RNA–Protein interactions for RNA: ENST00000471117.5

FDPS-209, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-209ENST00000471117 CDHR1Q96JP9 859 aa9.3□□□□□ -0.92
FDPS-209ENST00000471117 ZNF577Q9BSK1 485 aa9.3□□□□□ -0.92
FDPS-209ENST00000471117 WDR11Q9BZH6 1224 aa9.3□□□□□ -0.92
FDPS-209ENST00000471117 TRIM9Q9C026 710 aa9.3□□□□□ -0.92
FDPS-209ENST00000471117 NT5C3AQ9H0P0 336 aa9.3□□□□□ -0.92
FDPS-209ENST00000471117 KCNH7Q9NS40 1196 aa9.3□□□□□ -0.92
FDPS-209ENST00000471117 VAV3Q9UKW4 847 aa9.3□□□□□ -0.92
FDPS-209ENST00000471117 STK24Q9Y6E0 443 aa9.3□□□□□ -0.92
FDPS-209ENST00000471117 C5orf42Q9H799 3197 aa9.3□□□□□ -0.92
FDPS-209ENST00000471117 ASTN1O14525 1302 aa9.3□□□□□ -0.92
FDPS-209ENST00000471117 POTEB3A0JP26 581 aa9.29□□□□□ -0.92
FDPS-209ENST00000471117 MYMKA6NI61 221 aa9.29□□□□□ -0.92
FDPS-209ENST00000471117 IPO5O00410 1097 aaKnown RBP9.29□□□□□ -0.92
FDPS-209ENST00000471117 EML1O00423 815 aa9.29□□□□□ -0.92
FDPS-209ENST00000471117 MSCO60682 206 aa9.29□□□□□ -0.92
FDPS-209ENST00000471117 GAS7O60861 476 aa9.29□□□□□ -0.92
FDPS-209ENST00000471117 COBLO75128 1261 aa9.29□□□□□ -0.92
FDPS-209ENST00000471117 MED24O75448 989 aa9.29□□□□□ -0.92
FDPS-209ENST00000471117 PSMD10O75832 226 aa9.29□□□□□ -0.92
FDPS-209ENST00000471117 RHOBTB3O94955 611 aa9.29□□□□□ -0.92
FDPS-209ENST00000471117 CYP2C19P33261 490 aa9.29□□□□□ -0.92
FDPS-209ENST00000471117 ASIC1P78348 528 aa9.29□□□□□ -0.92
FDPS-209ENST00000471117 SEMA3FQ13275 785 aa9.29□□□□□ -0.92
FDPS-209ENST00000471117 ZNF792Q3KQV3 632 aa9.29□□□□□ -0.92
FDPS-209ENST00000471117 HS1BP3Q53T59 392 aa9.29□□□□□ -0.92
FDPS-209ENST00000471117 HAUS3Q68CZ6 603 aa9.29□□□□□ -0.92
FDPS-209ENST00000471117 KLHL10Q6JEL2 608 aa9.29□□□□□ -0.92
FDPS-209ENST00000471117 POTEBQ6S5H4 581 aa9.29□□□□□ -0.92
FDPS-209ENST00000471117 ZNF467Q7Z7K2 595 aaPredicted RBP9.29□□□□□ -0.92
FDPS-209ENST00000471117 FGD4Q96M96 766 aa9.29□□□□□ -0.92
FDPS-209ENST00000471117 INPP4AQ96PE3 977 aaPredicted RBP9.29□□□□□ -0.92
FDPS-209ENST00000471117 MED15Q96RN5 788 aa9.29□□□□□ -0.92
FDPS-209ENST00000471117 RIT2Q99578 217 aa9.29□□□□□ -0.92
FDPS-209ENST00000471117 APBA2Q99767 749 aa9.29□□□□□ -0.92
FDPS-209ENST00000471117 TEKT3Q9BXF9 490 aa9.29□□□□□ -0.92
FDPS-209ENST00000471117 LRRC27Q9C0I9 530 aa9.29□□□□□ -0.92
FDPS-209ENST00000471117 HSD3B7Q9H2F3 369 aa9.29□□□□□ -0.92
FDPS-209ENST00000471117 AGO4Q9HCK5 861 aaKnown RBP9.29□□□□□ -0.92
FDPS-209ENST00000471117 TBC1D22BQ9NU19 505 aa9.29□□□□□ -0.92
FDPS-209ENST00000471117 FANCLQ9NW38 375 aa9.29□□□□□ -0.92
FDPS-209ENST00000471117 TCEAL9Q9UHQ7 104 aa9.29□□□□□ -0.92
FDPS-209ENST00000471117 RALYQ9UKM9 306 aaKnown RBP9.29□□□□□ -0.92
FDPS-209ENST00000471117 KIAA1024Q9UPX6 916 aa9.29□□□□□ -0.92
FDPS-209ENST00000471117 DIS3Q9Y2L1 958 aaKnown RBP9.29□□□□□ -0.92
FDPS-209ENST00000471117 GDAQ9Y2T3 454 aa9.29□□□□□ -0.92
FDPS-209ENST00000471117 MYH9P35579 1960 aaKnown RBP9.29□□□□□ -0.92
FDPS-209ENST00000471117 COL4A6Q14031 1691 aa9.29□□□□□ -0.92
FDPS-209ENST00000471117 LOXHD1Q8IVV2 1947 aa9.29□□□□□ -0.92
FDPS-209ENST00000471117 SETXQ7Z333 2677 aaKnown RBP9.28□□□□□ -0.92
FDPS-209ENST00000471117 EPOPA6NHQ4 379 aa9.28□□□□□ -0.92
FDPS-209ENST00000471117 SPATA31C2B4DYI2 1134 aa9.28□□□□□ -0.92
FDPS-209ENST00000471117 E9PMD0 336 aa9.28□□□□□ -0.92
FDPS-209ENST00000471117 SSBP05455 408 aaKnown RBP eCLIP9.28□□□□□ -0.92
FDPS-209ENST00000471117 PLA2G4BP0C869 781 aa9.28□□□□□ -0.92
FDPS-209ENST00000471117 SPATA31C1P0DKV0 1188 aa9.28□□□□□ -0.92
FDPS-209ENST00000471117 IL9P15248 144 aa9.28□□□□□ -0.92
FDPS-209ENST00000471117 CSF2RAP15509 400 aa9.28□□□□□ -0.92
FDPS-209ENST00000471117 RPA1P27694 616 aa9.28□□□□□ -0.92
FDPS-209ENST00000471117 ICAM3P32942 547 aa9.28□□□□□ -0.92
FDPS-209ENST00000471117 STX17P56962 302 aa9.28□□□□□ -0.92
FDPS-209ENST00000471117 FANCCQ00597 558 aa9.28□□□□□ -0.92
FDPS-209ENST00000471117 MAP2K5Q13163 448 aa9.28□□□□□ -0.92
FDPS-209ENST00000471117 PPP2R5CQ13362 524 aa9.28□□□□□ -0.92
FDPS-209ENST00000471117 MORN1Q5T089 497 aa9.28□□□□□ -0.92
FDPS-209ENST00000471117 CNNM4Q6P4Q7 775 aa9.28□□□□□ -0.92
FDPS-209ENST00000471117 POTEGQ6S5H5 508 aa9.28□□□□□ -0.92
FDPS-209ENST00000471117 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.28□□□□□ -0.92
FDPS-209ENST00000471117 CATSPER3Q86XQ3 398 aa9.28□□□□□ -0.92
FDPS-209ENST00000471117 SPC24Q8NBT2 197 aa9.28□□□□□ -0.92
FDPS-209ENST00000471117 MORC4Q8TE76 937 aa9.28□□□□□ -0.92
FDPS-209ENST00000471117 EIF2AK1Q9BQI3 630 aaKnown RBP9.28□□□□□ -0.92
FDPS-209ENST00000471117 POLR3CQ9BUI4 534 aaPredicted RBP9.28□□□□□ -0.92
FDPS-209ENST00000471117 EXOC1Q9NV70 894 aa9.28□□□□□ -0.92
FDPS-209ENST00000471117 PKD2L1Q9P0L9 805 aa9.28□□□□□ -0.92
FDPS-209ENST00000471117 NFE2L3Q9Y4A8 694 aa9.28□□□□□ -0.92
FDPS-209ENST00000471117 GPR179Q6PRD1 2367 aa9.28□□□□□ -0.92
FDPS-209ENST00000471117 PVALEFA0A1B0GWK0 134 aa9.27□□□□□ -0.93
FDPS-209ENST00000471117 TIMP1P01033 207 aa9.27□□□□□ -0.93
FDPS-209ENST00000471117 ATP1A3P13637 1013 aa9.27□□□□□ -0.93
FDPS-209ENST00000471117 POU3F3P20264 500 aaPredicted RBP9.27□□□□□ -0.93
FDPS-209ENST00000471117 CDC25BP30305 580 aa9.27□□□□□ -0.93
FDPS-209ENST00000471117 PRCPP42785 496 aa9.27□□□□□ -0.93
FDPS-209ENST00000471117 PSMC6P62333 389 aa9.27□□□□□ -0.93
FDPS-209ENST00000471117 FAAP100Q0VG06 881 aa9.27□□□□□ -0.93
FDPS-209ENST00000471117 PPIGQ13427 754 aaKnown RBP eCLIP9.27□□□□□ -0.934e-7■■□□□ 11.4
FDPS-209ENST00000471117 EPHA7Q15375 998 aa9.27□□□□□ -0.93
FDPS-209ENST00000471117 C1orf53Q5VUE5 145 aa9.27□□□□□ -0.93
FDPS-209ENST00000471117 SPATA1Q5VX52 437 aa9.27□□□□□ -0.93
FDPS-209ENST00000471117 KCNV1Q6PIU1 500 aa9.27□□□□□ -0.93
FDPS-209ENST00000471117 SEPT14Q6ZU15 432 aa9.27□□□□□ -0.93
FDPS-209ENST00000471117 UNC13DQ70J99 1090 aa9.27□□□□□ -0.93
FDPS-209ENST00000471117 ARMCX2Q7L311 632 aa9.27□□□□□ -0.93
FDPS-209ENST00000471117 DYMQ7RTS9 669 aa9.27□□□□□ -0.93
FDPS-209ENST00000471117 ASCL5Q7RTU5 278 aa9.27□□□□□ -0.93
FDPS-209ENST00000471117 DRC7Q8IY82 874 aa9.27□□□□□ -0.93
FDPS-209ENST00000471117 MSL3Q8N5Y2 521 aaKnown RBP9.27□□□□□ -0.93
FDPS-209ENST00000471117 GIMAP8Q8ND71 665 aaPredicted RBP9.27□□□□□ -0.93
FDPS-209ENST00000471117 NELFBQ8WX92 580 aa9.27□□□□□ -0.93
FDPS-209ENST00000471117 DDX12PQ92771 950 aa9.27□□□□□ -0.93
FDPS-209ENST00000471117 ATOH1Q92858 354 aaPredicted RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 146.5 ms