RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 GPR39O43194 453 aa5.1□□□□□ -1.59
TRAPPC13-204ENST00000438419 CYP1A1P04798 512 aaPredicted RBP5.1□□□□□ -1.59
TRAPPC13-204ENST00000438419 SESN3P58005 492 aa5.1□□□□□ -1.59
TRAPPC13-204ENST00000438419 AMPD3Q01432 767 aa5.1□□□□□ -1.59
TRAPPC13-204ENST00000438419 ALDH6A1Q02252 535 aaKnown RBP5.1□□□□□ -1.59
TRAPPC13-204ENST00000438419 ROM1Q03395 351 aa5.1□□□□□ -1.59
TRAPPC13-204ENST00000438419 NFATC3Q12968 1075 aa5.1□□□□□ -1.59
TRAPPC13-204ENST00000438419 DDB1Q16531 1140 aa5.1□□□□□ -1.59
TRAPPC13-204ENST00000438419 TTC38Q5R3I4 469 aa5.1□□□□□ -1.59
TRAPPC13-204ENST00000438419 RNF219Q5W0B1 726 aaPredicted RBP5.1□□□□□ -1.59
TRAPPC13-204ENST00000438419 KANK2Q63ZY3 851 aa5.1□□□□□ -1.59
TRAPPC13-204ENST00000438419 Q6ZUG5 572 aa5.1□□□□□ -1.59
TRAPPC13-204ENST00000438419 CXXC5Q7LFL8 322 aaKnown RBP5.1□□□□□ -1.59
TRAPPC13-204ENST00000438419 FERMT3Q86UX7 667 aa5.1□□□□□ -1.59
TRAPPC13-204ENST00000438419 SPATS2Q86XZ4 545 aaKnown RBP5.1□□□□□ -1.59
TRAPPC13-204ENST00000438419 C7orf31Q8N865 590 aa5.1□□□□□ -1.59
TRAPPC13-204ENST00000438419 ZNF610Q8N9Z0 462 aa5.1□□□□□ -1.59
TRAPPC13-204ENST00000438419 WDR66Q8TBY9 1149 aa5.1□□□□□ -1.59
TRAPPC13-204ENST00000438419 PUS7Q96PZ0 661 aaKnown RBP5.1□□□□□ -1.59
TRAPPC13-204ENST00000438419 BTBD2Q9BX70 525 aa5.1□□□□□ -1.59
TRAPPC13-204ENST00000438419 USP40Q9NVE5 1235 aa5.1□□□□□ -1.59
TRAPPC13-204ENST00000438419 RTEL1Q9NZ71 1219 aa5.1□□□□□ -1.59
TRAPPC13-204ENST00000438419 USP36Q9P275 1121 aaKnown RBP5.1□□□□□ -1.59
TRAPPC13-204ENST00000438419 NOP58Q9Y2X3 529 aaKnown RBP5.1□□□□□ -1.59
TRAPPC13-204ENST00000438419 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.09□□□□□ -1.59
TRAPPC13-204ENST00000438419 B4GALT3O60512 393 aa5.09□□□□□ -1.59
TRAPPC13-204ENST00000438419 PRLP01236 227 aa5.09□□□□□ -1.59
TRAPPC13-204ENST00000438419 ID4P47928 161 aa5.09□□□□□ -1.59
TRAPPC13-204ENST00000438419 CD83Q01151 205 aa5.09□□□□□ -1.59
TRAPPC13-204ENST00000438419 KIAA2012Q0VF49 1180 aa5.09□□□□□ -1.59
TRAPPC13-204ENST00000438419 FAPQ12884 760 aa5.09□□□□□ -1.59
TRAPPC13-204ENST00000438419 TERF2Q15554 542 aa5.09□□□□□ -1.59
TRAPPC13-204ENST00000438419 ZFYVE27Q5T4F4 411 aa5.09□□□□□ -1.59
TRAPPC13-204ENST00000438419 TIGD7Q6NT04 549 aaPredicted RBP5.09□□□□□ -1.59
TRAPPC13-204ENST00000438419 DDX42Q86XP3 938 aaKnown RBP eCLIP5.09□□□□□ -1.59
TRAPPC13-204ENST00000438419 PHYKPLQ8IUZ5 450 aa5.09□□□□□ -1.59
TRAPPC13-204ENST00000438419 KLHL36Q8N4N3 616 aa5.09□□□□□ -1.59
TRAPPC13-204ENST00000438419 AJUBAQ96IF1 538 aa5.09□□□□□ -1.59
TRAPPC13-204ENST00000438419 TEPSINQ96N21 525 aa5.09□□□□□ -1.59
TRAPPC13-204ENST00000438419 FAM126AQ9BYI3 521 aaPredicted RBP5.09□□□□□ -1.59
TRAPPC13-204ENST00000438419 KATNBL1Q9H079 304 aa5.09□□□□□ -1.59
TRAPPC13-204ENST00000438419 OR10A5Q9H207 317 aa5.09□□□□□ -1.59
TRAPPC13-204ENST00000438419 TMPRSS5Q9H3S3 457 aa5.09□□□□□ -1.59
TRAPPC13-204ENST00000438419 ADAM29Q9UKF5 820 aa5.09□□□□□ -1.59
TRAPPC13-204ENST00000438419 hCG_2014768A0A024R1R8 64 aa5.08□□□□□ -1.6
TRAPPC13-204ENST00000438419 PPM1GO15355 546 aaPredicted RBP5.08□□□□□ -1.6
TRAPPC13-204ENST00000438419 RAB11FIP3O75154 756 aa5.08□□□□□ -1.6
TRAPPC13-204ENST00000438419 MAFO75444 373 aaPredicted RBP5.08□□□□□ -1.6
TRAPPC13-204ENST00000438419 POLD1P28340 1107 aa5.08□□□□□ -1.6
TRAPPC13-204ENST00000438419 CSF2RBP32927 897 aa5.08□□□□□ -1.6
TRAPPC13-204ENST00000438419 CNR2P34972 360 aa5.08□□□□□ -1.6
TRAPPC13-204ENST00000438419 TMPRSS15P98073 1019 aa5.08□□□□□ -1.6
TRAPPC13-204ENST00000438419 TOP3AQ13472 1001 aaPredicted RBP5.08□□□□□ -1.6
TRAPPC13-204ENST00000438419 BROXQ5VW32 411 aa5.08□□□□□ -1.6
TRAPPC13-204ENST00000438419 SLFN12LQ6IEE8 588 aa5.08□□□□□ -1.6
TRAPPC13-204ENST00000438419 HDGFL2Q7Z4V5 671 aaPredicted RBP5.08□□□□□ -1.6
TRAPPC13-204ENST00000438419 NECAB2Q7Z6G3 386 aa5.08□□□□□ -1.6
TRAPPC13-204ENST00000438419 GPATCH3Q96I76 525 aa5.08□□□□□ -1.6
TRAPPC13-204ENST00000438419 MAML3Q96JK9 1138 aa5.08□□□□□ -1.6
TRAPPC13-204ENST00000438419 TUBGCP5Q96RT8 1024 aa5.08□□□□□ -1.6
TRAPPC13-204ENST00000438419 FBXO10Q9UK96 956 aa5.08□□□□□ -1.6
TRAPPC13-204ENST00000438419 INVSQ9Y283 1065 aa5.08□□□□□ -1.6
TRAPPC13-204ENST00000438419 PTPN22Q9Y2R2 807 aa5.08□□□□□ -1.6
TRAPPC13-204ENST00000438419 ZDHHC9Q9Y397 364 aa5.08□□□□□ -1.6
TRAPPC13-204ENST00000438419 CDK11BP21127 795 aaKnown RBP5.07□□□□□ -1.6
TRAPPC13-204ENST00000438419 APEX1P27695 318 aaKnown RBP5.07□□□□□ -1.6
TRAPPC13-204ENST00000438419 ADCY8P40145 1251 aa5.07□□□□□ -1.6
TRAPPC13-204ENST00000438419 SLC6A3Q01959 620 aa5.07□□□□□ -1.6
TRAPPC13-204ENST00000438419 WDR72Q3MJ13 1102 aa5.07□□□□□ -1.6
TRAPPC13-204ENST00000438419 IQSEC1Q6DN90 963 aa5.07□□□□□ -1.6
TRAPPC13-204ENST00000438419 FRMD7Q6ZUT3 714 aa5.07□□□□□ -1.6
TRAPPC13-204ENST00000438419 RASSF3Q86WH2 238 aa5.07□□□□□ -1.6
TRAPPC13-204ENST00000438419 KBTBD2Q8IY47 623 aa5.07□□□□□ -1.6
TRAPPC13-204ENST00000438419 RTF1Q92541 710 aaKnown RBP5.07□□□□□ -1.6
TRAPPC13-204ENST00000438419 BARX1Q9HBU1 254 aaPredicted RBP5.07□□□□□ -1.6
TRAPPC13-204ENST00000438419 NOC2LQ9Y3T9 749 aaKnown RBP5.07□□□□□ -1.6
TRAPPC13-204ENST00000438419 ALG1L2C9J202 215 aa5.06□□□□□ -1.6
TRAPPC13-204ENST00000438419 MAFGO15525 162 aa5.06□□□□□ -1.6
TRAPPC13-204ENST00000438419 ZNF888P0CJ79 500 aaPredicted RBP5.06□□□□□ -1.6
TRAPPC13-204ENST00000438419 HSP90B1P14625 803 aaKnown RBP5.06□□□□□ -1.6
TRAPPC13-204ENST00000438419 RGS3P49796 1198 aa5.06□□□□□ -1.6
TRAPPC13-204ENST00000438419 ANAPC15P60006 121 aa5.06□□□□□ -1.6
TRAPPC13-204ENST00000438419 MAP3K12Q12852 859 aa5.06□□□□□ -1.6
TRAPPC13-204ENST00000438419 MOGSQ13724 837 aa5.06□□□□□ -1.6
TRAPPC13-204ENST00000438419 NFIXQ14938 502 aa5.06□□□□□ -1.6
TRAPPC13-204ENST00000438419 PRAMEF9Q5VWM5 478 aa5.06□□□□□ -1.6
TRAPPC13-204ENST00000438419 LHFPL2Q6ZUX7 228 aa5.06□□□□□ -1.6
TRAPPC13-204ENST00000438419 ESPNLQ6ZVH7 1005 aa5.06□□□□□ -1.6
TRAPPC13-204ENST00000438419 GPR155Q7Z3F1 870 aa5.06□□□□□ -1.6
TRAPPC13-204ENST00000438419 FAM124AQ86V42 546 aa5.06□□□□□ -1.6
TRAPPC13-204ENST00000438419 LGI4Q8N135 537 aa5.06□□□□□ -1.6
TRAPPC13-204ENST00000438419 BCL6BQ8N143 479 aaPredicted RBP5.06□□□□□ -1.6
TRAPPC13-204ENST00000438419 PRPF38AQ8NAV1 312 aaKnown RBP5.06□□□□□ -1.6
TRAPPC13-204ENST00000438419 CLRN3Q8NCR9 226 aa5.06□□□□□ -1.6
TRAPPC13-204ENST00000438419 RPGRQ92834 1020 aaKnown RBP5.06□□□□□ -1.6
TRAPPC13-204ENST00000438419 ZDHHC5Q9C0B5 715 aa5.06□□□□□ -1.6
TRAPPC13-204ENST00000438419 MSRAQ9UJ68 235 aa5.06□□□□□ -1.6
TRAPPC13-204ENST00000438419 PHLDB1Q86UU1 1377 aa5.06□□□□□ -1.6
TRAPPC13-204ENST00000438419 KDM1AO60341 852 aa5.06□□□□□ -1.6
TRAPPC13-204ENST00000438419 CUTAO60888 179 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms