RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 PPP1R9AQ9ULJ8 1098 aa14.13□□□□□ -0.15
PDZRN3-205ENST00000466780 TTC7AQ9ULT0 858 aaPredicted RBP14.13□□□□□ -0.15
PDZRN3-205ENST00000466780 GFPT2O94808 682 aa14.13□□□□□ -0.15
PDZRN3-205ENST00000466780 COPB2P35606 906 aa14.13□□□□□ -0.15
PDZRN3-205ENST00000466780 TCERG1LQ5VWI1 586 aa14.13□□□□□ -0.15
PDZRN3-205ENST00000466780 ARMC9Q7Z3E5 817 aa14.13□□□□□ -0.15
PDZRN3-205ENST00000466780 CPLX4Q7Z7G2 160 aa14.13□□□□□ -0.15
PDZRN3-205ENST00000466780 RPAINQ86UA6 219 aa14.13□□□□□ -0.15
PDZRN3-205ENST00000466780 SLC30A5Q8TAD4 765 aa14.13□□□□□ -0.15
PDZRN3-205ENST00000466780 FMO2Q99518 471 aa14.13□□□□□ -0.15
PDZRN3-205ENST00000466780 REEP2Q9BRK0 252 aa14.13□□□□□ -0.15
PDZRN3-205ENST00000466780 ZDHHC18Q9NUE0 388 aa14.13□□□□□ -0.15
PDZRN3-205ENST00000466780 GCNT4Q9P109 453 aa14.13□□□□□ -0.15
PDZRN3-205ENST00000466780 IGSF9BQ9UPX0 1349 aa14.12□□□□□ -0.15
PDZRN3-205ENST00000466780 MEIS1O00470 390 aa14.12□□□□□ -0.15
PDZRN3-205ENST00000466780 OPLAHO14841 1288 aa14.12□□□□□ -0.15
PDZRN3-205ENST00000466780 PLCG2P16885 1265 aa14.12□□□□□ -0.15
PDZRN3-205ENST00000466780 GABPAQ06546 454 aa14.12□□□□□ -0.15
PDZRN3-205ENST00000466780 PABPC4Q13310 644 aaKnown RBP eCLIP14.12□□□□□ -0.15
PDZRN3-205ENST00000466780 XRCC4Q13426 336 aa14.12□□□□□ -0.15
PDZRN3-205ENST00000466780 GRAPQ13588 217 aa14.12□□□□□ -0.15
PDZRN3-205ENST00000466780 CATSPER3Q86XQ3 398 aa14.12□□□□□ -0.15
PDZRN3-205ENST00000466780 GRAPLQ8TC17 118 aaPredicted RBP14.12□□□□□ -0.15
PDZRN3-205ENST00000466780 HVCN1Q96D96 273 aa14.12□□□□□ -0.15
PDZRN3-205ENST00000466780 FAM129AQ9BZQ8 928 aa14.12□□□□□ -0.15
PDZRN3-205ENST00000466780 AMFRQ9UKV5 643 aa14.12□□□□□ -0.15
PDZRN3-205ENST00000466780 ASTN1O14525 1302 aa14.12□□□□□ -0.15
PDZRN3-205ENST00000466780 PDXKO00764 312 aa14.12□□□□□ -0.15
PDZRN3-205ENST00000466780 ZBTB5O15062 677 aa14.12□□□□□ -0.15
PDZRN3-205ENST00000466780 NR3C1P04150 777 aa14.12□□□□□ -0.15
PDZRN3-205ENST00000466780 PTENP60484 403 aa14.12□□□□□ -0.15
PDZRN3-205ENST00000466780 SPIRE1Q08AE8 756 aa14.12□□□□□ -0.15
PDZRN3-205ENST00000466780 IFFO1Q0D2I5 559 aa14.12□□□□□ -0.15
PDZRN3-205ENST00000466780 NEDD9Q14511 834 aa14.12□□□□□ -0.15
PDZRN3-205ENST00000466780 DUPD1Q68J44 220 aa14.12□□□□□ -0.15
PDZRN3-205ENST00000466780 CHMP6Q96FZ7 201 aa14.12□□□□□ -0.15
PDZRN3-205ENST00000466780 ZNF317Q96PQ6 595 aaPredicted RBP14.12□□□□□ -0.15
PDZRN3-205ENST00000466780 CNOT10Q9H9A5 744 aaKnown RBP14.12□□□□□ -0.15
PDZRN3-205ENST00000466780 ERVK-5Q9HDB9 667 aa14.12□□□□□ -0.15
PDZRN3-205ENST00000466780 SWAP70Q9UH65 585 aa14.12□□□□□ -0.15
PDZRN3-205ENST00000466780 RSPH10B2B2RC85 870 aa14.11□□□□□ -0.15
PDZRN3-205ENST00000466780 C21orf2O43822 256 aa14.11□□□□□ -0.15
PDZRN3-205ENST00000466780 RSPH10BP0C881 870 aa14.11□□□□□ -0.15
PDZRN3-205ENST00000466780 EIF3BP55884 814 aaKnown RBP14.11□□□□□ -0.15
PDZRN3-205ENST00000466780 PPATQ06203 517 aa14.11□□□□□ -0.15
PDZRN3-205ENST00000466780 KCNA1Q09470 495 aa14.11□□□□□ -0.15
PDZRN3-205ENST00000466780 C15orf52Q6ZUT6 534 aaKnown RBP14.11□□□□□ -0.15
PDZRN3-205ENST00000466780 ADAT2Q7Z6V5 191 aaKnown RBP14.11□□□□□ -0.15
PDZRN3-205ENST00000466780 VPS36Q86VN1 386 aa14.11□□□□□ -0.15
PDZRN3-205ENST00000466780 SLC35G2Q8TBE7 412 aa14.11□□□□□ -0.15
PDZRN3-205ENST00000466780 CENPTQ96BT3 561 aa14.11□□□□□ -0.15
PDZRN3-205ENST00000466780 FAM163AQ96GL9 167 aaPredicted RBP14.11□□□□□ -0.15
PDZRN3-205ENST00000466780 ADAM7Q9H2U9 754 aa14.11□□□□□ -0.15
PDZRN3-205ENST00000466780 KDM4CQ9H3R0 1056 aa14.11□□□□□ -0.15
PDZRN3-205ENST00000466780 GAKO14976 1311 aa14.11□□□□□ -0.15
PDZRN3-205ENST00000466780 FAM170AA1A519 330 aa14.11□□□□□ -0.15
PDZRN3-205ENST00000466780 CLIC2O15247 247 aa14.11□□□□□ -0.15
PDZRN3-205ENST00000466780 CALUO43852 315 aaPredicted RBP14.11□□□□□ -0.15
PDZRN3-205ENST00000466780 EVI5O60447 810 aa14.11□□□□□ -0.15
PDZRN3-205ENST00000466780 CTNND1O60716 968 aaKnown RBP14.11□□□□□ -0.15
PDZRN3-205ENST00000466780 SPATA31C1P0DKV0 1188 aa14.11□□□□□ -0.15
PDZRN3-205ENST00000466780 GPSM2P81274 684 aa14.11□□□□□ -0.15
PDZRN3-205ENST00000466780 SPDYCQ5MJ68 293 aa14.11□□□□□ -0.15
PDZRN3-205ENST00000466780 KCTD1Q719H9 257 aa14.11□□□□□ -0.15
PDZRN3-205ENST00000466780 GLYCTKQ8IVS8 523 aa14.11□□□□□ -0.15
PDZRN3-205ENST00000466780 GLG1Q92896 1179 aa14.11□□□□□ -0.15
PDZRN3-205ENST00000466780 NCANO14594 1321 aa14.11□□□□□ -0.15
PDZRN3-205ENST00000466780 ZNF831Q5JPB2 1677 aa14.1□□□□□ -0.15
PDZRN3-205ENST00000466780 SLC26A4O43511 780 aa14.1□□□□□ -0.15
PDZRN3-205ENST00000466780 DNAJC8O75937 253 aaPredicted RBP14.1□□□□□ -0.15
PDZRN3-205ENST00000466780 TTLL1O95922 423 aa14.1□□□□□ -0.15
PDZRN3-205ENST00000466780 GHRP10912 638 aa14.1□□□□□ -0.15
PDZRN3-205ENST00000466780 CHN1P15882 459 aa14.1□□□□□ -0.15
PDZRN3-205ENST00000466780 FERP16591 822 aa14.1□□□□□ -0.15
PDZRN3-205ENST00000466780 IBSPP21815 317 aaPredicted RBP14.1□□□□□ -0.15
PDZRN3-205ENST00000466780 KLRC3Q07444 240 aa14.1□□□□□ -0.15
PDZRN3-205ENST00000466780 PICALMQ13492 652 aa14.1□□□□□ -0.15
PDZRN3-205ENST00000466780 SYT2Q8N9I0 419 aaPredicted RBP14.1□□□□□ -0.15
PDZRN3-205ENST00000466780 RNF25Q96BH1 459 aaPredicted RBP14.1□□□□□ -0.15
PDZRN3-205ENST00000466780 MBOAT7Q96N66 472 aa14.1□□□□□ -0.15
PDZRN3-205ENST00000466780 ERP44Q9BS26 406 aa14.1□□□□□ -0.15
PDZRN3-205ENST00000466780 TACO1Q9BSH4 297 aaKnown RBP14.1□□□□□ -0.15
PDZRN3-205ENST00000466780 RAB17Q9H0T7 212 aa14.1□□□□□ -0.15
PDZRN3-205ENST00000466780 IKZF4Q9H2S9 585 aa14.1□□□□□ -0.15
PDZRN3-205ENST00000466780 TYW1Q9NV66 732 aaKnown RBP14.1□□□□□ -0.15
PDZRN3-205ENST00000466780 CYP3A7-CYP3A51PA0A087WV96 503 aa14.1□□□□□ -0.15
PDZRN3-205ENST00000466780 SPDYE3A6NKU9 549 aa14.1□□□□□ -0.15
PDZRN3-205ENST00000466780 PPIP5K2O43314 1243 aa14.1□□□□□ -0.15
PDZRN3-205ENST00000466780 NUDT17P0C025 328 aa14.1□□□□□ -0.15
PDZRN3-205ENST00000466780 CYP3A7P24462 503 aa14.1□□□□□ -0.15
PDZRN3-205ENST00000466780 DR1Q01658 176 aa14.1□□□□□ -0.15
PDZRN3-205ENST00000466780 PLS1Q14651 629 aa14.1□□□□□ -0.15
PDZRN3-205ENST00000466780 VPS72Q15906 364 aa14.1□□□□□ -0.15
PDZRN3-205ENST00000466780 MFSD14BQ5SR56 506 aa14.1□□□□□ -0.15
PDZRN3-205ENST00000466780 TRAPPC3LQ5T215 181 aa14.1□□□□□ -0.15
PDZRN3-205ENST00000466780 UBAP2Q5T6F2 1119 aaKnown RBP14.1□□□□□ -0.15
PDZRN3-205ENST00000466780 ZDHHC24Q6UX98 284 aa14.1□□□□□ -0.15
PDZRN3-205ENST00000466780 CEP57Q86XR8 500 aa14.1□□□□□ -0.15
PDZRN3-205ENST00000466780 CNBD1Q8NA66 436 aa14.1□□□□□ -0.15
PDZRN3-205ENST00000466780 MAGEC3Q8TD91 643 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 312.1 ms