RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 KLC1Q07866 573 aa3.94□□□□□ -1.78
XRCC4-203ENST00000396027 SLFN5Q08AF3 891 aa3.94□□□□□ -1.78
XRCC4-203ENST00000396027 FAM69CQ0P6D2 419 aa3.94□□□□□ -1.78
XRCC4-203ENST00000396027 CBX3Q13185 183 aa3.94□□□□□ -1.78
XRCC4-203ENST00000396027 NMIQ13287 307 aaPredicted RBP3.94□□□□□ -1.78
XRCC4-203ENST00000396027 SAFBQ15424 915 aaKnown RBP eCLIP3.94□□□□□ -1.78
XRCC4-203ENST00000396027 GSTA3Q16772 222 aa3.94□□□□□ -1.78
XRCC4-203ENST00000396027 PABPC1LQ4VXU2 614 aaKnown RBP3.94□□□□□ -1.78
XRCC4-203ENST00000396027 ZCWPW2Q504Y3 356 aa3.94□□□□□ -1.78
XRCC4-203ENST00000396027 LACTB2Q53H82 288 aaPredicted RBP3.94□□□□□ -1.78
XRCC4-203ENST00000396027 HSP90AA5PQ58FG0 334 aa3.94□□□□□ -1.78
XRCC4-203ENST00000396027 BEND6Q5SZJ8 279 aaPredicted RBP3.94□□□□□ -1.78
XRCC4-203ENST00000396027 C20orf194Q5TEA3 1177 aa3.94□□□□□ -1.78
XRCC4-203ENST00000396027 INTS3Q68E01 1043 aaKnown RBP3.94□□□□□ -1.78
XRCC4-203ENST00000396027 FCRLBQ6BAA4 426 aa3.94□□□□□ -1.78
XRCC4-203ENST00000396027 UNC13DQ70J99 1090 aa3.94□□□□□ -1.78
XRCC4-203ENST00000396027 RSRC2Q7L4I2 434 aaKnown RBP3.94□□□□□ -1.78
XRCC4-203ENST00000396027 NANOGNBQ7Z5D8 188 aa3.94□□□□□ -1.78
XRCC4-203ENST00000396027 ZNF554Q86TJ5 538 aa3.94□□□□□ -1.78
XRCC4-203ENST00000396027 HOOK3Q86VS8 718 aa3.94□□□□□ -1.78
XRCC4-203ENST00000396027 FUKQ8N0W3 1084 aa3.94□□□□□ -1.78
XRCC4-203ENST00000396027 TMEM57Q8N5G2 664 aa3.94□□□□□ -1.78
XRCC4-203ENST00000396027 ATRIPQ8WXE1 791 aa3.94□□□□□ -1.78
XRCC4-203ENST00000396027 TAF4BQ92750 862 aa3.94□□□□□ -1.78
XRCC4-203ENST00000396027 DPF3Q92784 378 aa3.94□□□□□ -1.78
XRCC4-203ENST00000396027 RUNDC1Q96C34 613 aa3.94□□□□□ -1.78
XRCC4-203ENST00000396027 IL17RAQ96F46 866 aa3.94□□□□□ -1.78
XRCC4-203ENST00000396027 VMP1Q96GC9 406 aa3.94□□□□□ -1.78
XRCC4-203ENST00000396027 IFT74Q96LB3 600 aa3.94□□□□□ -1.78
XRCC4-203ENST00000396027 HNRNPABQ99729 332 aaKnown RBP3.94□□□□□ -1.78
XRCC4-203ENST00000396027 NUF2Q9BZD4 464 aa3.94□□□□□ -1.78
XRCC4-203ENST00000396027 SCAND2PQ9GZW5 306 aaPredicted RBP3.94□□□□□ -1.78
XRCC4-203ENST00000396027 NSRP1Q9H0G5 558 aaKnown RBP3.94□□□□□ -1.78
XRCC4-203ENST00000396027 FAM204AQ9H8W3 233 aa3.94□□□□□ -1.78
XRCC4-203ENST00000396027 ANO2Q9NQ90 1003 aa3.94□□□□□ -1.78
XRCC4-203ENST00000396027 DCAF16Q9NXF7 216 aa3.94□□□□□ -1.78
XRCC4-203ENST00000396027 THEGQ9P2T0 379 aa3.94□□□□□ -1.78
XRCC4-203ENST00000396027 SCOCQ9UIL1 159 aa3.94□□□□□ -1.78
XRCC4-203ENST00000396027 ZMIZ1Q9ULJ6 1067 aa3.94□□□□□ -1.78
XRCC4-203ENST00000396027 PYCARDQ9ULZ3 195 aa3.94□□□□□ -1.78
XRCC4-203ENST00000396027 RRP7AQ9Y3A4 280 aaKnown RBP3.94□□□□□ -1.78
XRCC4-203ENST00000396027 ASB3Q9Y575 518 aa3.94□□□□□ -1.78
XRCC4-203ENST00000396027 N6AMT1Q9Y5N5 214 aa3.94□□□□□ -1.78
XRCC4-203ENST00000396027 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.94□□□□□ -1.78
XRCC4-203ENST00000396027 KIF14Q15058 1648 aa3.94□□□□□ -1.78
XRCC4-203ENST00000396027 ZNF521Q96K83 1311 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 RPRD2Q5VT52 1461 aaKnown RBP3.93□□□□□ -1.78
XRCC4-203ENST00000396027 CCDC141Q6ZP82 1450 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 KIF24Q5T7B8 1368 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 OPLAHO14841 1288 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 HGSO14964 777 aaPredicted RBP3.93□□□□□ -1.78
XRCC4-203ENST00000396027 XPO1O14980 1071 aaKnown RBP3.93□□□□□ -1.78
XRCC4-203ENST00000396027 AREL1O15033 823 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 ARHGAP6O43182 974 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 XPOTO43592 962 aaKnown RBP3.93□□□□□ -1.78
XRCC4-203ENST00000396027 RAB11FIP3O75154 756 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 CDC45O75419 566 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 MBD4O95243 580 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 RAPGEF3O95398 923 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 MAP4K4O95819 1239 aaPredicted RBP3.93□□□□□ -1.78
XRCC4-203ENST00000396027 MYZAPP0CAP1 466 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 HSPA8P11142 646 aaKnown RBP3.93□□□□□ -1.78
XRCC4-203ENST00000396027 GNAT1P11488 350 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 RXRAP19793 462 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 GBP1P32455 592 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 HOXD12P35452 270 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 HSPA9P38646 679 aaKnown RBP3.93□□□□□ -1.78
XRCC4-203ENST00000396027 EPS15P42566 896 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 MXRA7P84157 204 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 ITIH3Q06033 890 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 MAP3K12Q12852 859 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 HYAL2Q12891 473 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 STK4Q13043 487 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 CUL4AQ13619 759 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 ITGA9Q13797 1035 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 MAPRE2Q15555 327 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 DDB1Q16531 1140 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 BCL2A1Q16548 175 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 FXNQ16595 210 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 COX20Q5RI15 118 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 THEMIS2Q5TEJ8 643 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 EFCAB2Q5VUJ9 269 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 FBXW10Q5XX13 1052 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 ATL3Q6DD88 541 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 NEPROQ6NW34 567 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 PRPF40BQ6NWY9 871 aaKnown RBP3.93□□□□□ -1.78
XRCC4-203ENST00000396027 OGFOD3Q6PK18 319 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 BEND5Q7L4P6 421 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 CROCCP2Q86T23 111 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 ANKRD44Q8N8A2 993 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 C2CD4AQ8NCU7 369 aaPredicted RBP3.93□□□□□ -1.78
XRCC4-203ENST00000396027 BBOF1Q8ND07 529 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 CCDC148Q8NFR7 591 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.93□□□□□ -1.78
XRCC4-203ENST00000396027 BRSK1Q8TDC3 778 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 DQX1Q8TE96 717 aaKnown RBP3.93□□□□□ -1.78
XRCC4-203ENST00000396027 WDR60Q8WVS4 1066 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 ATL1Q8WXF7 558 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 KAT2BQ92831 832 aa3.93□□□□□ -1.78
XRCC4-203ENST00000396027 HIC2Q96JB3 615 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms