKnown RBP10.16□□□□□ -0.78
USF1-204ENST00000472217 GATMP50440 423 aa10.16□□□□□ -0.78
USF1-204ENST00000472217 NLRP11P59045 1033 aaKnown RBP10.16□□□□□ -0.78
USF1-204ENST00000472217 TBC1D8BQ0IIM8 1120 aa10.16□□□□□ -0.78
USF1-204ENST00000472217 PAN2Q504Q3 1202 aaKnown RBP10.16□□□□□ -0.78
USF1-204ENST00000472217 TIGD5Q53EQ6 642 aa10.16□□□□□ -0.78
USF1-204ENST00000472217 EARS2Q5JPH6 523 aaKnown RBP10.16□□□□□ -0.78
USF1-204ENST00000472217 ODR4Q5SWX8 454 aa10.16□□□□□ -0.78
USF1-204ENST00000472217 PPP4R3AQ6IN85 833 aa10.16□□□□□ -0.78
USF1-204ENST00000472217 EFCAB12Q6NXP0 572 aa10.16□□□□□ -0.78
USF1-204ENST00000472217 PIK3AP1Q6ZUJ8 805 aa10.16□□□□□ -0.78
USF1-204ENST00000472217 NEK8Q86SG6 692 aa10.16□□□□□ -0.78
USF1-204ENST00000472217 FAM228AQ86W67 206 aa10.16□□□□□ -0.78
USF1-204ENST00000472217 CMTR2Q8IYT2 770 aaKnown RBP10.16□□□□□ -0.78
USF1-204ENST00000472217 BANK1Q8NDB2 785 aa10.16□□□□□ -0.78
USF1-204ENST00000472217 NSUN7Q8NE18 718 aaKnown RBP10.16□□□□□ -0.78
USF1-204ENST00000472217 WASF1Q92558 559 aa10.16□□□□□ -0.78
USF1-204ENST00000472217 NECAB3Q96P71 396 aaPredicted RBP10.16□□□□□ -0.78
USF1-204ENST00000472217 MAP7D2Q96T17 732 aa10.16□□□□□ -0.78
USF1-204ENST00000472217 ADAM2Q99965 735 aa10.16□□□□□ -0.78
USF1-204ENST00000472217 C11orf84Q9BUA3 381 aaPredicted RBP10.16□□□□□ -0.78
USF1-204ENST00000472217 ADAMTS10Q9H324 1103 aa10.16□□□□□ -0.78
USF1-204ENST00000472217 SEPT9Q9UHD8 586 aaPredicted RBP10.16□□□□□ -0.78
USF1-204ENST00000472217 RWDD3Q9Y3V2 267 aa10.16□□□□□ -0.78
USF1-204ENST00000472217 MRPL42Q9Y6G3 142 aaKnown RBP10.16□□□□□ -0.78
USF1-204ENST00000472217 REV3LO60673 3130 aa10.15□□□□□ -0.78
USF1-204ENST00000472217 C9IYK1 514 aa10.15□□□□□ -0.78
USF1-204ENST00000472217 EML1O00423 815 aa10.15□□□□□ -0.78
USF1-204ENST00000472217 GRM6O15303 877 aa10.15□□□□□ -0.78
USF1-204ENST00000472217 CCNT1O60563 726 aaKnown RBP10.15□□□□□ -0.78
USF1-204ENST00000472217 STBD1O95210 358 aa10.15□□□□□ -0.78
USF1-204ENST00000472217 RB1P06400 928 aa10.15□□□□□ -0.78
USF1-204ENST00000472217 TMOD1P28289 359 aa10.15□□□□□ -0.78
USF1-204ENST00000472217 NR5A1Q13285 461 aa10.15□□□□□ -0.78
USF1-204ENST00000472217 PPP2R5CQ13362 524 aa10.15□□□□□ -0.78
USF1-204ENST00000472217 TARBP2Q15633 366 aaKnown RBP10.15□□□□□ -0.78
USF1-204ENST00000472217 MTERF2Q49AM1 385 aa10.15□□□□□ -0.78
USF1-204ENST00000472217 XKR3Q5GH77 459 aa10.15□□□□□ -0.78
USF1-204ENST00000472217 FAM43BQ6ZT52 329 aaPredicted RBP10.15□□□□□ -0.78
USF1-204ENST00000472217 SLC24A5Q71RS6 500 aa10.15□□□□□ -0.78
USF1-204ENST00000472217 TNFRSF25Q93038 417 aa10.15□□□□□ -0.78
USF1-204ENST00000472217 ZNF668Q96K58 619 aaPredicted RBP10.15□□□□□ -0.78
USF1-204ENST00000472217 CEP89Q96ST8 783 aa10.15□□□□□ -0.78
USF1-204ENST00000472217 SH2D3AQ9BRG2 576 aa10.15□□□□□ -0.78
USF1-204ENST00000472217 NIFKQ9BYG3 293 aaKnown RBP10.15□□□□□ -0.78
USF1-204ENST00000472217 UBE2ZQ9H832 354 aaPredicted RBP10.15□□□□□ -0.78
USF1-204ENST00000472217 RGS18Q9NS28 235 aa10.15□□□□□ -0.78
USF1-204ENST00000472217 C1orf112Q9NSG2 853 aa10.15□□□□□ -0.78
USF1-204ENST00000472217 VAV3Q9UKW4 847 aa10.15□□□□□ -0.78
USF1-204ENST00000472217 LRFN2Q9ULH4 789 aa10.15□□□□□ -0.78
USF1-204ENST00000472217 A0A0C4DFX4 3053 aa10.14□□□□□ -0.79
USF1-204ENST00000472217 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.14□□□□□ -0.79
USF1-204ENST00000472217 JAK2O60674 1132 aa10.14□□□□□ -0.79
USF1-204ENST00000472217 EIF4BP23588 611 aaKnown RBP10.14□□□□□ -0.79
USF1-204ENST00000472217 KRT2P35908 639 aa10.14□□□□□ -0.79
USF1-204ENST00000472217 GPC3P51654 580 aa10.14□□□□□ -0.79
USF1-204ENST00000472217 ST3GAL1Q11201 340 aa10.14□□□□□ -0.79
USF1-204ENST00000472217 DRP2Q13474 957 aa10.14□□□□□ -0.79
USF1-204ENST00000472217 DSC3Q14574 896 aa10.14□□□□□ -0.79
USF1-204ENST00000472217 TCEAL5Q5H9L2 206 aa10.14□□□□□ -0.79
USF1-204ENST00000472217 ANO5Q75V66 913 aa10.14□□□□□ -0.79
USF1-204ENST00000472217 HAS1Q92839 578 aa10.14□□□□□ -0.79
USF1-204ENST00000472217 P2RX5Q93086 422 aa10.14□□□□□ -0.79
USF1-204ENST00000472217 FAM20AQ96MK3 541 aa10.14□□□□□ -0.79
USF1-204ENST00000472217 SCLT1Q96NL6 688 aa10.14□□□□□ -0.79
USF1-204ENST00000472217 NAP1L4Q99733 375 aaKnown RBP10.14□□□□□ -0.79
USF1-204ENST00000472217 PLVAPQ9BX97 442 aa10.14□□□□□ -0.79
USF1-204ENST00000472217 LMAN2LQ9H0V9 348 aa10.14□□□□□ -0.79
USF1-204ENST00000472217 NSUN3Q9H649 340 aaKnown RBP10.14□□□□□ -0.79
USF1-204ENST00000472217 BRMS1Q9HCU9 246 aa10.14□□□□□ -0.79
USF1-204ENST00000472217 ALG13Q9NP73 1137 aaKnown RBP10.14□□□□□ -0.79
USF1-204ENST00000472217 PCDHB7Q9Y5E2 793 aa10.14□□□□□ -0.79
USF1-204ENST00000472217 FNDC1Q4ZHG4 1894 aaPredicted RBP10.14□□□□□ -0.79
USF1-204ENST00000472217 SPTBN5Q9NRC6 3674 aaKnown RBP10.14□□□□□ -0.79
USF1-204ENST00000472217 TCF20Q9UGU0 1960 aaKnown RBP10.14□□□□□ -0.79
USF1-204ENST00000472217 IGKV6-21A0A0C4DH24 114 aa10.13□□□□□ -0.79
USF1-204ENST00000472217 DDX11L8A8MPP1 907 aa10.13□□□□□ -0.79
USF1-204ENST00000472217 TBX3O15119 743 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms