RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 IQCB1Q15051 598 aa12.46□□□□□ -0.41
PTCH1-208ENST00000430669 DNAJC21Q5F1R6 531 aaKnown RBP12.46□□□□□ -0.41
PTCH1-208ENST00000430669 VGLL2Q8N8G2 317 aa12.46□□□□□ -0.41
PTCH1-208ENST00000430669 TRIM31Q9BZY9 425 aa12.46□□□□□ -0.41
PTCH1-208ENST00000430669 PPP2R3BQ9Y5P8 575 aa12.46□□□□□ -0.41
PTCH1-208ENST00000430669 A0A1W2PQJ5 194 aa12.46□□□□□ -0.41
PTCH1-208ENST00000430669 EIF3BP55884 814 aaKnown RBP12.46□□□□□ -0.41
PTCH1-208ENST00000430669 HVCN1Q96D96 273 aa12.46□□□□□ -0.41
PTCH1-208ENST00000430669 TMEM260Q9NX78 707 aa12.46□□□□□ -0.41
PTCH1-208ENST00000430669 KCPQ6ZWJ8 1503 aa12.46□□□□□ -0.41
PTCH1-208ENST00000430669 LAMB1P07942 1786 aa12.46□□□□□ -0.41
PTCH1-208ENST00000430669 VAMP7P51809 220 aa12.46□□□□□ -0.42
PTCH1-208ENST00000430669 BANK1Q8NDB2 785 aa12.46□□□□□ -0.42
PTCH1-208ENST00000430669 TEX13BQ9BXU2 312 aa12.46□□□□□ -0.42
PTCH1-208ENST00000430669 PCDHA10Q9Y5I2 948 aa12.46□□□□□ -0.42
PTCH1-208ENST00000430669 GGPS1O95749 300 aa12.46□□□□□ -0.42
PTCH1-208ENST00000430669 TAP1Q03518 808 aa12.46□□□□□ -0.42
PTCH1-208ENST00000430669 C15orf52Q6ZUT6 534 aaKnown RBP12.46□□□□□ -0.42
PTCH1-208ENST00000430669 LDHDQ86WU2 507 aa12.46□□□□□ -0.42
PTCH1-208ENST00000430669 METTL23Q86XA0 190 aa12.46□□□□□ -0.42
PTCH1-208ENST00000430669 ZNF70Q9UC06 446 aaPredicted RBP12.46□□□□□ -0.42
PTCH1-208ENST00000430669 MCF2LO15068 1137 aa12.46□□□□□ -0.42
PTCH1-208ENST00000430669 NDUFB10O96000 172 aa12.46□□□□□ -0.42
PTCH1-208ENST00000430669 UAP1Q16222 522 aaPredicted RBP12.46□□□□□ -0.42
PTCH1-208ENST00000430669 DNAJC24Q6P3W2 148 aa12.45□□□□□ -0.42
PTCH1-208ENST00000430669 BZW1Q7L1Q6 419 aaKnown RBP12.45□□□□□ -0.42
PTCH1-208ENST00000430669 SFR1Q86XK3 245 aa12.45□□□□□ -0.42
PTCH1-208ENST00000430669 PALM2Q8IXS6 379 aa12.45□□□□□ -0.42
PTCH1-208ENST00000430669 CHRNA5P30532 468 aa12.45□□□□□ -0.42
PTCH1-208ENST00000430669 EFNA5P52803 228 aa12.45□□□□□ -0.42
PTCH1-208ENST00000430669 CCDC97Q96F63 343 aaPredicted RBP12.45□□□□□ -0.42
PTCH1-208ENST00000430669 ATP11AP98196 1134 aa12.45□□□□□ -0.42
PTCH1-208ENST00000430669 BFSP1Q12934 665 aa12.45□□□□□ -0.42
PTCH1-208ENST00000430669 EMBQ6PCB8 327 aa12.45□□□□□ -0.42
PTCH1-208ENST00000430669 VCPKMTQ9H867 229 aa12.45□□□□□ -0.42
PTCH1-208ENST00000430669 TFAMQ00059 246 aaKnown RBP12.45□□□□□ -0.42
PTCH1-208ENST00000430669 PRPSAP1Q14558 356 aa12.45□□□□□ -0.42
PTCH1-208ENST00000430669 FBF1Q8TES7 1133 aa12.45□□□□□ -0.42
PTCH1-208ENST00000430669 FAM193BQ96PV7 902 aaPredicted RBP12.45□□□□□ -0.42
PTCH1-208ENST00000430669 RAVER2Q9HCJ3 691 aaKnown RBP12.45□□□□□ -0.42
PTCH1-208ENST00000430669 DONSONQ9NYP3 566 aa12.45□□□□□ -0.42
PTCH1-208ENST00000430669 MAST2Q6P0Q8 1798 aa12.45□□□□□ -0.42
PTCH1-208ENST00000430669 GUCY2DQ02846 1103 aa12.45□□□□□ -0.42
PTCH1-208ENST00000430669 NR1I3Q14994 352 aa12.45□□□□□ -0.42
PTCH1-208ENST00000430669 SLMAPQ14BN4 828 aa12.45□□□□□ -0.42
PTCH1-208ENST00000430669 ARHGAP24Q8N264 748 aa12.45□□□□□ -0.42
PTCH1-208ENST00000430669 ACRBPQ8NEB7 543 aa12.45□□□□□ -0.42
PTCH1-208ENST00000430669 EEF2KMTQ96G04 330 aa12.45□□□□□ -0.42
PTCH1-208ENST00000430669 DYDC2Q96IM9 177 aa12.45□□□□□ -0.42
PTCH1-208ENST00000430669 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.45□□□□□ -0.42
PTCH1-208ENST00000430669 IPO11Q9UI26 975 aaKnown RBP12.45□□□□□ -0.42
PTCH1-208ENST00000430669 CRYBG1Q9Y4K1 1723 aa12.45□□□□□ -0.42
PTCH1-208ENST00000430669 ASB14A6NK59 587 aa12.45□□□□□ -0.42
PTCH1-208ENST00000430669 TDP2O95551 362 aa12.45□□□□□ -0.42
PTCH1-208ENST00000430669 MXD4Q14582 209 aaPredicted RBP12.45□□□□□ -0.42
PTCH1-208ENST00000430669 BCL9LQ86UU0 1499 aa12.45□□□□□ -0.42
PTCH1-208ENST00000430669 IGBP1P78318 339 aa12.44□□□□□ -0.42
PTCH1-208ENST00000430669 MESDQ14696 234 aa12.44□□□□□ -0.42
PTCH1-208ENST00000430669 RTFDC1Q9BY42 306 aaPredicted RBP12.44□□□□□ -0.42
PTCH1-208ENST00000430669 FAM83AQ86UY5 434 aa12.44□□□□□ -0.42
PTCH1-208ENST00000430669 POLR3CQ9BUI4 534 aaPredicted RBP12.44□□□□□ -0.42
PTCH1-208ENST00000430669 IL25Q9H293 177 aa12.44□□□□□ -0.42
PTCH1-208ENST00000430669 CNOT10Q9H9A5 744 aaKnown RBP12.44□□□□□ -0.42
PTCH1-208ENST00000430669 COBLO75128 1261 aa12.44□□□□□ -0.42
PTCH1-208ENST00000430669 ZSCAN20P17040 1043 aaPredicted RBP12.44□□□□□ -0.42
PTCH1-208ENST00000430669 MTMR2Q13614 643 aa12.44□□□□□ -0.42
PTCH1-208ENST00000430669 ANKS1AQ92625 1134 aa12.44□□□□□ -0.42
PTCH1-208ENST00000430669 KDM4FA0A1W2PPD8 638 aa12.44□□□□□ -0.42
PTCH1-208ENST00000430669 FOXP2O15409 715 aa12.44□□□□□ -0.42
PTCH1-208ENST00000430669 TJP3O95049 919 aa12.44□□□□□ -0.42
PTCH1-208ENST00000430669 CAV1Q03135 178 aa12.44□□□□□ -0.42
PTCH1-208ENST00000430669 SGO2Q562F6 1265 aa12.44□□□□□ -0.42
PTCH1-208ENST00000430669 HHATQ5VTY9 493 aa12.44□□□□□ -0.42
PTCH1-208ENST00000430669 RBM43Q6ZSC3 357 aaKnown RBP12.44□□□□□ -0.42
PTCH1-208ENST00000430669 CCDC110Q8TBZ0 833 aa12.44□□□□□ -0.42
PTCH1-208ENST00000430669 PSPC1Q8WXF1 523 aaKnown RBP12.44□□□□□ -0.42
PTCH1-208ENST00000430669 C17orf75Q9HAS0 396 aa12.44□□□□□ -0.42
PTCH1-208ENST00000430669 KRT15P19012 456 aa12.44□□□□□ -0.42
PTCH1-208ENST00000430669 TOGARAM2Q6ZUX3 1019 aa12.44□□□□□ -0.42
PTCH1-208ENST00000430669 MAGOHBQ96A72 148 aaKnown RBP12.44□□□□□ -0.42
PTCH1-208ENST00000430669 NBPF3Q9H094 633 aa12.44□□□□□ -0.42
PTCH1-208ENST00000430669 SRGNP10124 158 aa12.44□□□□□ -0.42
PTCH1-208ENST00000430669 FAM47CQ5HY64 1035 aa12.44□□□□□ -0.42
PTCH1-208ENST00000430669 CASC4Q6P4E1 433 aa12.44□□□□□ -0.42
PTCH1-208ENST00000430669 CCDC62Q6P9F0 684 aa12.44□□□□□ -0.42
PTCH1-208ENST00000430669 ARMCX2Q7L311 632 aa12.44□□□□□ -0.42
PTCH1-208ENST00000430669 PCGF5Q86SE9 256 aa12.44□□□□□ -0.42
PTCH1-208ENST00000430669 RIT2Q99578 217 aa12.44□□□□□ -0.42
PTCH1-208ENST00000430669 PCIF1Q9H4Z3 704 aa12.44□□□□□ -0.42
PTCH1-208ENST00000430669 PRR12Q9ULL5 1215 aa12.44□□□□□ -0.42
PTCH1-208ENST00000430669 A0A087WWV3 80 aa12.44□□□□□ -0.42
PTCH1-208ENST00000430669 FDPSP14324 419 aaKnown RBP12.44□□□□□ -0.42
PTCH1-208ENST00000430669 CACNB1Q02641 598 aaPredicted RBP12.44□□□□□ -0.42
PTCH1-208ENST00000430669 MAP7D1Q3KQU3 841 aa12.44□□□□□ -0.42
PTCH1-208ENST00000430669 KRT39Q6A163 491 aa12.44□□□□□ -0.42
PTCH1-208ENST00000430669 ALKBH5Q6P6C2 394 aaKnown RBP12.44□□□□□ -0.42
PTCH1-208ENST00000430669 TOPORSQ9NS56 1045 aaPredicted RBP12.44□□□□□ -0.42
PTCH1-208ENST00000430669 CNOT7Q9UIV1 285 aaKnown RBP12.44□□□□□ -0.42
PTCH1-208ENST00000430669 GAS2O43903 313 aaKnown RBP12.43□□□□□ -0.42
PTCH1-208ENST00000430669 SRGAP2BP0DMP2 458 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms