RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 SPOUT1Q5T280 376 aaKnown RBP20.8■□□□□ 0.92
AC004540.1-201ENST00000439120 PTCRAQ6ISU1 281 aaPredicted RBP20.8■□□□□ 0.92
AC004540.1-201ENST00000439120 SLC24A5Q71RS6 500 aa20.8■□□□□ 0.92
AC004540.1-201ENST00000439120 CRIPAKQ8N1N5 446 aa20.8■□□□□ 0.92
AC004540.1-201ENST00000439120 RDM1Q8NG50 284 aa20.8■□□□□ 0.92
AC004540.1-201ENST00000439120 GJA10Q969M2 543 aa20.8■□□□□ 0.92
AC004540.1-201ENST00000439120 PABPC5Q96DU9 382 aaKnown RBP20.8■□□□□ 0.92
AC004540.1-201ENST00000439120 CLDND1Q9NY35 253 aa20.8■□□□□ 0.92
AC004540.1-201ENST00000439120 KIAA1671Q9BY89 1806 aa20.79■□□□□ 0.92
AC004540.1-201ENST00000439120 CYP3A7-CYP3A51PA0A087WV96 503 aa20.79■□□□□ 0.92
AC004540.1-201ENST00000439120 CCDC194A0A1B0GVG4 234 aa20.79■□□□□ 0.92
AC004540.1-201ENST00000439120 H3BQ06 376 aaPredicted RBP20.79■□□□□ 0.92
AC004540.1-201ENST00000439120 EDIL3O43854 480 aa20.79■□□□□ 0.92
AC004540.1-201ENST00000439120 ZNF862O60290 1169 aa20.79■□□□□ 0.92
AC004540.1-201ENST00000439120 MGEA5O60502 916 aa20.79■□□□□ 0.92
AC004540.1-201ENST00000439120 GPR32O75388 356 aa20.79■□□□□ 0.92
AC004540.1-201ENST00000439120 CYP3A7P24462 503 aa20.79■□□□□ 0.92
AC004540.1-201ENST00000439120 NLRP11P59045 1033 aaKnown RBP20.79■□□□□ 0.92
AC004540.1-201ENST00000439120 SCRN1Q12765 414 aa20.79■□□□□ 0.92
AC004540.1-201ENST00000439120 ANKRD1Q15327 319 aa20.79■□□□□ 0.92
AC004540.1-201ENST00000439120 NAALADL2Q58DX5 795 aa20.79■□□□□ 0.92
AC004540.1-201ENST00000439120 FAM228AQ86W67 206 aa20.79■□□□□ 0.92
AC004540.1-201ENST00000439120 ZNF710Q8N1W2 664 aa20.79■□□□□ 0.92
AC004540.1-201ENST00000439120 LRRC71Q8N4P6 559 aa20.79■□□□□ 0.92
AC004540.1-201ENST00000439120 P2RX5Q93086 422 aa20.79■□□□□ 0.92
AC004540.1-201ENST00000439120 PPP2R3CQ969Q6 453 aa20.79■□□□□ 0.92
AC004540.1-201ENST00000439120 ALG13Q9NP73 1137 aaKnown RBP20.79■□□□□ 0.92
AC004540.1-201ENST00000439120 RGS18Q9NS28 235 aa20.79■□□□□ 0.92
AC004540.1-201ENST00000439120 SEPT9Q9UHD8 586 aaPredicted RBP20.79■□□□□ 0.92
AC004540.1-201ENST00000439120 DDX25Q9UHL0 483 aaKnown RBP20.79■□□□□ 0.92
AC004540.1-201ENST00000439120 KCNJ14Q9UNX9 436 aa20.79■□□□□ 0.92
AC004540.1-201ENST00000439120 FAM50BQ9Y247 325 aa20.79■□□□□ 0.92
AC004540.1-201ENST00000439120 PSMD10O75832 226 aa20.78■□□□□ 0.92
AC004540.1-201ENST00000439120 MMP1P03956 469 aa20.78■□□□□ 0.92
AC004540.1-201ENST00000439120 GATMP50440 423 aa20.78■□□□□ 0.92
AC004540.1-201ENST00000439120 UGCGQ16739 394 aa20.78■□□□□ 0.92
AC004540.1-201ENST00000439120 INF2Q27J81 1249 aa20.78■□□□□ 0.92
AC004540.1-201ENST00000439120 LETM2Q2VYF4 491 aa20.78■□□□□ 0.92
AC004540.1-201ENST00000439120 MOXD1Q6UVY6 613 aa20.78■□□□□ 0.92
AC004540.1-201ENST00000439120 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.78■□□□□ 0.92
AC004540.1-201ENST00000439120 C1QTNF1Q9BXJ1 281 aa20.78■□□□□ 0.92
AC004540.1-201ENST00000439120 PLAGL2Q9UPG8 496 aa20.78■□□□□ 0.92
AC004540.1-201ENST00000439120 STK36Q9NRP7 1315 aa20.78■□□□□ 0.92
AC004540.1-201ENST00000439120 TBKBP1A7MCY6 615 aa20.77■□□□□ 0.92
AC004540.1-201ENST00000439120 M0R2N6 131 aa20.77■□□□□ 0.92
AC004540.1-201ENST00000439120 ANAPC15P60006 121 aa20.77■□□□□ 0.92
AC004540.1-201ENST00000439120 NEK9Q8TD19 979 aa20.77■□□□□ 0.92
AC004540.1-201ENST00000439120 ATP6V0A4Q9HBG4 840 aa20.77■□□□□ 0.92
AC004540.1-201ENST00000439120 AAASQ9NRG9 546 aa20.77■□□□□ 0.92
AC004540.1-201ENST00000439120 PCDHB12Q9Y5F1 795 aa20.77■□□□□ 0.92
AC004540.1-201ENST00000439120 BRWD1Q9NSI6 2320 aa20.77■□□□□ 0.92
AC004540.1-201ENST00000439120 ATG2AQ2TAZ0 1938 aa20.76■□□□□ 0.91
AC004540.1-201ENST00000439120 NCOR1O75376 2440 aa20.76■□□□□ 0.91
AC004540.1-201ENST00000439120 C9IYK1 514 aa20.76■□□□□ 0.91
AC004540.1-201ENST00000439120 PFKFB2O60825 505 aa20.76■□□□□ 0.91
AC004540.1-201ENST00000439120 EIF5BO60841 1220 aaKnown RBP20.76■□□□□ 0.91
AC004540.1-201ENST00000439120 ZSCAN20P17040 1043 aaPredicted RBP20.76■□□□□ 0.91
AC004540.1-201ENST00000439120 NPY5RQ15761 445 aa20.76■□□□□ 0.91
AC004540.1-201ENST00000439120 MTERF2Q49AM1 385 aa20.76■□□□□ 0.91
AC004540.1-201ENST00000439120 XKR3Q5GH77 459 aa20.76■□□□□ 0.91
AC004540.1-201ENST00000439120 ERICH6BQ5W0A0 696 aa20.76■□□□□ 0.91
AC004540.1-201ENST00000439120 KLHL23Q8NBE8 558 aa20.76■□□□□ 0.91
AC004540.1-201ENST00000439120 NLRP7Q8WX94 980 aa20.76■□□□□ 0.91
AC004540.1-201ENST00000439120 WASF1Q92558 559 aa20.76■□□□□ 0.91
AC004540.1-201ENST00000439120 PHF20Q9BVI0 1012 aa20.76■□□□□ 0.91
AC004540.1-201ENST00000439120 IGFLR1Q9H665 355 aa20.76■□□□□ 0.91
AC004540.1-201ENST00000439120 TMEM161AQ9NX61 479 aa20.76■□□□□ 0.91
AC004540.1-201ENST00000439120 TPCN1Q9ULQ1 816 aa20.76■□□□□ 0.91
AC004540.1-201ENST00000439120 GRXCR2A6NFK2 248 aa20.75■□□□□ 0.91
AC004540.1-201ENST00000439120 MARCH6O60337 910 aa20.75■□□□□ 0.91
AC004540.1-201ENST00000439120 ITGB1P05556 798 aa20.75■□□□□ 0.91
AC004540.1-201ENST00000439120 IL9P15248 144 aa20.75■□□□□ 0.91
AC004540.1-201ENST00000439120 EIF4BP23588 611 aaKnown RBP20.75■□□□□ 0.91
AC004540.1-201ENST00000439120 SSTR3P32745 418 aaPredicted RBP20.75■□□□□ 0.91
AC004540.1-201ENST00000439120 DNM2P50570 870 aa20.75■□□□□ 0.91
AC004540.1-201ENST00000439120 NEK8Q86SG6 692 aa20.75■□□□□ 0.91
AC004540.1-201ENST00000439120 LINC01465Q8N7H1 131 aa20.75■□□□□ 0.91
AC004540.1-201ENST00000439120 ETNPPLQ8TBG4 499 aa20.75■□□□□ 0.91
AC004540.1-201ENST00000439120 ZNF668Q96K58 619 aaPredicted RBP20.75■□□□□ 0.91
AC004540.1-201ENST00000439120 MBOAT7Q96N66 472 aa20.75■□□□□ 0.91
AC004540.1-201ENST00000439120 FNDC1Q4ZHG4 1894 aaPredicted RBP20.75■□□□□ 0.91
AC004540.1-201ENST00000439120 BDP1A6H8Y1 2624 aa20.74■□□□□ 0.91
AC004540.1-201ENST00000439120 DDX11L8A8MPP1 907 aa20.74■□□□□ 0.91
AC004540.1-201ENST00000439120 HOXA2O43364 376 aa20.74■□□□□ 0.91
AC004540.1-201ENST00000439120 GCFC2P16383 781 aaKnown RBP20.74■□□□□ 0.91
AC004540.1-201ENST00000439120 GPC3P51654 580 aa20.74■□□□□ 0.91
AC004540.1-201ENST00000439120 HYAL1Q12794 435 aa20.74■□□□□ 0.91
AC004540.1-201ENST00000439120 FAM102BQ5T8I3 360 aa20.74■□□□□ 0.91
AC004540.1-201ENST00000439120 FAM178BQ8IXR5 827 aa20.74■□□□□ 0.91
AC004540.1-201ENST00000439120 ABI1Q8IZP0 508 aa20.74■□□□□ 0.91
AC004540.1-201ENST00000439120 SPPL3Q8TCT6 385 aa20.74■□□□□ 0.91
AC004540.1-201ENST00000439120 POF1BQ8WVV4 589 aa20.74■□□□□ 0.91
AC004540.1-201ENST00000439120 NAP1L4Q99733 375 aaKnown RBP20.74■□□□□ 0.91
AC004540.1-201ENST00000439120 ADAMTS10Q9H324 1103 aa20.74■□□□□ 0.91
AC004540.1-201ENST00000439120 ELAC1Q9H777 363 aaKnown RBP20.74■□□□□ 0.91
AC004540.1-201ENST00000439120 BRMS1Q9HCU9 246 aa20.74■□□□□ 0.91
AC004540.1-201ENST00000439120 ORC3Q9UBD5 711 aaPredicted RBP20.74■□□□□ 0.91
AC004540.1-201ENST00000439120 SLC37A4O43826 429 aa20.73■□□□□ 0.91
AC004540.1-201ENST00000439120 CCNT1O60563 726 aaKnown RBP20.73■□□□□ 0.91
AC004540.1-201ENST00000439120 FGFR1P11362 822 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms