RNA–Protein interactions for RNA: ENST00000412844.6

NR1I3-208, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-208ENST00000412844 TMEM179Q6ZVK1 233 aa8.09□□□□□ -1.11
NR1I3-208ENST00000412844 DYMQ7RTS9 669 aa8.09□□□□□ -1.11
NR1I3-208ENST00000412844 PCSK9Q8NBP7 692 aaKnown RBP8.09□□□□□ -1.11
NR1I3-208ENST00000412844 GLT1D1Q96MS3 346 aa8.09□□□□□ -1.11
NR1I3-208ENST00000412844 TINF2Q9BSI4 451 aa8.09□□□□□ -1.11
NR1I3-208ENST00000412844 TANGO6Q9C0B7 1094 aa8.09□□□□□ -1.11
NR1I3-208ENST00000412844 ATXN3LQ9H3M9 355 aa8.09□□□□□ -1.11
NR1I3-208ENST00000412844 PIDD1Q9HB75 910 aa8.09□□□□□ -1.11
NR1I3-208ENST00000412844 CACNA2D2Q9NY47 1150 aa8.09□□□□□ -1.11
NR1I3-208ENST00000412844 SWAP70Q9UH65 585 aa8.09□□□□□ -1.11
NR1I3-208ENST00000412844 WDR46O15213 610 aaKnown RBP8.08□□□□□ -1.12
NR1I3-208ENST00000412844 IPO8O15397 1037 aaKnown RBP8.08□□□□□ -1.12
NR1I3-208ENST00000412844 COBLO75128 1261 aa8.08□□□□□ -1.12
NR1I3-208ENST00000412844 TIAF1O95411 115 aa8.08□□□□□ -1.12
NR1I3-208ENST00000412844 CYP7A1P22680 504 aa8.08□□□□□ -1.12
NR1I3-208ENST00000412844 CST5P28325 142 aaPredicted RBP8.08□□□□□ -1.12
NR1I3-208ENST00000412844 PREPP48147 710 aa8.08□□□□□ -1.12
NR1I3-208ENST00000412844 ACLYP53396 1101 aa8.08□□□□□ -1.12
NR1I3-208ENST00000412844 SLFN5Q08AF3 891 aa8.08□□□□□ -1.12
NR1I3-208ENST00000412844 PLA2G4EQ3MJ16 856 aa8.08□□□□□ -1.12
NR1I3-208ENST00000412844 FBXL19Q6PCT2 694 aa8.08□□□□□ -1.12
NR1I3-208ENST00000412844 CCDC129Q6ZRS4 1044 aa8.08□□□□□ -1.12
NR1I3-208ENST00000412844 USP38Q8NB14 1042 aa8.08□□□□□ -1.12
NR1I3-208ENST00000412844 GATAD2BQ8WXI9 593 aa8.08□□□□□ -1.12
NR1I3-208ENST00000412844 HERVK_113Q902F9 699 aa8.08□□□□□ -1.12
NR1I3-208ENST00000412844 UTP4Q969X6 686 aaKnown RBP8.08□□□□□ -1.12
NR1I3-208ENST00000412844 FERMT2Q96AC1 680 aa8.08□□□□□ -1.12
NR1I3-208ENST00000412844 MEIS3Q99687 375 aa8.08□□□□□ -1.12
NR1I3-208ENST00000412844 YIPF2Q9BWQ6 316 aa8.08□□□□□ -1.12
NR1I3-208ENST00000412844 SLC28A3Q9HAS3 691 aa8.08□□□□□ -1.12
NR1I3-208ENST00000412844 IGSF5Q9NSI5 407 aa8.08□□□□□ -1.12
NR1I3-208ENST00000412844 ADAMTS1Q9UHI8 967 aa8.08□□□□□ -1.12
NR1I3-208ENST00000412844 SAP30BPQ9UHR5 308 aaKnown RBP8.08□□□□□ -1.12
NR1I3-208ENST00000412844 TBX21Q9UL17 535 aa8.08□□□□□ -1.12
NR1I3-208ENST00000412844 DUSP11O75319 330 aaKnown RBP8.07□□□□□ -1.12
NR1I3-208ENST00000412844 FLOT1O75955 427 aa8.07□□□□□ -1.12
NR1I3-208ENST00000412844 F13A1P00488 732 aa8.07□□□□□ -1.12
NR1I3-208ENST00000412844 GSK3AP49840 483 aa8.07□□□□□ -1.12
NR1I3-208ENST00000412844 RACK1P63244 317 aaKnown RBP8.07□□□□□ -1.12
NR1I3-208ENST00000412844 RPL6Q02878 288 aaKnown RBP8.07□□□□□ -1.12
NR1I3-208ENST00000412844 PTPN11Q06124 597 aaPredicted RBP8.07□□□□□ -1.12
NR1I3-208ENST00000412844 GNL2Q13823 731 aaKnown RBP8.07□□□□□ -1.12
NR1I3-208ENST00000412844 PLS1Q14651 629 aa8.07□□□□□ -1.12
NR1I3-208ENST00000412844 TTF1Q15361 905 aaPredicted RBP8.07□□□□□ -1.12
NR1I3-208ENST00000412844 TNNI3KQ59H18 835 aa8.07□□□□□ -1.12
NR1I3-208ENST00000412844 WIPI1Q5MNZ9 446 aaPredicted RBP8.07□□□□□ -1.12
NR1I3-208ENST00000412844 BNC2Q6ZN30 1099 aaPredicted RBP8.07□□□□□ -1.12
NR1I3-208ENST00000412844 RIOX2Q8IUF8 465 aa8.07□□□□□ -1.12
NR1I3-208ENST00000412844 ACER1Q8TDN7 264 aa8.07□□□□□ -1.12
NR1I3-208ENST00000412844 CCDC17Q96LX7 622 aa8.07□□□□□ -1.12
NR1I3-208ENST00000412844 MMP19Q99542 508 aa8.07□□□□□ -1.12
NR1I3-208ENST00000412844 CRIM1Q9NZV1 1036 aa8.07□□□□□ -1.12
NR1I3-208ENST00000412844 FAM184BQ9ULE4 1060 aa8.07□□□□□ -1.12
NR1I3-208ENST00000412844 NOB1Q9ULX3 412 aaKnown RBP8.07□□□□□ -1.12
NR1I3-208ENST00000412844 COG5Q9UP83 839 aa8.07□□□□□ -1.12
NR1I3-208ENST00000412844 FPGT-TNNI3KV9GXZ4 949 aa8.07□□□□□ -1.12
NR1I3-208ENST00000412844 SMCHD1A6NHR9 2005 aa8.07□□□□□ -1.12
NR1I3-208ENST00000412844 A0A0U1RQG5 324 aaPredicted RBP8.06□□□□□ -1.12
NR1I3-208ENST00000412844 TMPRSS2O15393 492 aa8.06□□□□□ -1.12
NR1I3-208ENST00000412844 ADAMTS4O75173 837 aa8.06□□□□□ -1.12
NR1I3-208ENST00000412844 CABYRO75952 493 aa8.06□□□□□ -1.12
NR1I3-208ENST00000412844 PGK1P00558 417 aa8.06□□□□□ -1.12
NR1I3-208ENST00000412844 PFKMP08237 780 aa8.06□□□□□ -1.12
NR1I3-208ENST00000412844 ITGB8P26012 769 aa8.06□□□□□ -1.12
NR1I3-208ENST00000412844 SHMT1P34896 483 aa8.06□□□□□ -1.12
NR1I3-208ENST00000412844 ASPAP45381 313 aa8.06□□□□□ -1.12
NR1I3-208ENST00000412844 EPHB4P54760 987 aa8.06□□□□□ -1.12
NR1I3-208ENST00000412844 GABPAQ06546 454 aa8.06□□□□□ -1.12
NR1I3-208ENST00000412844 APOBRQ0VD83 1088 aa8.06□□□□□ -1.12
NR1I3-208ENST00000412844 OS9Q13438 667 aaPredicted RBP8.06□□□□□ -1.12
NR1I3-208ENST00000412844 ZC3H12AQ5D1E8 599 aaKnown RBP8.06□□□□□ -1.12
NR1I3-208ENST00000412844 TMEM240Q5SV17 173 aa8.06□□□□□ -1.12
NR1I3-208ENST00000412844 ANO1Q5XXA6 986 aa8.06□□□□□ -1.12
NR1I3-208ENST00000412844 MAMDC4Q6UXC1 1216 aa8.06□□□□□ -1.12
NR1I3-208ENST00000412844 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.06□□□□□ -1.12
NR1I3-208ENST00000412844 ADGRA1Q86SQ6 560 aa8.06□□□□□ -1.12
NR1I3-208ENST00000412844 AMOTL1Q8IY63 956 aa8.06□□□□□ -1.12
NR1I3-208ENST00000412844 MAGEB6Q8N7X4 407 aa8.06□□□□□ -1.12
NR1I3-208ENST00000412844 C2CD4AQ8NCU7 369 aaPredicted RBP8.06□□□□□ -1.12
NR1I3-208ENST00000412844 KLHDC9Q8NEP7 349 aa8.06□□□□□ -1.12
NR1I3-208ENST00000412844 PLPPR2Q96GM1 343 aa8.06□□□□□ -1.12
NR1I3-208ENST00000412844 MEGF10Q96KG7 1140 aa8.06□□□□□ -1.12
NR1I3-208ENST00000412844 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.06□□□□□ -1.12
NR1I3-208ENST00000412844 CRNKL1Q9BZJ0 848 aaKnown RBP8.06□□□□□ -1.12
NR1I3-208ENST00000412844 PRDM12Q9H4Q4 367 aa8.06□□□□□ -1.12
NR1I3-208ENST00000412844 VCPKMTQ9H867 229 aa8.06□□□□□ -1.12
NR1I3-208ENST00000412844 PPP1R9AQ9ULJ8 1098 aa8.06□□□□□ -1.12
NR1I3-208ENST00000412844 ADAMTS5Q9UNA0 930 aa8.06□□□□□ -1.12
NR1I3-208ENST00000412844 INPP5FQ9Y2H2 1132 aa8.06□□□□□ -1.12
NR1I3-208ENST00000412844 HIF3AQ9Y2N7 669 aa8.06□□□□□ -1.12
NR1I3-208ENST00000412844 TMX2Q9Y320 296 aa8.06□□□□□ -1.12
NR1I3-208ENST00000412844 PCDHGC5Q9Y5F6 944 aa8.06□□□□□ -1.12
NR1I3-208ENST00000412844 CHD9Q3L8U1 2897 aa8.06□□□□□ -1.12
NR1I3-208ENST00000412844 SYNRGQ9UMZ2 1314 aa8.05□□□□□ -1.12
NR1I3-208ENST00000412844 ZNFX1Q9P2E3 1918 aaKnown RBP8.05□□□□□ -1.12
NR1I3-208ENST00000412844 PRAMEF27A3QJZ7 478 aa8.05□□□□□ -1.12
NR1I3-208ENST00000412844 ARVCFO00192 962 aa8.05□□□□□ -1.12
NR1I3-208ENST00000412844 MPHOSPH10O00566 681 aaKnown RBP8.05□□□□□ -1.12
NR1I3-208ENST00000412844 ERC2O15083 957 aa8.05□□□□□ -1.12
NR1I3-208ENST00000412844 DHX15O43143 795 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms