RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 ABHD17CQ6PCB6 329 aa6.56□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 ELMSAN1Q6PJG2 1045 aa6.56□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 USP53Q70EK8 1073 aa6.56□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 CHST15Q7LFX5 561 aaPredicted RBP6.56□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 OTOP3Q7RTS5 596 aa6.56□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 RSAD2Q8WXG1 361 aa6.56□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 CEP95Q96GE4 821 aa6.56□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 FAM81BQ96LP2 452 aa6.56□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 MOGAT1Q96PD6 335 aa6.56□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 SMG9Q9H0W8 520 aaKnown RBP6.56□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 IRAK4Q9NWZ3 460 aa6.56□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 TJP2Q9UDY2 1190 aa6.56□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 RNF17Q9BXT8 1623 aaKnown RBP6.56□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 VWDEQ8N2E2 1590 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 C2orf81A6NN90 581 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 AP1G1O43747 822 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 ZNF862O60290 1169 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 SKAP2O75563 359 aaPredicted RBP6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 BAG2O95816 211 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 SNRPB2P08579 225 aaKnown RBP6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 RHCEP18577 417 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 MAOBP27338 520 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 HOXC12P31275 282 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 ARL4DP49703 201 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 KPNA1P52294 538 aaPredicted RBP6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 USP14P54578 494 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 RHDQ02161 417 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 FILIP1LQ4L180 1135 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 MTDHQ86UE4 582 aaKnown RBP6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 C7orf61Q8IZ16 206 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 MYOCDQ8IZQ8 938 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 PDCL2Q8N4E4 241 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 NAXEQ8NCW5 288 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 MSANTD4Q8NCY6 345 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 POF1BQ8WVV4 589 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 BRF1Q92994 677 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 ABHD17AQ96GS6 310 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 NEK1Q96PY6 1258 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 NUDT16L1Q9BRJ7 211 aaKnown RBP6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 DNAI2Q9GZS0 605 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 PARD3Q8TEW0 1356 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 MADDQ8WXG6 1647 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 DISP3Q9P2K9 1392 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 SOS2Q07890 1332 aaPredicted RBP6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 RASA4O43374 803 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 MMEP08473 750 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 MTHFD1P11586 935 aaKnown RBP6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 ITGA4P13612 1032 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 CAPN3P20807 821 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 CDC25BP30305 580 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 RBM5P52756 815 aaKnown RBP eCLIP6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 RRP12Q5JTH9 1297 aaKnown RBP6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 LRCH2Q5VUJ6 765 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 SLC6A19Q695T7 634 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 GTF2IRD2BQ6EKJ0 949 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 STYK1Q6J9G0 422 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 SDCCAG8Q86SQ7 713 aaPredicted RBP6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 GTF2IRD2Q86UP8 949 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 DZIP1Q86YF9 867 aaKnown RBP6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 ARHGEF39Q8N4T4 335 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 IGSF22Q8N9C0 903 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 TMEM145Q8NBT3 493 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 CLRN3Q8NCR9 226 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 IL17REQ8NFR9 667 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 BRSK1Q8TDC3 778 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 WDR89Q96FK6 387 aaPredicted RBP6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 UPF2Q9HAU5 1272 aaKnown RBP6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 ALG13Q9NP73 1137 aaKnown RBP6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 CYP26B1Q9NR63 512 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 ATP8A2Q9NTI2 1148 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 NDFIP2Q9NV92 336 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 TOR4AQ9NXH8 423 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 DONSONQ9NYP3 566 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 ARHGAP28Q9P2N2 729 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 HERC5Q9UII4 1024 aaKnown RBP6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 HIF3AQ9Y2N7 669 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 PTPN22Q9Y2R2 807 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 PCDHA8Q9Y5H6 950 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 DDX49Q9Y6V7 483 aaKnown RBP6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 ZNF518AQ6AHZ1 1483 aa6.55□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 CLTCL1P53675 1640 aa6.54□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 LRPPRCP42704 1394 aaKnown RBP6.54□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 RAD50Q92878 1312 aa6.54□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 H7C1W4 665 aa6.54□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 KRT13P13646 458 aa6.54□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 ZKSCAN1P17029 563 aaPredicted RBP6.54□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 PDE6CP51160 858 aa6.54□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 HTRA3P83110 453 aa6.54□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 SCARF1Q14162 830 aa6.54□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 GDF6Q6KF10 455 aaPredicted RBP6.54□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 TMCO3Q6UWJ1 677 aa6.54□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 ZC3H7AQ8IWR0 971 aaKnown RBP6.54□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 MRPL41Q8IXM3 137 aaKnown RBP6.54□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 TEX11Q8IYF3 940 aa6.54□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 CEP57L1Q8IYX8 460 aa6.54□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 LSMEM1Q8N8F7 131 aa6.54□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 CHTF18Q8WVB6 975 aa6.54□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 ANKRD49Q8WVL7 239 aa6.54□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 MAML1Q92585 1016 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms