RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 CUL1Q13616 776 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 B4GALNT4Q76KP1 1039 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 FRMD5Q7Z6J6 570 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 PARP9Q8IXQ6 854 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 DDX12PQ92771 950 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 SLCO2A1Q92959 643 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 AKT1S1Q96B36 256 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 FAM212AQ96EL1 285 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 TRIM47Q96LD4 638 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 KRT12Q99456 494 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 PLIN2Q99541 437 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 HERPUD2Q9BSE4 406 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 POLR3CQ9BUI4 534 aaPredicted RBP5.95□□□□□ -1.46
VPS50-202ENST00000305866 ABCF2Q9UG63 623 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 PPP1R9AQ9ULJ8 1098 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 SMCO2A6NFE2 343 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 MAPK13O15264 365 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 GRIN3BO60391 1043 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 GSTA1P08263 222 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 ACTN1P12814 892 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 CHRNB2P17787 502 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 CYP11B2P19099 503 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 PPP2R2AP63151 447 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 BNIP1Q12981 228 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 BIRC3Q13489 604 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 ITIH4Q14624 930 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 CTC1Q2NKJ3 1217 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 SAMD3Q8N6K7 520 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 C12orf50Q8NA57 414 aaPredicted RBP5.95□□□□□ -1.46
VPS50-202ENST00000305866 GJA10Q969M2 543 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 SLC35C1Q96A29 364 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 FAM136AQ96C01 138 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 PBKQ96KB5 322 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 PSMB7Q99436 277 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 NT5C3AQ9H0P0 336 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 IKZF4Q9H2S9 585 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 FAM207AQ9NSI2 230 aaPredicted RBP5.95□□□□□ -1.46
VPS50-202ENST00000305866 LRRC4BQ9NT99 713 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 SRP68Q9UHB9 627 aaKnown RBP5.95□□□□□ -1.46
VPS50-202ENST00000305866 PGAP2Q9UHJ9 254 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 VAV3Q9UKW4 847 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 NOC2LQ9Y3T9 749 aaKnown RBP5.95□□□□□ -1.46
VPS50-202ENST00000305866 POTEMA6NI47 508 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 EIF3DO15371 548 aaKnown RBP eCLIP5.94□□□□□ -1.46
VPS50-202ENST00000305866 TTLL1O95922 423 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 LINGO3P0C6S8 592 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 TSPY3P0CV98 308 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 TSPY8P0CW00 308 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 T-ENOLP0DO92 83 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 CFAP221Q4G0U5 840 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 APOBEC3HQ6NTF7 200 aaKnown RBP5.94□□□□□ -1.46
VPS50-202ENST00000305866 C8orf74Q6P047 294 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 RRAGAQ7L523 313 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 PTF1AQ7RTS3 328 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 CCDC91Q7Z6B0 441 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 DZIP1Q86YF9 867 aaKnown RBP5.94□□□□□ -1.46
VPS50-202ENST00000305866 IFT20Q8IY31 132 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 REXO1Q8N1G1 1221 aaKnown RBP5.94□□□□□ -1.46
VPS50-202ENST00000305866 TBCKQ8TEA7 893 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 LARP4BQ92615 738 aaKnown RBP5.94□□□□□ -1.46
VPS50-202ENST00000305866 KCNQ5Q9NR82 932 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 OLFML3Q9NRN5 406 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 TOMM22Q9NS69 142 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 KCND2Q9NZV8 630 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 GRID1Q9ULK0 1009 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 MYH9P35579 1960 aaKnown RBP5.94□□□□□ -1.46
VPS50-202ENST00000305866 NPHP3-ACAD11A0A0J9YXS1 232 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 ZBTB5O15062 677 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 TACC1O75410 805 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 MAPTP10636 758 aaKnown RBP5.94□□□□□ -1.46
VPS50-202ENST00000305866 TRIM21P19474 475 aaKnown RBP5.94□□□□□ -1.46
VPS50-202ENST00000305866 SLC9A1P19634 815 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 RFC4P35249 363 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 SREBF1P36956 1147 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 TECP42680 631 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 PAK2Q13177 524 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 CBLBQ13191 982 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 GIT2Q14161 759 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 SLC9A9Q8IVB4 645 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 C12orf56Q8IXR9 622 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 MDM1Q8TC05 714 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 PSPC1Q8WXF1 523 aaKnown RBP5.94□□□□□ -1.46
VPS50-202ENST00000305866 ARHGEF26Q96DR7 871 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.94□□□□□ -1.46
VPS50-202ENST00000305866 CELF4Q9BZC1 486 aaKnown RBP5.94□□□□□ -1.46
VPS50-202ENST00000305866 ACBD3Q9H3P7 528 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 DNAJC18Q9H819 358 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 ACTR5Q9H9F9 607 aaPredicted RBP5.94□□□□□ -1.46
VPS50-202ENST00000305866 ARHGEF10LQ9HCE6 1279 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 JADE2Q9NQC1 790 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 PANK4Q9NVE7 773 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 PCYOX1Q9UHG3 505 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 ASB3Q9Y575 518 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 COL4A3BPQ9Y5P4 624 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 PHF20L1A8MW92 1017 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 TMCO5BA8MYB1 307 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 MEIS2O14770 477 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 MED24O75448 989 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 TCEA3O75764 348 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 MAGEA1P43355 309 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms