RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 PAPOLBQ9NRJ5 636 aaKnown RBP13.41□□□□□ -0.26
USP11-206ENST00000469080 ARHGEF35A5YM69 484 aa13.41□□□□□ -0.26
USP11-206ENST00000469080 CAPN15O75808 1086 aa13.41□□□□□ -0.26
USP11-206ENST00000469080 TRIM49P0CI25 452 aa13.41□□□□□ -0.26
USP11-206ENST00000469080 TRIM49CP0CI26 452 aa13.41□□□□□ -0.26
USP11-206ENST00000469080 SOX10P56693 466 aa13.41□□□□□ -0.26
USP11-206ENST00000469080 DUSP9Q99956 384 aaKnown RBP13.41□□□□□ -0.26
USP11-206ENST00000469080 MMADHCQ9H3L0 296 aaPredicted RBP13.41□□□□□ -0.26
USP11-206ENST00000469080 HAUS2Q9NVX0 235 aa13.41□□□□□ -0.26
USP11-206ENST00000469080 KRT86O43790 486 aa13.41□□□□□ -0.26
USP11-206ENST00000469080 KLRC4O43908 158 aa13.41□□□□□ -0.26
USP11-206ENST00000469080 MYL1P05976 194 aa13.41□□□□□ -0.26
USP11-206ENST00000469080 IMPDH2P12268 514 aa13.41□□□□□ -0.26
USP11-206ENST00000469080 SSTR3P32745 418 aaPredicted RBP13.41□□□□□ -0.26
USP11-206ENST00000469080 ATP1A2P50993 1020 aa13.41□□□□□ -0.26
USP11-206ENST00000469080 TLDC1Q6P9B6 456 aa13.41□□□□□ -0.26
USP11-206ENST00000469080 GIMAP8Q8ND71 665 aaPredicted RBP13.41□□□□□ -0.26
USP11-206ENST00000469080 KBTBD4Q9NVX7 518 aa13.41□□□□□ -0.26
USP11-206ENST00000469080 LGALS16A8MUM7 142 aa13.4□□□□□ -0.26
USP11-206ENST00000469080 EML1O00423 815 aa13.4□□□□□ -0.26
USP11-206ENST00000469080 NFIBO00712 420 aa13.4□□□□□ -0.26
USP11-206ENST00000469080 LGR5O75473 907 aa13.4□□□□□ -0.26
USP11-206ENST00000469080 MTMR2Q13614 643 aa13.4□□□□□ -0.26
USP11-206ENST00000469080 CIAPIN1Q6FI81 312 aa13.4□□□□□ -0.26
USP11-206ENST00000469080 CCDC121Q6ZUS5 278 aa13.4□□□□□ -0.26
USP11-206ENST00000469080 FAM81AQ8TBF8 368 aa13.4□□□□□ -0.26
USP11-206ENST00000469080 IFT81Q8WYA0 676 aa13.4□□□□□ -0.26
USP11-206ENST00000469080 AK8Q96MA6 479 aa13.4□□□□□ -0.26
USP11-206ENST00000469080 TRPC6Q9Y210 931 aa13.4□□□□□ -0.26
USP11-206ENST00000469080 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.4□□□□□ -0.26
USP11-206ENST00000469080 ARP10275 920 aa13.4□□□□□ -0.26
USP11-206ENST00000469080 CASP4P49662 377 aa13.4□□□□□ -0.26
USP11-206ENST00000469080 GABPAQ06546 454 aa13.4□□□□□ -0.26
USP11-206ENST00000469080 GRM1Q13255 1194 aa13.4□□□□□ -0.26
USP11-206ENST00000469080 HAUS3Q68CZ6 603 aa13.4□□□□□ -0.26
USP11-206ENST00000469080 LDHDQ86WU2 507 aa13.4□□□□□ -0.26
USP11-206ENST00000469080 ATL2Q8NHH9 583 aa13.4□□□□□ -0.26
USP11-206ENST00000469080 FAM167BQ9BTA0 163 aa13.4□□□□□ -0.26
USP11-206ENST00000469080 VCPKMTQ9H867 229 aa13.4□□□□□ -0.26
USP11-206ENST00000469080 TISP43B9A030 160 aa13.4□□□□□ -0.26
USP11-206ENST00000469080 EXOC3O60645 756 aa13.4□□□□□ -0.26
USP11-206ENST00000469080 ATP6V1G1O75348 118 aa13.4□□□□□ -0.26
USP11-206ENST00000469080 TTI2Q6NXR4 508 aa13.4□□□□□ -0.26
USP11-206ENST00000469080 RSBN1LQ6PCB5 846 aaPredicted RBP13.4□□□□□ -0.26
USP11-206ENST00000469080 BZW1Q7L1Q6 419 aaKnown RBP13.4□□□□□ -0.26
USP11-206ENST00000469080 P2RX7Q99572 595 aaKnown RBP13.4□□□□□ -0.26
USP11-206ENST00000469080 REEP2Q9BRK0 252 aa13.4□□□□□ -0.26
USP11-206ENST00000469080 PHACTR1Q9C0D0 580 aa13.4□□□□□ -0.26
USP11-206ENST00000469080 ZHX2Q9Y6X8 837 aa13.4□□□□□ -0.26
USP11-206ENST00000469080 SNED1Q8TER0 1413 aa13.39□□□□□ -0.27
USP11-206ENST00000469080 RHOBTB3O94955 611 aa13.39□□□□□ -0.27
USP11-206ENST00000469080 ATP1A1P05023 1023 aaKnown RBP13.39□□□□□ -0.27
USP11-206ENST00000469080 HMGCS2P54868 508 aa13.39□□□□□ -0.27
USP11-206ENST00000469080 C2orf54Q08AI8 447 aa13.39□□□□□ -0.27
USP11-206ENST00000469080 KLHL30Q0D2K2 578 aa13.39□□□□□ -0.27
USP11-206ENST00000469080 ACBD5Q5T8D3 534 aaPredicted RBP13.39□□□□□ -0.27
USP11-206ENST00000469080 CDKAL1Q5VV42 579 aa13.39□□□□□ -0.27
USP11-206ENST00000469080 UNC13DQ70J99 1090 aa13.39□□□□□ -0.27
USP11-206ENST00000469080 FAM178BQ8IXR5 827 aa13.39□□□□□ -0.27
USP11-206ENST00000469080 TRIM58Q8NG06 486 aa13.39□□□□□ -0.27
USP11-206ENST00000469080 FAM163AQ96GL9 167 aaPredicted RBP13.39□□□□□ -0.27
USP11-206ENST00000469080 WRNIP1Q96S55 665 aa13.39□□□□□ -0.27
USP11-206ENST00000469080 OSBPL9Q96SU4 736 aa13.39□□□□□ -0.27
USP11-206ENST00000469080 KIFC3Q9BVG8 833 aa13.39□□□□□ -0.27
USP11-206ENST00000469080 TRIM31Q9BZY9 425 aa13.39□□□□□ -0.27
USP11-206ENST00000469080 RAB21Q9UL25 225 aa13.39□□□□□ -0.27
USP11-206ENST00000469080 DUOX1Q9NRD9 1551 aa13.39□□□□□ -0.27
USP11-206ENST00000469080 ZSCAN9O15535 394 aaPredicted RBP13.39□□□□□ -0.27
USP11-206ENST00000469080 FGFR1OPO95684 399 aaKnown RBP13.39□□□□□ -0.27
USP11-206ENST00000469080 SLC9A1P19634 815 aa13.39□□□□□ -0.27
USP11-206ENST00000469080 MAGEA10P43363 369 aaPredicted RBP13.39□□□□□ -0.27
USP11-206ENST00000469080 ZBED6P86452 979 aa13.39□□□□□ -0.27
USP11-206ENST00000469080 COG2Q14746 738 aa13.39□□□□□ -0.27
USP11-206ENST00000469080 FAM102BQ5T8I3 360 aa13.39□□□□□ -0.27
USP11-206ENST00000469080 NBPF12Q5TAG4 269 aaPredicted RBP13.39□□□□□ -0.27
USP11-206ENST00000469080 MIER3Q7Z3K6 550 aa13.39□□□□□ -0.27
USP11-206ENST00000469080 MICALL2Q8IY33 904 aa13.39□□□□□ -0.27
USP11-206ENST00000469080 STAMBPL1Q96FJ0 436 aa13.39□□□□□ -0.27
USP11-206ENST00000469080 EIF2AK1Q9BQI3 630 aaKnown RBP13.39□□□□□ -0.27
USP11-206ENST00000469080 TAOK3Q9H2K8 898 aa13.39□□□□□ -0.27
USP11-206ENST00000469080 BTAF1O14981 1849 aa13.39□□□□□ -0.27
USP11-206ENST00000469080 FAM237AA0A1B0GTK4 181 aa13.38□□□□□ -0.27
USP11-206ENST00000469080 A0A1B0GVG6 124 aa13.38□□□□□ -0.27
USP11-206ENST00000469080 SPDYE2BA6NHP3 402 aa13.38□□□□□ -0.27
USP11-206ENST00000469080 MSH4O15457 936 aa13.38□□□□□ -0.27
USP11-206ENST00000469080 RASSF9O75901 435 aa13.38□□□□□ -0.27
USP11-206ENST00000469080 SPDYE6P0CI01 402 aa13.38□□□□□ -0.27
USP11-206ENST00000469080 GJC1P36383 396 aa13.38□□□□□ -0.27
USP11-206ENST00000469080 VWA3BQ502W6 1294 aa13.38□□□□□ -0.27
USP11-206ENST00000469080 NT5DC1Q5TFE4 455 aa13.38□□□□□ -0.27
USP11-206ENST00000469080 CWF19L1Q69YN2 538 aaKnown RBP13.38□□□□□ -0.27
USP11-206ENST00000469080 MIS18BP1Q6P0N0 1132 aa13.38□□□□□ -0.27
USP11-206ENST00000469080 CHURC1Q8WUH1 139 aa13.38□□□□□ -0.27
USP11-206ENST00000469080 TCP11Q8WWU5 503 aa13.38□□□□□ -0.27
USP11-206ENST00000469080 DHTKD1Q96HY7 919 aaPredicted RBP13.38□□□□□ -0.27
USP11-206ENST00000469080 PIM2Q9P1W9 311 aa13.38□□□□□ -0.27
USP11-206ENST00000469080 ARMCX3Q9UH62 379 aaPredicted RBP13.38□□□□□ -0.27
USP11-206ENST00000469080 GINS2Q9Y248 185 aa13.38□□□□□ -0.27
USP11-206ENST00000469080 GOLGA6L9A6NEM1 432 aa13.38□□□□□ -0.27
USP11-206ENST00000469080 KCNJ6P48051 423 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms