RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 ACTRT1Q8TDG2 376 aa18.05■□□□□ 0.48
SSH3-201ENST00000308127 PBKQ96KB5 322 aa18.05■□□□□ 0.48
SSH3-201ENST00000308127 SELENOSQ9BQE4 189 aa18.05■□□□□ 0.48
SSH3-201ENST00000308127 HAUS2Q9NVX0 235 aa18.05■□□□□ 0.48
SSH3-201ENST00000308127 COL5A3P25940 1745 aaPredicted RBP18.04■□□□□ 0.48
SSH3-201ENST00000308127 IGKV6D-41A0A0C4DH26 115 aa18.04■□□□□ 0.48
SSH3-201ENST00000308127 KRT13P13646 458 aa18.04■□□□□ 0.48
SSH3-201ENST00000308127 MARCKSL1P49006 195 aa18.04■□□□□ 0.48
SSH3-201ENST00000308127 CCDC121Q6ZUS5 278 aa18.04■□□□□ 0.48
SSH3-201ENST00000308127 TPH2Q8IWU9 490 aa18.04■□□□□ 0.48
SSH3-201ENST00000308127 LRRC45Q96CN5 670 aa18.04■□□□□ 0.48
SSH3-201ENST00000308127 SMCHD1A6NHR9 2005 aa18.04■□□□□ 0.48
SSH3-201ENST00000308127 hCG_1984214I3L0E3 225 aa18.04■□□□□ 0.48
SSH3-201ENST00000308127 TBCAO75347 108 aaKnown RBP18.04■□□□□ 0.48
SSH3-201ENST00000308127 NOVP48745 357 aa18.04■□□□□ 0.48
SSH3-201ENST00000308127 SEPT2Q15019 361 aa18.04■□□□□ 0.48
SSH3-201ENST00000308127 EDRF1Q3B7T1 1238 aa18.04■□□□□ 0.48
SSH3-201ENST00000308127 CBWD6Q4V339 395 aa18.04■□□□□ 0.48
SSH3-201ENST00000308127 CBWD3Q5JTY5 395 aa18.04■□□□□ 0.48
SSH3-201ENST00000308127 CBWD5Q5RIA9 395 aa18.04■□□□□ 0.48
SSH3-201ENST00000308127 MYCT1Q8N699 235 aa18.04■□□□□ 0.48
SSH3-201ENST00000308127 ZNF713Q8N859 430 aaPredicted RBP18.04■□□□□ 0.48
SSH3-201ENST00000308127 SH2D3AQ9BRG2 576 aa18.04■□□□□ 0.48
SSH3-201ENST00000308127 DNAJC18Q9H819 358 aa18.04■□□□□ 0.48
SSH3-201ENST00000308127 ACP6Q9NPH0 428 aa18.04■□□□□ 0.48
SSH3-201ENST00000308127 GGT7Q9UJ14 662 aa18.04■□□□□ 0.48
SSH3-201ENST00000308127 GAKO14976 1311 aa18.03■□□□□ 0.48
SSH3-201ENST00000308127 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.03■□□□□ 0.48
SSH3-201ENST00000308127 PPP2R2AP63151 447 aa18.03■□□□□ 0.48
SSH3-201ENST00000308127 DRAP1Q14919 205 aaPredicted RBP18.03■□□□□ 0.48
SSH3-201ENST00000308127 HYIQ5T013 277 aa18.03■□□□□ 0.48
SSH3-201ENST00000308127 CCDC113Q9H0I3 377 aa18.03■□□□□ 0.48
SSH3-201ENST00000308127 THAP2Q9H0W7 228 aa18.03■□□□□ 0.48
SSH3-201ENST00000308127 TISP43B9A030 160 aa18.03■□□□□ 0.48
SSH3-201ENST00000308127 ATMINO43313 823 aaPredicted RBP18.03■□□□□ 0.48
SSH3-201ENST00000308127 CUL1Q13616 776 aa18.03■□□□□ 0.48
SSH3-201ENST00000308127 CCDC38Q502W7 563 aa18.03■□□□□ 0.48
SSH3-201ENST00000308127 MICALCLQ6ZW33 695 aa18.03■□□□□ 0.48
SSH3-201ENST00000308127 FRMD5Q7Z6J6 570 aa18.03■□□□□ 0.48
SSH3-201ENST00000308127 CPLX4Q7Z7G2 160 aa18.03■□□□□ 0.48
SSH3-201ENST00000308127 ETNPPLQ8TBG4 499 aa18.03■□□□□ 0.48
SSH3-201ENST00000308127 MTFR1LQ9H019 292 aa18.03■□□□□ 0.48
SSH3-201ENST00000308127 SLC40A1Q9NP59 571 aa18.03■□□□□ 0.48
SSH3-201ENST00000308127 F8VZ95 297 aa18.02■□□□□ 0.48
SSH3-201ENST00000308127 TGFB1I1O43294 461 aa18.02■□□□□ 0.48
SSH3-201ENST00000308127 FSBPO95073 299 aa18.02■□□□□ 0.48
SSH3-201ENST00000308127 GCFC2P16383 781 aaKnown RBP18.02■□□□□ 0.48
SSH3-201ENST00000308127 ZNF76P36508 570 aa18.02■□□□□ 0.48
SSH3-201ENST00000308127 SLFN13Q68D06 897 aa18.02■□□□□ 0.48
SSH3-201ENST00000308127 CDC42EP5Q6NZY7 148 aa18.02■□□□□ 0.48
SSH3-201ENST00000308127 BANK1Q8NDB2 785 aa18.02■□□□□ 0.48
SSH3-201ENST00000308127 ALG3Q92685 438 aa18.02■□□□□ 0.48
SSH3-201ENST00000308127 SEC16BQ96JE7 1060 aa18.02■□□□□ 0.48
SSH3-201ENST00000308127 PKD2L1Q9P0L9 805 aa18.02■□□□□ 0.48
SSH3-201ENST00000308127 DNAJC12Q9UKB3 198 aa18.02■□□□□ 0.48
SSH3-201ENST00000308127 AMFRQ9UKV5 643 aa18.02■□□□□ 0.48
SSH3-201ENST00000308127 UTP11Q9Y3A2 253 aaKnown RBP18.02■□□□□ 0.48
SSH3-201ENST00000308127 FOXO6A8MYZ6 492 aa18.02■□□□□ 0.48
SSH3-201ENST00000308127 MSH4O15457 936 aa18.02■□□□□ 0.48
SSH3-201ENST00000308127 ATP2B4P23634 1241 aa18.02■□□□□ 0.48
SSH3-201ENST00000308127 USP8P40818 1118 aa18.02■□□□□ 0.48
SSH3-201ENST00000308127 IFNAR2P48551 515 aa18.02■□□□□ 0.48
SSH3-201ENST00000308127 CEP57Q86XR8 500 aa18.02■□□□□ 0.48
SSH3-201ENST00000308127 ATP8B4Q8TF62 1192 aa18.02■□□□□ 0.48
SSH3-201ENST00000308127 SLC20A1Q8WUM9 679 aa18.02■□□□□ 0.48
SSH3-201ENST00000308127 NGLY1Q96IV0 654 aa18.02■□□□□ 0.48
SSH3-201ENST00000308127 SCLT1Q96NL6 688 aa18.02■□□□□ 0.48
SSH3-201ENST00000308127 FRMD3A2A2Y4 597 aa18.01■□□□□ 0.47
SSH3-201ENST00000308127 UBAP1LF5GYI3 381 aa18.01■□□□□ 0.47
SSH3-201ENST00000308127 HGSO14964 777 aaPredicted RBP18.01■□□□□ 0.47
SSH3-201ENST00000308127 TRAPPC3O43617 180 aa18.01■□□□□ 0.47
SSH3-201ENST00000308127 CALUO43852 315 aaPredicted RBP18.01■□□□□ 0.47
SSH3-201ENST00000308127 RBM5P52756 815 aaKnown RBP eCLIP18.01■□□□□ 0.47
SSH3-201ENST00000308127 BYSLQ13895 437 aaKnown RBP18.01■□□□□ 0.47
SSH3-201ENST00000308127 E2F5Q15329 346 aa18.01■□□□□ 0.47
SSH3-201ENST00000308127 FAM186BQ8IYM0 893 aa18.01■□□□□ 0.47
SSH3-201ENST00000308127 LENG9Q96B70 501 aa18.01■□□□□ 0.47
SSH3-201ENST00000308127 C18orf8Q96DM3 657 aa18.01■□□□□ 0.47
SSH3-201ENST00000308127 VCPKMTQ9H867 229 aa18.01■□□□□ 0.47
SSH3-201ENST00000308127 COG5Q9UP83 839 aa18.01■□□□□ 0.47
SSH3-201ENST00000308127 TRAF3IP3Q9Y228 551 aa18.01■□□□□ 0.47
SSH3-201ENST00000308127 STXBP5LQ9Y2K9 1186 aa18.01■□□□□ 0.47
SSH3-201ENST00000308127 ARFGEF1Q9Y6D6 1849 aa18.01■□□□□ 0.47
SSH3-201ENST00000308127 STAT1P42224 750 aa18.01■□□□□ 0.47
SSH3-201ENST00000308127 VPS36Q86VN1 386 aa18.01■□□□□ 0.47
SSH3-201ENST00000308127 SYT2Q8N9I0 419 aaPredicted RBP18.01■□□□□ 0.47
SSH3-201ENST00000308127 KRT35Q92764 455 aa18.01■□□□□ 0.47
SSH3-201ENST00000308127 FMO2Q99518 471 aa18.01■□□□□ 0.47
SSH3-201ENST00000308127 KLC4Q9NSK0 619 aa18.01■□□□□ 0.47
SSH3-201ENST00000308127 PTPN22Q9Y2R2 807 aa18.01■□□□□ 0.47
SSH3-201ENST00000308127 WNK3Q9BYP7 1800 aa18.01■□□□□ 0.47
SSH3-201ENST00000308127 SERPINB2P05120 415 aa18.01■□□□□ 0.47
SSH3-201ENST00000308127 JAM2P57087 298 aa18.01■□□□□ 0.47
SSH3-201ENST00000308127 IFI35P80217 286 aaPredicted RBP18.01■□□□□ 0.47
SSH3-201ENST00000308127 IFI16Q16666 785 aaKnown RBP18.01■□□□□ 0.47
SSH3-201ENST00000308127 GPATCH4Q5T3I0 446 aaKnown RBP18.01■□□□□ 0.47
SSH3-201ENST00000308127 KIAA0825Q8IV33 1275 aa18.01■□□□□ 0.47
SSH3-201ENST00000308127 FBXO25Q8TCJ0 367 aa18.01■□□□□ 0.47
SSH3-201ENST00000308127 BTBD6Q96KE9 485 aa18.01■□□□□ 0.47
SSH3-201ENST00000308127 PCIF1Q9H4Z3 704 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms