RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 AGBL1Q96MI9 1066 aa9.16□□□□□ -0.94
PTPRK-206ENST00000368215 MTRQ99707 1265 aa9.16□□□□□ -0.94
PTPRK-206ENST00000368215 DNAJC17Q9NVM6 304 aaKnown RBP9.16□□□□□ -0.94
PTPRK-206ENST00000368215 ARHGAP20Q9P2F6 1191 aa9.16□□□□□ -0.94
PTPRK-206ENST00000368215 MAPK4P31152 587 aa9.16□□□□□ -0.94
PTPRK-206ENST00000368215 CASP4P49662 377 aa9.16□□□□□ -0.94
PTPRK-206ENST00000368215 OSTNP61366 133 aa9.16□□□□□ -0.94
PTPRK-206ENST00000368215 SNRNP48Q6IEG0 339 aaKnown RBP9.16□□□□□ -0.94
PTPRK-206ENST00000368215 CEP57Q86XR8 500 aa9.16□□□□□ -0.94
PTPRK-206ENST00000368215 PAF1Q8N7H5 531 aa9.16□□□□□ -0.94
PTPRK-206ENST00000368215 EDEM3Q9BZQ6 932 aa9.16□□□□□ -0.94
PTPRK-206ENST00000368215 HSD3B7Q9H2F3 369 aa9.16□□□□□ -0.94
PTPRK-206ENST00000368215 RNF146Q9NTX7 359 aa9.16□□□□□ -0.94
PTPRK-206ENST00000368215 RBM12Q9NTZ6 932 aaKnown RBP9.16□□□□□ -0.94
PTPRK-206ENST00000368215 NKIRAS1Q9NYS0 192 aa9.16□□□□□ -0.94
PTPRK-206ENST00000368215 SSU72P8A0A1W2PR75 194 aa9.16□□□□□ -0.94
PTPRK-206ENST00000368215 RNF225M0QZC1 329 aaPredicted RBP9.16□□□□□ -0.94
PTPRK-206ENST00000368215 ENTPD3O75355 529 aa9.16□□□□□ -0.94
PTPRK-206ENST00000368215 CCND2P30279 289 aa9.16□□□□□ -0.94
PTPRK-206ENST00000368215 ADCY1Q08828 1119 aa9.16□□□□□ -0.94
PTPRK-206ENST00000368215 EPHA7Q15375 998 aa9.16□□□□□ -0.94
PTPRK-206ENST00000368215 DALRD3Q5D0E6 543 aaKnown RBP9.16□□□□□ -0.94
PTPRK-206ENST00000368215 APOBEC3HQ6NTF7 200 aaKnown RBP9.16□□□□□ -0.94
PTPRK-206ENST00000368215 ZBTB33Q86T24 672 aa9.16□□□□□ -0.94
PTPRK-206ENST00000368215 RPUSD2Q8IZ73 545 aaKnown RBP9.16□□□□□ -0.94
PTPRK-206ENST00000368215 WRNIP1Q96S55 665 aa9.16□□□□□ -0.94
PTPRK-206ENST00000368215 SNX24Q9Y343 169 aa9.16□□□□□ -0.94
PTPRK-206ENST00000368215 A0A087X0T9 212 aa9.15□□□□□ -0.94
PTPRK-206ENST00000368215 DENND3A2RUS2 1198 aa9.15□□□□□ -0.94
PTPRK-206ENST00000368215 KLRC4O43908 158 aa9.15□□□□□ -0.94
PTPRK-206ENST00000368215 FGRP09769 529 aa9.15□□□□□ -0.94
PTPRK-206ENST00000368215 FAM228BP0C875 321 aa9.15□□□□□ -0.94
PTPRK-206ENST00000368215 TM4SF1P30408 202 aa9.15□□□□□ -0.94
PTPRK-206ENST00000368215 IFNAR2P48551 515 aa9.15□□□□□ -0.94
PTPRK-206ENST00000368215 VAMP7P51809 220 aa9.15□□□□□ -0.94
PTPRK-206ENST00000368215 CCDC91Q7Z6B0 441 aa9.15□□□□□ -0.94
PTPRK-206ENST00000368215 ZDHHC15Q96MV8 337 aa9.15□□□□□ -0.94
PTPRK-206ENST00000368215 RRP15Q9Y3B9 282 aaKnown RBP9.15□□□□□ -0.94
PTPRK-206ENST00000368215 MYO3BQ8WXR4 1341 aa9.15□□□□□ -0.94
PTPRK-206ENST00000368215 MARK3P27448 753 aa9.15□□□□□ -0.94
PTPRK-206ENST00000368215 LMBRD2Q68DH5 695 aaPredicted RBP9.15□□□□□ -0.94
PTPRK-206ENST00000368215 HAUS6Q7Z4H7 955 aa9.15□□□□□ -0.94
PTPRK-206ENST00000368215 IPO4Q8TEX9 1081 aaKnown RBP9.15□□□□□ -0.94
PTPRK-206ENST00000368215 PPP1R16BQ96T49 567 aa9.15□□□□□ -0.94
PTPRK-206ENST00000368215 MAK16Q9BXY0 300 aaKnown RBP9.15□□□□□ -0.94
PTPRK-206ENST00000368215 FUT8Q9BYC5 575 aa9.15□□□□□ -0.94
PTPRK-206ENST00000368215 GABBR1Q9UBS5 961 aa9.15□□□□□ -0.94
PTPRK-206ENST00000368215 SERPINA10Q9UK55 444 aa9.15□□□□□ -0.94
PTPRK-206ENST00000368215 PLAAQ9Y263 795 aa9.15□□□□□ -0.94
PTPRK-206ENST00000368215 A0A1W2PQJ5 194 aa9.15□□□□□ -0.95
PTPRK-206ENST00000368215 CD58P19256 250 aa9.15□□□□□ -0.95
PTPRK-206ENST00000368215 SWSAP1Q6NVH7 229 aa9.15□□□□□ -0.95
PTPRK-206ENST00000368215 MSANTD4Q8NCY6 345 aa9.15□□□□□ -0.95
PTPRK-206ENST00000368215 SCFD1Q8WVM8 642 aa9.15□□□□□ -0.95
PTPRK-206ENST00000368215 ZNF668Q96K58 619 aaPredicted RBP9.15□□□□□ -0.95
PTPRK-206ENST00000368215 IQCGQ9H095 443 aaKnown RBP9.15□□□□□ -0.95
PTPRK-206ENST00000368215 VCPKMTQ9H867 229 aa9.15□□□□□ -0.95
PTPRK-206ENST00000368215 PIM2Q9P1W9 311 aa9.15□□□□□ -0.95
PTPRK-206ENST00000368215 CHORDC1Q9UHD1 332 aaPredicted RBP9.15□□□□□ -0.95
PTPRK-206ENST00000368215 NOVA2Q9UNW9 492 aaKnown RBP9.15□□□□□ -0.95
PTPRK-206ENST00000368215 A6NNZ2 444 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 WDR64B1ANS9 1081 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 TBX3O15119 743 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 THAP12O43422 761 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 EVI5O60447 810 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 FTLP02792 175 aaPredicted RBP9.14□□□□□ -0.95
PTPRK-206ENST00000368215 DR1Q01658 176 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 PPP2R5EQ16537 467 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 SHROOM1Q2M3G4 852 aaPredicted RBP9.14□□□□□ -0.95
PTPRK-206ENST00000368215 EDRF1Q3B7T1 1238 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 TUBB8Q3ZCM7 444 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 CYFIP1Q7L576 1253 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 TRAPPC11Q7Z392 1133 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 SPATA20Q8TB22 786 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 FAM163AQ96GL9 167 aaPredicted RBP9.14□□□□□ -0.95
PTPRK-206ENST00000368215 FAM213AQ9BRX8 229 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 PACSIN1Q9BY11 444 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 FAM114A2Q9NRY5 505 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 AMACRQ9UHK6 382 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 LRRC10BA6NIK2 292 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 INO80B-WBP1J3KQ70 363 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 TMEM191BP0C7N4 346 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 SOX5P35711 763 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 GALCP54803 685 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 GRM1Q13255 1194 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 MTMR2Q13614 643 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 EZH2Q15910 746 aaKnown RBP9.14□□□□□ -0.95
PTPRK-206ENST00000368215 ZNF394Q53GI3 561 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 SGO2Q562F6 1265 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 CCNI2Q6ZMN8 369 aaPredicted RBP9.14□□□□□ -0.95
PTPRK-206ENST00000368215 INO80BQ9C086 356 aaPredicted RBP9.14□□□□□ -0.95
PTPRK-206ENST00000368215 NOC2LQ9Y3T9 749 aaKnown RBP9.14□□□□□ -0.95
PTPRK-206ENST00000368215 NR1D1P20393 614 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 SSTR3P32745 418 aaPredicted RBP9.14□□□□□ -0.95
PTPRK-206ENST00000368215 NPY5RQ15761 445 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 BRDTQ58F21 947 aaPredicted RBP9.14□□□□□ -0.95
PTPRK-206ENST00000368215 BEND6Q5SZJ8 279 aaPredicted RBP9.14□□□□□ -0.95
PTPRK-206ENST00000368215 PLA2G4FQ68DD2 849 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 RINT1Q6NUQ1 792 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 RSBN1LQ6PCB5 846 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms