RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 INTUQ9ULD6 942 aa12.22□□□□□ -0.45
SEC61A1-202ENST00000424880 BCL9O00512 1426 aa12.22□□□□□ -0.45
SEC61A1-202ENST00000424880 ETS2P15036 469 aa12.22□□□□□ -0.45
SEC61A1-202ENST00000424880 USP11P51784 963 aa12.22□□□□□ -0.45
SEC61A1-202ENST00000424880 BNIP1Q12981 228 aa12.22□□□□□ -0.45
SEC61A1-202ENST00000424880 ZNF513Q8N8E2 541 aaPredicted RBP12.22□□□□□ -0.45
SEC61A1-202ENST00000424880 SPOCK2Q92563 424 aa12.22□□□□□ -0.45
SEC61A1-202ENST00000424880 POP1Q99575 1024 aaKnown RBP12.22□□□□□ -0.45
SEC61A1-202ENST00000424880 NUDT12Q9BQG2 462 aa12.22□□□□□ -0.45
SEC61A1-202ENST00000424880 VAT1LQ9HCJ6 419 aa12.22□□□□□ -0.45
SEC61A1-202ENST00000424880 ITGB4P16144 1822 aa12.22□□□□□ -0.45
SEC61A1-202ENST00000424880 TMEM120BA0PK00 339 aa12.22□□□□□ -0.45
SEC61A1-202ENST00000424880 USP17L12C9JPN9 530 aa12.22□□□□□ -0.45
SEC61A1-202ENST00000424880 USP17L21D6R901 530 aa12.22□□□□□ -0.45
SEC61A1-202ENST00000424880 CYP2D6P10635 497 aa12.22□□□□□ -0.45
SEC61A1-202ENST00000424880 CNGA2Q16280 664 aa12.22□□□□□ -0.45
SEC61A1-202ENST00000424880 FOXB2Q5VYV0 432 aa12.22□□□□□ -0.45
SEC61A1-202ENST00000424880 ANKLE1Q8NAG6 615 aa12.22□□□□□ -0.45
SEC61A1-202ENST00000424880 NEK9Q8TD19 979 aa12.22□□□□□ -0.45
SEC61A1-202ENST00000424880 RAB17Q9H0T7 212 aa12.22□□□□□ -0.45
SEC61A1-202ENST00000424880 ARHGEF3Q9NR81 526 aa12.22□□□□□ -0.45
SEC61A1-202ENST00000424880 BCS1LQ9Y276 419 aa12.22□□□□□ -0.45
SEC61A1-202ENST00000424880 ABCC12Q96J65 1359 aa12.22□□□□□ -0.45
SEC61A1-202ENST00000424880 RIC1Q4ADV7 1423 aa12.21□□□□□ -0.45
SEC61A1-202ENST00000424880 SLIT2O94813 1529 aa12.21□□□□□ -0.45
SEC61A1-202ENST00000424880 MYH4Q9Y623 1939 aa12.21□□□□□ -0.45
SEC61A1-202ENST00000424880 POTEMA6NI47 508 aa12.21□□□□□ -0.45
SEC61A1-202ENST00000424880 ABLIM1O14639 778 aa12.21□□□□□ -0.45
SEC61A1-202ENST00000424880 FAM163BP0C2L3 166 aa12.21□□□□□ -0.45
SEC61A1-202ENST00000424880 IMPDH2P12268 514 aa12.21□□□□□ -0.45
SEC61A1-202ENST00000424880 EPHB2P29323 1055 aa12.21□□□□□ -0.45
SEC61A1-202ENST00000424880 EPS15P42566 896 aa12.21□□□□□ -0.45
SEC61A1-202ENST00000424880 PTDSS1P48651 473 aaKnown RBP12.21□□□□□ -0.45
SEC61A1-202ENST00000424880 DR1Q01658 176 aa12.21□□□□□ -0.45
SEC61A1-202ENST00000424880 MPP2Q14168 576 aa12.21□□□□□ -0.45
SEC61A1-202ENST00000424880 PLS1Q14651 629 aa12.21□□□□□ -0.45
SEC61A1-202ENST00000424880 CENPPQ6IPU0 288 aa12.21□□□□□ -0.45
SEC61A1-202ENST00000424880 SPATA21Q7Z572 469 aa12.21□□□□□ -0.45
SEC61A1-202ENST00000424880 EXOC3L1Q86VI1 746 aa12.21□□□□□ -0.45
SEC61A1-202ENST00000424880 TEX9Q8N6V9 391 aa12.21□□□□□ -0.45
SEC61A1-202ENST00000424880 DTX3LQ8TDB6 740 aa12.21□□□□□ -0.45
SEC61A1-202ENST00000424880 NUP188Q5SRE5 1749 aa12.21□□□□□ -0.45
SEC61A1-202ENST00000424880 GOLGA6L10A0A0M3HER8 536 aa12.21□□□□□ -0.46
SEC61A1-202ENST00000424880 CBX6O95503 412 aa12.21□□□□□ -0.46
SEC61A1-202ENST00000424880 KCNJ1P48048 391 aa12.21□□□□□ -0.46
SEC61A1-202ENST00000424880 PDE6CP51160 858 aa12.21□□□□□ -0.46
SEC61A1-202ENST00000424880 ALX1Q15699 326 aa12.21□□□□□ -0.46
SEC61A1-202ENST00000424880 C1QTNF12Q5T7M4 302 aa12.21□□□□□ -0.46
SEC61A1-202ENST00000424880 SPTY2D1Q68D10 685 aaPredicted RBP12.21□□□□□ -0.46
SEC61A1-202ENST00000424880 ALKBH5Q6P6C2 394 aaKnown RBP12.21□□□□□ -0.46
SEC61A1-202ENST00000424880 BARGINQ6ZT62 677 aa12.21□□□□□ -0.46
SEC61A1-202ENST00000424880 ANKRD23Q86SG2 305 aa12.21□□□□□ -0.46
SEC61A1-202ENST00000424880 HOOK3Q86VS8 718 aa12.21□□□□□ -0.46
SEC61A1-202ENST00000424880 SYCP3Q8IZU3 236 aa12.21□□□□□ -0.46
SEC61A1-202ENST00000424880 SSU72P8A0A1W2PR75 194 aa12.2□□□□□ -0.46
SEC61A1-202ENST00000424880 PDLIM1O00151 329 aa12.2□□□□□ -0.46
SEC61A1-202ENST00000424880 SUN1O94901 812 aa12.2□□□□□ -0.46
SEC61A1-202ENST00000424880 ZCCHC18P0CG32 403 aa12.2□□□□□ -0.46
SEC61A1-202ENST00000424880 ASIC2Q16515 512 aa12.2□□□□□ -0.46
SEC61A1-202ENST00000424880 MUM1Q2TAK8 710 aa12.2□□□□□ -0.46
SEC61A1-202ENST00000424880 KCNK18Q7Z418 384 aa12.2□□□□□ -0.46
SEC61A1-202ENST00000424880 VSIG1Q86XK7 387 aa12.2□□□□□ -0.46
SEC61A1-202ENST00000424880 RBM12BQ8IXT5 1001 aaKnown RBP12.2□□□□□ -0.46
SEC61A1-202ENST00000424880 FBF1Q8TES7 1133 aa12.2□□□□□ -0.46
SEC61A1-202ENST00000424880 PWWP2AQ96N64 755 aa12.2□□□□□ -0.46
SEC61A1-202ENST00000424880 PABPC3Q9H361 631 aaKnown RBP12.2□□□□□ -0.46
SEC61A1-202ENST00000424880 RNF41Q9H4P4 317 aaPredicted RBP12.2□□□□□ -0.46
SEC61A1-202ENST00000424880 PPP1R9AQ9ULJ8 1098 aa12.2□□□□□ -0.46
SEC61A1-202ENST00000424880 SPATA31A1Q5TZJ5 1347 aa12.2□□□□□ -0.46
SEC61A1-202ENST00000424880 TMEM110-MUSTN1A8MSY1 372 aa12.2□□□□□ -0.46
SEC61A1-202ENST00000424880 SP100P23497 879 aaPredicted RBP12.2□□□□□ -0.46
SEC61A1-202ENST00000424880 YY1P25490 414 aa12.2□□□□□ -0.46
SEC61A1-202ENST00000424880 ARL6IP4Q66PJ3 421 aaKnown RBP12.2□□□□□ -0.46
SEC61A1-202ENST00000424880 CNNM4Q6P4Q7 775 aa12.2□□□□□ -0.46
SEC61A1-202ENST00000424880 APBB1IPQ7Z5R6 666 aaPredicted RBP12.2□□□□□ -0.46
SEC61A1-202ENST00000424880 SDCCAG8Q86SQ7 713 aaPredicted RBP12.2□□□□□ -0.46
SEC61A1-202ENST00000424880 NCAPG2Q86XI2 1143 aa12.2□□□□□ -0.46
SEC61A1-202ENST00000424880 ERP27Q96DN0 273 aa12.2□□□□□ -0.46
SEC61A1-202ENST00000424880 SEPT11Q9NVA2 429 aaKnown RBP12.2□□□□□ -0.46
SEC61A1-202ENST00000424880 LNPEPQ9UIQ6 1025 aa12.2□□□□□ -0.46
SEC61A1-202ENST00000424880 PCDHA6Q9UN73 950 aa12.2□□□□□ -0.46
SEC61A1-202ENST00000424880 PCDHA8Q9Y5H6 950 aa12.2□□□□□ -0.46
SEC61A1-202ENST00000424880 FLT1P17948 1338 aa12.2□□□□□ -0.46
SEC61A1-202ENST00000424880 NID2Q14112 1375 aa12.2□□□□□ -0.46
SEC61A1-202ENST00000424880 RTL9Q8NET4 1388 aa12.2□□□□□ -0.46
SEC61A1-202ENST00000424880 ANKRD63C9JTQ0 380 aa12.2□□□□□ -0.46
SEC61A1-202ENST00000424880 IRS4O14654 1257 aaPredicted RBP12.2□□□□□ -0.46
SEC61A1-202ENST00000424880 RASGRF2O14827 1237 aa12.2□□□□□ -0.46
SEC61A1-202ENST00000424880 IFI16Q16666 785 aaKnown RBP12.2□□□□□ -0.46
SEC61A1-202ENST00000424880 PFKFB3Q16875 520 aaPredicted RBP12.2□□□□□ -0.46
SEC61A1-202ENST00000424880 DCAF12L1Q5VU92 463 aa12.2□□□□□ -0.46
SEC61A1-202ENST00000424880 LRRC55Q6ZSA7 311 aa12.2□□□□□ -0.46
SEC61A1-202ENST00000424880 ATL2Q8NHH9 583 aa12.2□□□□□ -0.46
SEC61A1-202ENST00000424880 TPCN2Q8NHX9 752 aa12.2□□□□□ -0.46
SEC61A1-202ENST00000424880 MRRFQ96E11 262 aaKnown RBP12.2□□□□□ -0.46
SEC61A1-202ENST00000424880 GORASP1Q9BQQ3 440 aa12.2□□□□□ -0.46
SEC61A1-202ENST00000424880 DAAM1Q9Y4D1 1078 aa12.2□□□□□ -0.46
SEC61A1-202ENST00000424880 USH1CQ9Y6N9 552 aa12.2□□□□□ -0.46
SEC61A1-202ENST00000424880 RPTORQ8N122 1335 aa12.19□□□□□ -0.46
SEC61A1-202ENST00000424880 GPR75-ASB3A0A0A6YYF3 556 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms