RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 ARL13BQ3SXY8 428 aa18.12■□□□□ 0.49
PCDHA13-202ENST00000409494 MOXD1Q6UVY6 613 aa18.12■□□□□ 0.49
PCDHA13-202ENST00000409494 BANK1Q8NDB2 785 aa18.12■□□□□ 0.49
PCDHA13-202ENST00000409494 FAM71BQ8TC56 605 aa18.12■□□□□ 0.49
PCDHA13-202ENST00000409494 TRIM31Q9BZY9 425 aa18.12■□□□□ 0.49
PCDHA13-202ENST00000409494 MTIF3Q9H2K0 278 aaKnown RBP18.12■□□□□ 0.49
PCDHA13-202ENST00000409494 DDX41Q9UJV9 622 aaKnown RBP18.12■□□□□ 0.49
PCDHA13-202ENST00000409494 DENND3A2RUS2 1198 aa18.11■□□□□ 0.49
PCDHA13-202ENST00000409494 MUTP22033 750 aa18.11■□□□□ 0.49
PCDHA13-202ENST00000409494 CAP2P40123 477 aa18.11■□□□□ 0.49
PCDHA13-202ENST00000409494 ADCY8P40145 1251 aa18.11■□□□□ 0.49
PCDHA13-202ENST00000409494 BAATQ14032 418 aaPredicted RBP18.11■□□□□ 0.49
PCDHA13-202ENST00000409494 RAET1EQ8TD07 263 aa18.11■□□□□ 0.49
PCDHA13-202ENST00000409494 TRIM62Q9BVG3 475 aa18.11■□□□□ 0.49
PCDHA13-202ENST00000409494 STRIP2Q9ULQ0 834 aa18.11■□□□□ 0.49
PCDHA13-202ENST00000409494 UBR1Q8IWV7 1749 aa18.11■□□□□ 0.49
PCDHA13-202ENST00000409494 POTEB3A0JP26 581 aa18.11■□□□□ 0.49
PCDHA13-202ENST00000409494 POTECB2RU33 542 aa18.11■□□□□ 0.49
PCDHA13-202ENST00000409494 CRCPO75575 148 aa18.11■□□□□ 0.49
PCDHA13-202ENST00000409494 POTEBQ6S5H4 581 aa18.11■□□□□ 0.49
PCDHA13-202ENST00000409494 MRIQ9BWK5 157 aa18.11■□□□□ 0.49
PCDHA13-202ENST00000409494 GOLPH3LQ9H4A5 285 aa18.11■□□□□ 0.49
PCDHA13-202ENST00000409494 ZNF148Q9UQR1 794 aa18.11■□□□□ 0.49
PCDHA13-202ENST00000409494 E9PMD0 336 aa18.11■□□□□ 0.49
PCDHA13-202ENST00000409494 POLRMTO00411 1230 aaKnown RBP18.11■□□□□ 0.49
PCDHA13-202ENST00000409494 PDXKO00764 312 aa18.11■□□□□ 0.49
PCDHA13-202ENST00000409494 GAS2O43903 313 aaKnown RBP18.11■□□□□ 0.49
PCDHA13-202ENST00000409494 SEC31AO94979 1220 aaKnown RBP18.11■□□□□ 0.49
PCDHA13-202ENST00000409494 KRT31Q15323 416 aa18.11■□□□□ 0.49
PCDHA13-202ENST00000409494 TWF2Q6IBS0 349 aaKnown RBP18.11■□□□□ 0.49
PCDHA13-202ENST00000409494 C15orf52Q6ZUT6 534 aaKnown RBP18.11■□□□□ 0.49
PCDHA13-202ENST00000409494 RNF139Q8WU17 664 aa18.11■□□□□ 0.49
PCDHA13-202ENST00000409494 FAM163AQ96GL9 167 aaPredicted RBP18.11■□□□□ 0.49
PCDHA13-202ENST00000409494 RABEP2Q9H5N1 569 aa18.11■□□□□ 0.49
PCDHA13-202ENST00000409494 SLC38A10Q9HBR0 1119 aa18.11■□□□□ 0.49
PCDHA13-202ENST00000409494 PDE11AQ9HCR9 933 aa18.11■□□□□ 0.49
PCDHA13-202ENST00000409494 SPDYE2BA6NHP3 402 aa18.11■□□□□ 0.49
PCDHA13-202ENST00000409494 HUS1O60921 280 aa18.11■□□□□ 0.49
PCDHA13-202ENST00000409494 SPDYE6P0CI01 402 aa18.11■□□□□ 0.49
PCDHA13-202ENST00000409494 KAZALD1Q96I82 304 aa18.11■□□□□ 0.49
PCDHA13-202ENST00000409494 CCDC151A5D8V7 595 aa18.1■□□□□ 0.49
PCDHA13-202ENST00000409494 FBXO38Q6PIJ6 1188 aa18.1■□□□□ 0.49
PCDHA13-202ENST00000409494 THNSL1Q8IYQ7 743 aa18.1■□□□□ 0.49
PCDHA13-202ENST00000409494 KCNB2Q92953 911 aa18.1■□□□□ 0.49
PCDHA13-202ENST00000409494 FAM114A2Q9NRY5 505 aa18.1■□□□□ 0.49
PCDHA13-202ENST00000409494 SYNPO2Q9UMS6 1093 aa18.1■□□□□ 0.49
PCDHA13-202ENST00000409494 TDP2O95551 362 aa18.1■□□□□ 0.49
PCDHA13-202ENST00000409494 CLCN6P51797 869 aa18.1■□□□□ 0.49
PCDHA13-202ENST00000409494 RASSF7Q02833 373 aa18.1■□□□□ 0.49
PCDHA13-202ENST00000409494 MESDQ14696 234 aa18.1■□□□□ 0.49
PCDHA13-202ENST00000409494 HHATQ5VTY9 493 aa18.1■□□□□ 0.49
PCDHA13-202ENST00000409494 TRIM72Q6ZMU5 477 aa18.1■□□□□ 0.49
PCDHA13-202ENST00000409494 CDKL2Q92772 493 aa18.1■□□□□ 0.49
PCDHA13-202ENST00000409494 CPSF3Q9UKF6 684 aaKnown RBP18.1■□□□□ 0.49
PCDHA13-202ENST00000409494 GPC3P51654 580 aa18.1■□□□□ 0.49
PCDHA13-202ENST00000409494 ZNF560Q96MR9 790 aa18.1■□□□□ 0.49
PCDHA13-202ENST00000409494 CCL15-CCL14A0A0B4J2E2 113 aa18.1■□□□□ 0.49
PCDHA13-202ENST00000409494 ADGRB2O60241 1585 aa18.1■□□□□ 0.49
PCDHA13-202ENST00000409494 ATF2P15336 505 aa18.1■□□□□ 0.49
PCDHA13-202ENST00000409494 CCL15Q16663 113 aa18.1■□□□□ 0.49
PCDHA13-202ENST00000409494 DPF2Q92785 391 aa18.1■□□□□ 0.49
PCDHA13-202ENST00000409494 GPRASP2Q96D09 838 aa18.1■□□□□ 0.49
PCDHA13-202ENST00000409494 HVCN1Q96D96 273 aa18.1■□□□□ 0.49
PCDHA13-202ENST00000409494 KRT12Q99456 494 aa18.1■□□□□ 0.49
PCDHA13-202ENST00000409494 GJB4Q9NTQ9 266 aa18.1■□□□□ 0.49
PCDHA13-202ENST00000409494 UBE4BO95155 1302 aa18.1■□□□□ 0.49
PCDHA13-202ENST00000409494 GMNNO75496 209 aa18.09■□□□□ 0.49
PCDHA13-202ENST00000409494 ARHGAP25P42331 645 aa18.09■□□□□ 0.49
PCDHA13-202ENST00000409494 KRT15P19012 456 aa18.09■□□□□ 0.49
PCDHA13-202ENST00000409494 TTBK2Q6IQ55 1244 aa18.09■□□□□ 0.49
PCDHA13-202ENST00000409494 POLR3FQ9H1D9 316 aaPredicted RBP18.09■□□□□ 0.49
PCDHA13-202ENST00000409494 PXDNQ92626 1479 aa18.09■□□□□ 0.49
PCDHA13-202ENST00000409494 GFPT2O94808 682 aa18.09■□□□□ 0.49
PCDHA13-202ENST00000409494 VIMP08670 466 aaKnown RBP18.09■□□□□ 0.49
PCDHA13-202ENST00000409494 HUNKP57058 714 aa18.09■□□□□ 0.49
PCDHA13-202ENST00000409494 TSPY1Q01534 308 aa18.09■□□□□ 0.49
PCDHA13-202ENST00000409494 CCDC144BQ3MJ40 725 aa18.09■□□□□ 0.49
PCDHA13-202ENST00000409494 KRT39Q6A163 491 aa18.09■□□□□ 0.49
PCDHA13-202ENST00000409494 FRMD5Q7Z6J6 570 aa18.09■□□□□ 0.49
PCDHA13-202ENST00000409494 EFCAB13Q8IY85 973 aa18.09■□□□□ 0.49
PCDHA13-202ENST00000409494 OR6J1Q8NGC5 347 aa18.09■□□□□ 0.49
PCDHA13-202ENST00000409494 GMCL1Q96IK5 515 aa18.09■□□□□ 0.49
PCDHA13-202ENST00000409494 VPS37BQ9H9H4 285 aa18.09■□□□□ 0.49
PCDHA13-202ENST00000409494 GPBP1L1Q9HC44 474 aaPredicted RBP18.09■□□□□ 0.49
PCDHA13-202ENST00000409494 MIF4GDA9UHW6 222 aaKnown RBP18.09■□□□□ 0.49
PCDHA13-202ENST00000409494 F8W8V4 182 aa18.09■□□□□ 0.49
PCDHA13-202ENST00000409494 H7C0C1 242 aa18.09■□□□□ 0.49
PCDHA13-202ENST00000409494 BUB1O43683 1085 aa18.09■□□□□ 0.49
PCDHA13-202ENST00000409494 CALB1P05937 261 aa18.09■□□□□ 0.49
PCDHA13-202ENST00000409494 ATP5OP48047 213 aa18.09■□□□□ 0.49
PCDHA13-202ENST00000409494 CASP7P55210 303 aa18.09■□□□□ 0.49
PCDHA13-202ENST00000409494 ERICH1Q86X53 443 aa18.09■□□□□ 0.49
PCDHA13-202ENST00000409494 NME8Q8N427 588 aa18.09■□□□□ 0.49
PCDHA13-202ENST00000409494 HEXIM2Q96MH2 286 aaKnown RBP18.09■□□□□ 0.49
PCDHA13-202ENST00000409494 TBC1D8O95759 1140 aa18.08■□□□□ 0.49
PCDHA13-202ENST00000409494 MUM1L1Q5H9M0 696 aa18.08■□□□□ 0.49
PCDHA13-202ENST00000409494 ELOA2Q8IYF1 753 aaPredicted RBP18.08■□□□□ 0.49
PCDHA13-202ENST00000409494 ANKEF1Q9NU02 776 aa18.08■□□□□ 0.49
PCDHA13-202ENST00000409494 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.08■□□□□ 0.48
PCDHA13-202ENST00000409494 RRN3P2A6NIE6 340 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms