RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 MAPTP10636 758 aaKnown RBP11.38□□□□□ -0.59
CD44-210ENST00000434472 BCRP11274 1271 aa11.38□□□□□ -0.59
CD44-210ENST00000434472 LMNB1P20700 586 aa11.38□□□□□ -0.59
CD44-210ENST00000434472 RFX1P22670 979 aa11.38□□□□□ -0.59
CD44-210ENST00000434472 NMT1P30419 496 aaKnown RBP11.38□□□□□ -0.59
CD44-210ENST00000434472 GGCXP38435 758 aa11.38□□□□□ -0.59
CD44-210ENST00000434472 CASP4P49662 377 aa11.38□□□□□ -0.59
CD44-210ENST00000434472 PPFIA1Q13136 1202 aa11.38□□□□□ -0.59
CD44-210ENST00000434472 EZH2Q15910 746 aaKnown RBP11.38□□□□□ -0.59
CD44-210ENST00000434472 ENOX2Q16206 610 aaKnown RBP11.38□□□□□ -0.59
CD44-210ENST00000434472 TUBB8Q3ZCM7 444 aa11.38□□□□□ -0.59
CD44-210ENST00000434472 ZNF720Q7Z2F6 126 aa11.38□□□□□ -0.59
CD44-210ENST00000434472 FAM83AQ86UY5 434 aa11.38□□□□□ -0.59
CD44-210ENST00000434472 SLC9A9Q8IVB4 645 aa11.38□□□□□ -0.59
CD44-210ENST00000434472 FAM178BQ8IXR5 827 aa11.38□□□□□ -0.59
CD44-210ENST00000434472 MTMR14Q8NCE2 650 aa11.38□□□□□ -0.59
CD44-210ENST00000434472 FAM76AQ8TAV0 307 aa11.38□□□□□ -0.59
CD44-210ENST00000434472 PIGOQ8TEQ8 1089 aa11.38□□□□□ -0.59
CD44-210ENST00000434472 HDAC7Q8WUI4 952 aa11.38□□□□□ -0.59
CD44-210ENST00000434472 CALR3Q96L12 384 aaKnown RBP11.38□□□□□ -0.59
CD44-210ENST00000434472 INPP4AQ96PE3 977 aaPredicted RBP11.38□□□□□ -0.59
CD44-210ENST00000434472 PSMB7Q99436 277 aa11.38□□□□□ -0.59
CD44-210ENST00000434472 PSMD1Q99460 953 aa11.38□□□□□ -0.59
CD44-210ENST00000434472 MXRA8Q9BRK3 442 aa11.38□□□□□ -0.59
CD44-210ENST00000434472 STK33Q9BYT3 514 aa11.38□□□□□ -0.59
CD44-210ENST00000434472 DMAC2Q9NW81 257 aa11.38□□□□□ -0.59
CD44-210ENST00000434472 PSME4Q14997 1843 aa11.37□□□□□ -0.59
CD44-210ENST00000434472 ZMYM2Q9UBW7 1377 aa11.37□□□□□ -0.59
CD44-210ENST00000434472 SOCS7O14512 581 aa11.37□□□□□ -0.59
CD44-210ENST00000434472 CHMP2AO43633 222 aa11.37□□□□□ -0.59
CD44-210ENST00000434472 PHACTR2O75167 634 aa11.37□□□□□ -0.59
CD44-210ENST00000434472 KIF4AO95239 1232 aa11.37□□□□□ -0.59
CD44-210ENST00000434472 NOP2P46087 812 aaKnown RBP11.37□□□□□ -0.59
CD44-210ENST00000434472 FMO5P49326 533 aa11.37□□□□□ -0.59
CD44-210ENST00000434472 B3GNT9Q6UX72 402 aa11.37□□□□□ -0.59
CD44-210ENST00000434472 LDHDQ86WU2 507 aa11.37□□□□□ -0.59
CD44-210ENST00000434472 MCF2L2Q86YR7 1114 aa11.37□□□□□ -0.59
CD44-210ENST00000434472 GSPT2Q8IYD1 628 aaKnown RBP11.37□□□□□ -0.59
CD44-210ENST00000434472 USP38Q8NB14 1042 aa11.37□□□□□ -0.59
CD44-210ENST00000434472 ACTRT1Q8TDG2 376 aa11.37□□□□□ -0.59
CD44-210ENST00000434472 WHAMMQ8TF30 809 aa11.37□□□□□ -0.59
CD44-210ENST00000434472 GMLQ99445 158 aa11.37□□□□□ -0.59
CD44-210ENST00000434472 PACSIN1Q9BY11 444 aa11.37□□□□□ -0.59
CD44-210ENST00000434472 UNC45AQ9H3U1 944 aa11.37□□□□□ -0.59
CD44-210ENST00000434472 TMEM206Q9H813 350 aa11.37□□□□□ -0.59
CD44-210ENST00000434472 MAP3K20Q9NYL2 800 aaKnown RBP11.37□□□□□ -0.59
CD44-210ENST00000434472 PNMA2Q9UL42 364 aa11.37□□□□□ -0.59
CD44-210ENST00000434472 RGPD3A6NKT7 1758 aaPredicted RBP11.37□□□□□ -0.59
CD44-210ENST00000434472 RGPD4Q7Z3J3 1758 aa11.37□□□□□ -0.59
CD44-210ENST00000434472 CNTNAP1P78357 1384 aa11.36□□□□□ -0.59
CD44-210ENST00000434472 CLRN2A0PK11 232 aa11.36□□□□□ -0.59
CD44-210ENST00000434472 SFI1A8K8P3 1242 aa11.36□□□□□ -0.59
CD44-210ENST00000434472 AGPSO00116 658 aa11.36□□□□□ -0.59
CD44-210ENST00000434472 HEXIM1O94992 359 aaKnown RBP11.36□□□□□ -0.59
CD44-210ENST00000434472 TAL1P17542 331 aaPredicted RBP11.36□□□□□ -0.59
CD44-210ENST00000434472 SOX5P35711 763 aa11.36□□□□□ -0.59
CD44-210ENST00000434472 CAP2P40123 477 aa11.36□□□□□ -0.59
CD44-210ENST00000434472 HSD17B4P51659 736 aa11.36□□□□□ -0.59
CD44-210ENST00000434472 SNRPFP62306 86 aaKnown RBP11.36□□□□□ -0.59
CD44-210ENST00000434472 SLC7A5Q01650 507 aa11.36□□□□□ -0.59
CD44-210ENST00000434472 KIAA1755Q5JYT7 1200 aa11.36□□□□□ -0.59
CD44-210ENST00000434472 ODR4Q5SWX8 454 aa11.36□□□□□ -0.59
CD44-210ENST00000434472 ILDR2Q71H61 639 aa11.36□□□□□ -0.59
CD44-210ENST00000434472 MIER3Q7Z3K6 550 aa11.36□□□□□ -0.59
CD44-210ENST00000434472 MREGQ8N565 214 aa11.36□□□□□ -0.59
CD44-210ENST00000434472 RBM46Q8TBY0 533 aaKnown RBP11.36□□□□□ -0.59
CD44-210ENST00000434472 MS4A14Q96JA4 679 aa11.36□□□□□ -0.59
CD44-210ENST00000434472 FIZ1Q96SL8 496 aa11.36□□□□□ -0.59
CD44-210ENST00000434472 SH3GL2Q99962 352 aa11.36□□□□□ -0.59
CD44-210ENST00000434472 TIPINQ9BVW5 301 aa11.36□□□□□ -0.59
CD44-210ENST00000434472 AGPAT3Q9NRZ7 376 aa11.36□□□□□ -0.59
CD44-210ENST00000434472 SMARCAL1Q9NZC9 954 aa11.36□□□□□ -0.59
CD44-210ENST00000434472 EHD2Q9NZN4 543 aa11.36□□□□□ -0.59
CD44-210ENST00000434472 SUCLA2Q9P2R7 463 aaPredicted RBP11.36□□□□□ -0.59
CD44-210ENST00000434472 DIS3Q9Y2L1 958 aaKnown RBP11.36□□□□□ -0.59
CD44-210ENST00000434472 GOLGA6CA6NDK9 693 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 CCDC188H7C350 402 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 IPO5O00410 1097 aaKnown RBP11.35□□□□□ -0.59
CD44-210ENST00000434472 KCNK3O14649 394 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 P4HA2O15460 535 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 C21orf2O43822 256 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 ICAM1P05362 532 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 P4HBP07237 508 aaKnown RBP11.35□□□□□ -0.59
CD44-210ENST00000434472 ASNSP08243 561 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 GOLGA6DP0CG33 693 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 ARP10275 920 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 KRT13P13646 458 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 PTGER2P43116 358 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 GHRHRQ02643 423 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 CETN1Q12798 172 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 CLUL1Q15846 466 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 SLFN11Q7Z7L1 901 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 C12orf56Q8IXR9 622 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 SYCP3Q8IZU3 236 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 LRRC57Q8N9N7 239 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 AGBL3Q8NEM8 1001 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 TPCN2Q8NHX9 752 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 U2AF1L4Q8WU68 220 aaKnown RBP11.35□□□□□ -0.59
CD44-210ENST00000434472 TMEM174Q8WUU8 243 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 KRT12Q99456 494 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms