RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 FAM26FQ5R3K3 315 aa25.49■■□□□ 1.67
CPSF4-204ENST00000436336 FAM200AQ8TCP9 573 aa25.49■■□□□ 1.67
CPSF4-204ENST00000436336 DRC1Q96MC2 740 aa25.49■■□□□ 1.67
CPSF4-204ENST00000436336 DHX33Q9H6R0 707 aaKnown RBP25.49■■□□□ 1.67
CPSF4-204ENST00000436336 HMX1Q9NP08 348 aaPredicted RBP25.49■■□□□ 1.67
CPSF4-204ENST00000436336 XPNPEP3Q9NQH7 507 aa25.49■■□□□ 1.67
CPSF4-204ENST00000436336 MSCO60682 206 aa25.49■■□□□ 1.67
CPSF4-204ENST00000436336 HSPA8P11142 646 aaKnown RBP25.49■■□□□ 1.67
CPSF4-204ENST00000436336 COBLL1Q53SF7 1204 aa25.49■■□□□ 1.67
CPSF4-204ENST00000436336 ZNF484Q5JVG2 852 aa25.49■■□□□ 1.67
CPSF4-204ENST00000436336 EXOC8Q8IYI6 725 aa25.49■■□□□ 1.67
CPSF4-204ENST00000436336 SMYD4Q8IYR2 804 aaPredicted RBP25.49■■□□□ 1.67
CPSF4-204ENST00000436336 DAW1Q8N136 415 aa25.49■■□□□ 1.67
CPSF4-204ENST00000436336 SLC7A3Q8WY07 619 aa25.49■■□□□ 1.67
CPSF4-204ENST00000436336 BPIFA3Q9BQP9 254 aa25.49■■□□□ 1.67
CPSF4-204ENST00000436336 SEL1LQ9UBV2 794 aa25.49■■□□□ 1.67
CPSF4-204ENST00000436336 COL1A2P08123 1366 aa25.48■■□□□ 1.67
CPSF4-204ENST00000436336 CEP350Q5VT06 3117 aa25.48■■□□□ 1.67
CPSF4-204ENST00000436336 EVPLQ92817 2033 aa25.48■■□□□ 1.67
CPSF4-204ENST00000436336 ADAMTS4O75173 837 aa25.48■■□□□ 1.67
CPSF4-204ENST00000436336 MYL3P08590 195 aa25.48■■□□□ 1.67
CPSF4-204ENST00000436336 PPP1R2P41236 205 aa25.48■■□□□ 1.67
CPSF4-204ENST00000436336 EMC2Q15006 297 aa25.48■■□□□ 1.67
CPSF4-204ENST00000436336 MAEAQ7L5Y9 396 aa25.48■■□□□ 1.67
CPSF4-204ENST00000436336 SFR1Q86XK3 245 aa25.48■■□□□ 1.67
CPSF4-204ENST00000436336 KIAA0895Q8NCT3 520 aa25.48■■□□□ 1.67
CPSF4-204ENST00000436336 HPS3Q969F9 1004 aa25.48■■□□□ 1.67
CPSF4-204ENST00000436336 RBSNQ9H1K0 784 aa25.48■■□□□ 1.67
CPSF4-204ENST00000436336 POLD4Q9HCU8 107 aa25.48■■□□□ 1.67
CPSF4-204ENST00000436336 SLC39A2Q9NP94 309 aa25.48■■□□□ 1.67
CPSF4-204ENST00000436336 XPNPEP1Q9NQW7 623 aa25.48■■□□□ 1.67
CPSF4-204ENST00000436336 OLFML3Q9NRN5 406 aa25.48■■□□□ 1.67
CPSF4-204ENST00000436336 PCDHA2Q9Y5H9 948 aa25.48■■□□□ 1.67
CPSF4-204ENST00000436336 MYADML2A6NDP7 307 aa25.47■■□□□ 1.67
CPSF4-204ENST00000436336 SFI1A8K8P3 1242 aa25.47■■□□□ 1.67
CPSF4-204ENST00000436336 ZBTB42B2RXF5 422 aa25.47■■□□□ 1.67
CPSF4-204ENST00000436336 PPP1R3GB7ZBB8 358 aa25.47■■□□□ 1.67
CPSF4-204ENST00000436336 ZEB2O60315 1214 aa25.47■■□□□ 1.67
CPSF4-204ENST00000436336 MAFO75444 373 aaPredicted RBP25.47■■□□□ 1.67
CPSF4-204ENST00000436336 PGK1P00558 417 aa25.47■■□□□ 1.67
CPSF4-204ENST00000436336 GNASQ5JWF2 1037 aa25.47■■□□□ 1.67
CPSF4-204ENST00000436336 FAM102BQ5T8I3 360 aa25.47■■□□□ 1.67
CPSF4-204ENST00000436336 MYCT1Q8N699 235 aa25.47■■□□□ 1.67
CPSF4-204ENST00000436336 KIFAP3Q92845 792 aa25.47■■□□□ 1.67
CPSF4-204ENST00000436336 LARSQ9P2J5 1176 aaKnown RBP25.47■■□□□ 1.67
CPSF4-204ENST00000436336 GOLGA6L3A6NEY3 463 aa25.46■■□□□ 1.67
CPSF4-204ENST00000436336 CD44P16070 742 aaKnown RBP25.46■■□□□ 1.67
CPSF4-204ENST00000436336 PRCPP42785 496 aa25.46■■□□□ 1.67
CPSF4-204ENST00000436336 TBC1D8BQ0IIM8 1120 aa25.46■■□□□ 1.67
CPSF4-204ENST00000436336 STIM1Q13586 685 aa25.46■■□□□ 1.67
CPSF4-204ENST00000436336 KAT2BQ92831 832 aa25.46■■□□□ 1.67
CPSF4-204ENST00000436336 KATNAL1Q9BW62 490 aa25.46■■□□□ 1.67
CPSF4-204ENST00000436336 FSD2A1L4K1 749 aa25.46■■□□□ 1.67
CPSF4-204ENST00000436336 INSRRP14616 1297 aa25.46■■□□□ 1.67
CPSF4-204ENST00000436336 PURAQ00577 322 aaKnown RBP25.46■■□□□ 1.67
CPSF4-204ENST00000436336 ADSSL1Q8N142 457 aa25.46■■□□□ 1.67
CPSF4-204ENST00000436336 SH3TC2Q8TF17 1288 aa25.46■■□□□ 1.67
CPSF4-204ENST00000436336 JPH2Q9BR39 696 aaPredicted RBP25.46■■□□□ 1.67
CPSF4-204ENST00000436336 C17orf75Q9HAS0 396 aa25.46■■□□□ 1.67
CPSF4-204ENST00000436336 CBX8Q9HC52 389 aa25.46■■□□□ 1.67
CPSF4-204ENST00000436336 SCN10AQ9Y5Y9 1956 aa25.45■■□□□ 1.66
CPSF4-204ENST00000436336 HAS3O00219 553 aa25.45■■□□□ 1.66
CPSF4-204ENST00000436336 GAS2O43903 313 aaKnown RBP25.45■■□□□ 1.66
CPSF4-204ENST00000436336 CST5P28325 142 aaPredicted RBP25.45■■□□□ 1.66
CPSF4-204ENST00000436336 ERCC5P28715 1186 aaPredicted RBP25.45■■□□□ 1.66
CPSF4-204ENST00000436336 ODR4Q5SWX8 454 aa25.45■■□□□ 1.66
CPSF4-204ENST00000436336 RNF214Q8ND24 703 aa25.45■■□□□ 1.66
CPSF4-204ENST00000436336 KLHDC9Q8NEP7 349 aa25.45■■□□□ 1.66
CPSF4-204ENST00000436336 GPRC5CQ9NQ84 441 aa25.45■■□□□ 1.66
CPSF4-204ENST00000436336 TBC1D7Q9P0N9 293 aa25.45■■□□□ 1.66
CPSF4-204ENST00000436336 PLS3P13797 630 aa25.44■■□□□ 1.66
CPSF4-204ENST00000436336 PSEN2P49810 448 aa25.44■■□□□ 1.66
CPSF4-204ENST00000436336 RTP1P59025 263 aa25.44■■□□□ 1.66
CPSF4-204ENST00000436336 MFSD10Q14728 455 aa25.44■■□□□ 1.66
CPSF4-204ENST00000436336 KIAA0753Q2KHM9 967 aa25.44■■□□□ 1.66
CPSF4-204ENST00000436336 MRPL44Q9H9J2 332 aaKnown RBP25.44■■□□□ 1.66
CPSF4-204ENST00000436336 IGKV6-21A0A0C4DH24 114 aa25.43■■□□□ 1.66
CPSF4-204ENST00000436336 MAPTP10636 758 aaKnown RBP25.43■■□□□ 1.66
CPSF4-204ENST00000436336 IQCB1Q15051 598 aa25.43■■□□□ 1.66
CPSF4-204ENST00000436336 SLC9C1Q4G0N8 1177 aa25.43■■□□□ 1.66
CPSF4-204ENST00000436336 CTU1Q7Z7A3 348 aaKnown RBP25.43■■□□□ 1.66
CPSF4-204ENST00000436336 FAM178BQ8IXR5 827 aa25.43■■□□□ 1.66
CPSF4-204ENST00000436336 GUF1Q8N442 669 aaKnown RBP25.43■■□□□ 1.66
CPSF4-204ENST00000436336 MAPK8IP1Q9UQF2 711 aa25.43■■□□□ 1.66
CPSF4-204ENST00000436336 HSPA1AP0DMV8 641 aaKnown RBP25.43■■□□□ 1.66
CPSF4-204ENST00000436336 HSPA1BP0DMV9 641 aaKnown RBP25.43■■□□□ 1.66
CPSF4-204ENST00000436336 CTCFP49711 727 aaPredicted RBP25.43■■□□□ 1.66
CPSF4-204ENST00000436336 PPFIA1Q13136 1202 aa25.43■■□□□ 1.66
CPSF4-204ENST00000436336 KLHL10Q6JEL2 608 aa25.43■■□□□ 1.66
CPSF4-204ENST00000436336 TRAPPC12Q8WVT3 735 aa25.43■■□□□ 1.66
CPSF4-204ENST00000436336 DHTKD1Q96HY7 919 aaPredicted RBP25.43■■□□□ 1.66
CPSF4-204ENST00000436336 FIZ1Q96SL8 496 aa25.43■■□□□ 1.66
CPSF4-204ENST00000436336 MTG1Q9BT17 334 aaPredicted RBP25.43■■□□□ 1.66
CPSF4-204ENST00000436336 HTTP42858 3142 aa25.43■■□□□ 1.66
CPSF4-204ENST00000436336 PSMA7O14818 248 aa25.42■■□□□ 1.66
CPSF4-204ENST00000436336 MAGEB2O15479 319 aa25.42■■□□□ 1.66
CPSF4-204ENST00000436336 KIF20AO95235 890 aa25.42■■□□□ 1.66
CPSF4-204ENST00000436336 RNF180Q86T96 592 aa25.42■■□□□ 1.66
CPSF4-204ENST00000436336 MYOCDQ8IZQ8 938 aa25.42■■□□□ 1.66
CPSF4-204ENST00000436336 PCSK9Q8NBP7 692 aaKnown RBP25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms