RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 CCDC62Q6P9F0 684 aa4.16□□□□□ -1.74
PTPRC-205ENST00000391970 UNQ6494/PRO21346Q6UXR6 183 aa4.16□□□□□ -1.74
PTPRC-205ENST00000391970 TTLL7Q6ZT98 887 aa4.16□□□□□ -1.74
PTPRC-205ENST00000391970 KCNK18Q7Z418 384 aa4.16□□□□□ -1.74
PTPRC-205ENST00000391970 PNMA8AQ86V59 439 aaPredicted RBP4.16□□□□□ -1.74
PTPRC-205ENST00000391970 IGDCC3Q8IVU1 814 aa4.16□□□□□ -1.74
PTPRC-205ENST00000391970 CHPFQ8IZ52 775 aa4.16□□□□□ -1.74
PTPRC-205ENST00000391970 CPA6Q8N4T0 437 aa4.16□□□□□ -1.74
PTPRC-205ENST00000391970 EAF2Q96CJ1 260 aaPredicted RBP4.16□□□□□ -1.74
PTPRC-205ENST00000391970 BTBD2Q9BX70 525 aa4.16□□□□□ -1.74
PTPRC-205ENST00000391970 KCNK12Q9HB15 430 aa4.16□□□□□ -1.74
PTPRC-205ENST00000391970 ZNF277Q9NRM2 450 aaPredicted RBP4.16□□□□□ -1.74
PTPRC-205ENST00000391970 DNAJC28Q9NX36 388 aa4.16□□□□□ -1.74
PTPRC-205ENST00000391970 ARHGAP20Q9P2F6 1191 aa4.16□□□□□ -1.74
PTPRC-205ENST00000391970 IP6K2Q9UHH9 426 aa4.16□□□□□ -1.74
PTPRC-205ENST00000391970 ZNF180Q9UJW8 692 aa4.16□□□□□ -1.74
PTPRC-205ENST00000391970 TMPRSS11EQ9UL52 423 aa4.16□□□□□ -1.74
PTPRC-205ENST00000391970 FAN1Q9Y2M0 1017 aa4.16□□□□□ -1.74
PTPRC-205ENST00000391970 MRFAP1Q9Y605 127 aa4.16□□□□□ -1.74
PTPRC-205ENST00000391970 KLHL33A6NCF5 533 aa4.15□□□□□ -1.75
PTPRC-205ENST00000391970 LRRC10BA6NIK2 292 aa4.15□□□□□ -1.75
PTPRC-205ENST00000391970 N4BP3O15049 544 aa4.15□□□□□ -1.75
PTPRC-205ENST00000391970 XPOTO43592 962 aaKnown RBP4.15□□□□□ -1.75
PTPRC-205ENST00000391970 MAFO75444 373 aaPredicted RBP4.15□□□□□ -1.75
PTPRC-205ENST00000391970 RFPL1O75677 317 aa4.15□□□□□ -1.75
PTPRC-205ENST00000391970 IL18BPO95998 194 aa4.15□□□□□ -1.75
PTPRC-205ENST00000391970 PFKMP08237 780 aa4.15□□□□□ -1.75
PTPRC-205ENST00000391970 ZSCAN20P17040 1043 aaPredicted RBP4.15□□□□□ -1.75
PTPRC-205ENST00000391970 AGXTP21549 392 aa4.15□□□□□ -1.75
PTPRC-205ENST00000391970 BCAR1P56945 870 aa4.15□□□□□ -1.75
PTPRC-205ENST00000391970 IL13RA1P78552 427 aa4.15□□□□□ -1.75
PTPRC-205ENST00000391970 ADAM9Q13443 819 aa4.15□□□□□ -1.75
PTPRC-205ENST00000391970 NOLC1Q14978 699 aaKnown RBP eCLIP4.15□□□□□ -1.75
PTPRC-205ENST00000391970 RTP5Q14D33 572 aa4.15□□□□□ -1.75
PTPRC-205ENST00000391970 CLUL1Q15846 466 aa4.15□□□□□ -1.75
PTPRC-205ENST00000391970 TOR2AQ5JU69 321 aa4.15□□□□□ -1.75
PTPRC-205ENST00000391970 KANK2Q63ZY3 851 aa4.15□□□□□ -1.75
PTPRC-205ENST00000391970 NXNQ6DKJ4 435 aa4.15□□□□□ -1.75
PTPRC-205ENST00000391970 TMEM132EQ6IEE7 984 aa4.15□□□□□ -1.75
PTPRC-205ENST00000391970 NOL8Q76FK4 1167 aaKnown RBP4.15□□□□□ -1.75
PTPRC-205ENST00000391970 LYSMD2Q8IV50 215 aa4.15□□□□□ -1.75
PTPRC-205ENST00000391970 CMTR2Q8IYT2 770 aaKnown RBP4.15□□□□□ -1.75
PTPRC-205ENST00000391970 JPH3Q8WXH2 748 aaPredicted RBP4.15□□□□□ -1.75
PTPRC-205ENST00000391970 SSH1Q8WYL5 1049 aa4.15□□□□□ -1.75
PTPRC-205ENST00000391970 RPGRQ92834 1020 aaKnown RBP4.15□□□□□ -1.75
PTPRC-205ENST00000391970 RAX2Q96IS3 184 aa4.15□□□□□ -1.75
PTPRC-205ENST00000391970 C8orf48Q96LL4 319 aa4.15□□□□□ -1.75
PTPRC-205ENST00000391970 GORASP1Q9BQQ3 440 aa4.15□□□□□ -1.75
PTPRC-205ENST00000391970 SGPP1Q9BX95 441 aa4.15□□□□□ -1.75
PTPRC-205ENST00000391970 PITHD1Q9GZP4 211 aaPredicted RBP4.15□□□□□ -1.75
PTPRC-205ENST00000391970 QRSL1Q9H0R6 528 aaKnown RBP4.15□□□□□ -1.75
PTPRC-205ENST00000391970 OR10A5Q9H207 317 aa4.15□□□□□ -1.75
PTPRC-205ENST00000391970 KCTD10Q9H3F6 313 aa4.15□□□□□ -1.75
PTPRC-205ENST00000391970 MTG2Q9H4K7 406 aa4.15□□□□□ -1.75
PTPRC-205ENST00000391970 PRDM12Q9H4Q4 367 aa4.15□□□□□ -1.75
PTPRC-205ENST00000391970 GCM1Q9NP62 436 aa4.15□□□□□ -1.75
PTPRC-205ENST00000391970 KCND1Q9NSA2 647 aa4.15□□□□□ -1.75
PTPRC-205ENST00000391970 ZFP69BQ9UJL9 534 aa4.15□□□□□ -1.75
PTPRC-205ENST00000391970 DENND2AQ9ULE3 1009 aa4.15□□□□□ -1.75
PTPRC-205ENST00000391970 EDARQ9UNE0 448 aa4.15□□□□□ -1.75
PTPRC-205ENST00000391970 GPR45Q9Y5Y3 372 aa4.15□□□□□ -1.75
PTPRC-205ENST00000391970 NUMBLQ9Y6R0 609 aa4.15□□□□□ -1.75
PTPRC-205ENST00000391970 ZRANB2O95218 330 aaKnown RBP eCLIP4.14□□□□□ -1.75
PTPRC-205ENST00000391970 LPLP06858 475 aa4.14□□□□□ -1.75
PTPRC-205ENST00000391970 MTHFD2P13995 350 aa4.14□□□□□ -1.75
PTPRC-205ENST00000391970 APEX1P27695 318 aaKnown RBP4.14□□□□□ -1.75
PTPRC-205ENST00000391970 GLRBP48167 497 aa4.14□□□□□ -1.75
PTPRC-205ENST00000391970 MRPS9P82933 396 aaKnown RBP4.14□□□□□ -1.75
PTPRC-205ENST00000391970 FOXO4P98177 505 aa4.14□□□□□ -1.75
PTPRC-205ENST00000391970 NFATC3Q12968 1075 aa4.14□□□□□ -1.75
PTPRC-205ENST00000391970 TRIM25Q14258 630 aaKnown RBP4.14□□□□□ -1.75
PTPRC-205ENST00000391970 PHF19Q5T6S3 580 aa4.14□□□□□ -1.75
PTPRC-205ENST00000391970 FAM102BQ5T8I3 360 aa4.14□□□□□ -1.75
PTPRC-205ENST00000391970 EFCAB2Q5VUJ9 269 aa4.14□□□□□ -1.75
PTPRC-205ENST00000391970 STK32CQ86UX6 486 aa4.14□□□□□ -1.75
PTPRC-205ENST00000391970 SLC41A1Q8IVJ1 513 aa4.14□□□□□ -1.75
PTPRC-205ENST00000391970 WDR75Q8IWA0 830 aaKnown RBP4.14□□□□□ -1.75
PTPRC-205ENST00000391970 TCEAL8Q8IYN2 117 aa4.14□□□□□ -1.75
PTPRC-205ENST00000391970 LINC00482Q8N8I6 264 aa4.14□□□□□ -1.75
PTPRC-205ENST00000391970 KYQ8NBH2 561 aa4.14□□□□□ -1.75
PTPRC-205ENST00000391970 FBXO15Q8NCQ5 510 aaPredicted RBP4.14□□□□□ -1.75
PTPRC-205ENST00000391970 RSAD2Q8WXG1 361 aa4.14□□□□□ -1.75
PTPRC-205ENST00000391970 AUTS2Q8WXX7 1259 aa4.14□□□□□ -1.75
PTPRC-205ENST00000391970 JADE3Q92613 823 aa4.14□□□□□ -1.75
PTPRC-205ENST00000391970 TEKT5Q96M29 485 aa4.14□□□□□ -1.75
PTPRC-205ENST00000391970 ZSWIM3Q96MP5 696 aa4.14□□□□□ -1.75
PTPRC-205ENST00000391970 CLIC6Q96NY7 704 aa4.14□□□□□ -1.75
PTPRC-205ENST00000391970 NOX5Q96PH1 765 aa4.14□□□□□ -1.75
PTPRC-205ENST00000391970 WRNIP1Q96S55 665 aa4.14□□□□□ -1.75
PTPRC-205ENST00000391970 TACO1Q9BSH4 297 aaKnown RBP4.14□□□□□ -1.75
PTPRC-205ENST00000391970 C11orf84Q9BUA3 381 aaPredicted RBP4.14□□□□□ -1.75
PTPRC-205ENST00000391970 INVSQ9Y283 1065 aa4.14□□□□□ -1.75
PTPRC-205ENST00000391970 ANKRD6Q9Y2G4 727 aa4.14□□□□□ -1.75
PTPRC-205ENST00000391970 GIT1Q9Y2X7 761 aa4.14□□□□□ -1.75
PTPRC-205ENST00000391970 MYPNQ86TC9 1320 aa4.14□□□□□ -1.75
PTPRC-205ENST00000391970 A0A0A6YYJ9 748 aa4.13□□□□□ -1.75
PTPRC-205ENST00000391970 PRPF3O43395 683 aaKnown RBP4.13□□□□□ -1.75
PTPRC-205ENST00000391970 OPHN1O60890 802 aa4.13□□□□□ -1.75
PTPRC-205ENST00000391970 PCDH8O95206 1070 aa4.13□□□□□ -1.75
PTPRC-205ENST00000391970 CELA3BP08861 270 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms