RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 U3KPZ7 1027 aaPredicted RBP19.65■□□□□ 0.74
UBE2D4-209ENST00000454428 hCG_1642624A0A1W2PR95 340 aa19.64■□□□□ 0.73
UBE2D4-209ENST00000454428 C2orf71A6NGG8 1288 aa19.64■□□□□ 0.73
UBE2D4-209ENST00000454428 GPR182O15218 404 aa19.64■□□□□ 0.73
UBE2D4-209ENST00000454428 CLASP2O75122 1294 aaKnown RBP19.64■□□□□ 0.73
UBE2D4-209ENST00000454428 DDAH1O94760 285 aa19.64■□□□□ 0.73
UBE2D4-209ENST00000454428 CCNE2O96020 404 aa19.64■□□□□ 0.73
UBE2D4-209ENST00000454428 IGHDP01880 384 aa19.64■□□□□ 0.73
UBE2D4-209ENST00000454428 CLCN5P51795 746 aa19.64■□□□□ 0.73
UBE2D4-209ENST00000454428 ITIH3Q06033 890 aa19.64■□□□□ 0.73
UBE2D4-209ENST00000454428 SART3Q15020 963 aaKnown RBP19.64■□□□□ 0.73
UBE2D4-209ENST00000454428 KIZQ2M2Z5 673 aa19.64■□□□□ 0.73
UBE2D4-209ENST00000454428 TPRNQ4KMQ1 711 aa19.64■□□□□ 0.73
UBE2D4-209ENST00000454428 KANK3Q6NY19 840 aa19.64■□□□□ 0.73
UBE2D4-209ENST00000454428 ZDHHC14Q8IZN3 488 aa19.64■□□□□ 0.73
UBE2D4-209ENST00000454428 MRPL43Q8N983 215 aaKnown RBP19.64■□□□□ 0.73
UBE2D4-209ENST00000454428 NCOA7Q8NI08 942 aa19.64■□□□□ 0.73
UBE2D4-209ENST00000454428 CTCFLQ8NI51 663 aaPredicted RBP19.64■□□□□ 0.73
UBE2D4-209ENST00000454428 PPP1R16BQ96T49 567 aa19.64■□□□□ 0.73
UBE2D4-209ENST00000454428 OSMRQ99650 979 aa19.64■□□□□ 0.73
UBE2D4-209ENST00000454428 RNF216Q9NWF9 866 aaPredicted RBP19.64■□□□□ 0.73
UBE2D4-209ENST00000454428 LIMD1Q9UGP4 676 aa19.64■□□□□ 0.73
UBE2D4-209ENST00000454428 SPDYE3A6NKU9 549 aa19.63■□□□□ 0.73
UBE2D4-209ENST00000454428 GPR32O75388 356 aa19.63■□□□□ 0.73
UBE2D4-209ENST00000454428 NPR3P17342 541 aa19.63■□□□□ 0.73
UBE2D4-209ENST00000454428 ATP4AP20648 1035 aa19.63■□□□□ 0.73
UBE2D4-209ENST00000454428 COL9A3Q14050 684 aaPredicted RBP19.63■□□□□ 0.73
UBE2D4-209ENST00000454428 ABHD15Q6UXT9 468 aa19.63■□□□□ 0.73
UBE2D4-209ENST00000454428 TMC7Q7Z402 723 aa19.63■□□□□ 0.73
UBE2D4-209ENST00000454428 RALYLQ86SE5 291 aaKnown RBP19.63■□□□□ 0.73
UBE2D4-209ENST00000454428 C12orf76Q8N812 135 aaPredicted RBP19.63■□□□□ 0.73
UBE2D4-209ENST00000454428 ZNF558Q96NG5 402 aa19.63■□□□□ 0.73
UBE2D4-209ENST00000454428 AGO4Q9HCK5 861 aaKnown RBP19.63■□□□□ 0.73
UBE2D4-209ENST00000454428 PI15O43692 258 aa19.62■□□□□ 0.73
UBE2D4-209ENST00000454428 HBP1O60381 514 aa19.62■□□□□ 0.73
UBE2D4-209ENST00000454428 SLC26A2P50443 739 aa19.62■□□□□ 0.73
UBE2D4-209ENST00000454428 CRYBB1P53674 252 aaPredicted RBP19.62■□□□□ 0.73
UBE2D4-209ENST00000454428 MCTP2Q6DN12 878 aa19.62■□□□□ 0.73
UBE2D4-209ENST00000454428 CES5AQ6NT32 575 aa19.62■□□□□ 0.73
UBE2D4-209ENST00000454428 CCDC60Q8IWA6 550 aaPredicted RBP19.62■□□□□ 0.73
UBE2D4-209ENST00000454428 SLC39A11Q8N1S5 342 aa19.62■□□□□ 0.73
UBE2D4-209ENST00000454428 LZTS2Q9BRK4 669 aa19.62■□□□□ 0.73
UBE2D4-209ENST00000454428 SDF4Q9BRK5 362 aa19.62■□□□□ 0.73
UBE2D4-209ENST00000454428 SPG21Q9NZD8 308 aa19.62■□□□□ 0.73
UBE2D4-209ENST00000454428 COL1A2P08123 1366 aa19.61■□□□□ 0.73
UBE2D4-209ENST00000454428 C22orf31O95567 290 aa19.61■□□□□ 0.73
UBE2D4-209ENST00000454428 RXRAP19793 462 aa19.61■□□□□ 0.73
UBE2D4-209ENST00000454428 KIF5BP33176 963 aa19.61■□□□□ 0.73
UBE2D4-209ENST00000454428 PPM1AP35813 382 aa19.61■□□□□ 0.73
UBE2D4-209ENST00000454428 MTHFRP42898 656 aa19.61■□□□□ 0.73
UBE2D4-209ENST00000454428 SMC1AQ14683 1233 aaKnown RBP19.61■□□□□ 0.73
UBE2D4-209ENST00000454428 CLLU1OSQ5K130 101 aa19.61■□□□□ 0.73
UBE2D4-209ENST00000454428 ODR4Q5SWX8 454 aa19.61■□□□□ 0.73
UBE2D4-209ENST00000454428 RARS2Q5T160 578 aaKnown RBP19.61■□□□□ 0.73
UBE2D4-209ENST00000454428 LRRC43Q8N309 656 aa19.61■□□□□ 0.73
UBE2D4-209ENST00000454428 PGBD1Q96JS3 809 aa19.61■□□□□ 0.73
UBE2D4-209ENST00000454428 VTNP04004 478 aa19.6■□□□□ 0.73
UBE2D4-209ENST00000454428 GSPT1P15170 499 aaKnown RBP19.6■□□□□ 0.73
UBE2D4-209ENST00000454428 KRT17Q04695 432 aa19.6■□□□□ 0.73
UBE2D4-209ENST00000454428 KIAA1841Q6NSI8 718 aa19.6■□□□□ 0.73
UBE2D4-209ENST00000454428 TDRD5Q8NAT2 981 aaKnown RBP19.6■□□□□ 0.73
UBE2D4-209ENST00000454428 ZFHX4Q86UP3 3567 aa19.6■□□□□ 0.73
UBE2D4-209ENST00000454428 MEIS1O00470 390 aa19.59■□□□□ 0.73
UBE2D4-209ENST00000454428 AOC1P19801 751 aa19.59■□□□□ 0.73
UBE2D4-209ENST00000454428 CEP55Q53EZ4 464 aa19.59■□□□□ 0.73
UBE2D4-209ENST00000454428 ZNF484Q5JVG2 852 aa19.59■□□□□ 0.73
UBE2D4-209ENST00000454428 TYW1BQ6NUM6 668 aa19.59■□□□□ 0.73
UBE2D4-209ENST00000454428 ECHDC2Q86YB7 292 aa19.59■□□□□ 0.73
UBE2D4-209ENST00000454428 CCDC105Q8IYK2 499 aa19.59■□□□□ 0.73
UBE2D4-209ENST00000454428 FLCNQ8NFG4 579 aa19.59■□□□□ 0.73
UBE2D4-209ENST00000454428 MFSD1Q9H3U5 465 aa19.59■□□□□ 0.73
UBE2D4-209ENST00000454428 USTQ9Y2C2 406 aa19.59■□□□□ 0.73
UBE2D4-209ENST00000454428 NCOR2Q9Y618 2525 aa19.58■□□□□ 0.73
UBE2D4-209ENST00000454428 DDX39AO00148 427 aaKnown RBP19.58■□□□□ 0.72
UBE2D4-209ENST00000454428 DHX15O43143 795 aaKnown RBP19.58■□□□□ 0.72
UBE2D4-209ENST00000454428 HOXA2O43364 376 aa19.58■□□□□ 0.72
UBE2D4-209ENST00000454428 EOMESO95936 686 aa19.58■□□□□ 0.72
UBE2D4-209ENST00000454428 EPCAMP16422 314 aa19.58■□□□□ 0.72
UBE2D4-209ENST00000454428 GNAQP50148 359 aa19.58■□□□□ 0.72
UBE2D4-209ENST00000454428 RAB11FIP4Q86YS3 637 aa19.58■□□□□ 0.72
UBE2D4-209ENST00000454428 AUTS2Q8WXX7 1259 aa19.58■□□□□ 0.72
UBE2D4-209ENST00000454428 RWDD1Q9H446 243 aaPredicted RBP19.58■□□□□ 0.72
UBE2D4-209ENST00000454428 MYH9P35579 1960 aaKnown RBP19.57■□□□□ 0.72
UBE2D4-209ENST00000454428 C2orf16Q68DN1 1984 aa19.57■□□□□ 0.72
UBE2D4-209ENST00000454428 MED19A0JLT2 244 aaPredicted RBP19.57■□□□□ 0.72
UBE2D4-209ENST00000454428 NT5C1B-RDH14C9J2C7 533 aa19.57■□□□□ 0.72
UBE2D4-209ENST00000454428 SH2B2O14492 632 aaPredicted RBP19.57■□□□□ 0.72
UBE2D4-209ENST00000454428 BACH1O14867 736 aa19.57■□□□□ 0.72
UBE2D4-209ENST00000454428 ANGPT1Q15389 498 aa19.57■□□□□ 0.72
UBE2D4-209ENST00000454428 FAM160B1Q5W0V3 765 aa19.57■□□□□ 0.72
UBE2D4-209ENST00000454428 HEATR3Q7Z4Q2 680 aa19.57■□□□□ 0.72
UBE2D4-209ENST00000454428 ZNF598Q86UK7 904 aaKnown RBP19.57■□□□□ 0.72
UBE2D4-209ENST00000454428 TMEM173Q86WV6 379 aaPredicted RBP19.57■□□□□ 0.72
UBE2D4-209ENST00000454428 CCDC82Q8N4S0 544 aa19.57■□□□□ 0.72
UBE2D4-209ENST00000454428 SLC22A17Q8WUG5 538 aa19.57■□□□□ 0.72
UBE2D4-209ENST00000454428 ZBP1Q9H171 429 aa19.57■□□□□ 0.72
UBE2D4-209ENST00000454428 ADAMTS10Q9H324 1103 aa19.57■□□□□ 0.72
UBE2D4-209ENST00000454428 ZNF302Q9NR11 478 aa19.57■□□□□ 0.72
UBE2D4-209ENST00000454428 DBR1Q9UK59 544 aaKnown RBP19.57■□□□□ 0.72
UBE2D4-209ENST00000454428 WDR81Q562E7 1941 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms