RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 MIF4GDA9UHW6 222 aaKnown RBP17.63■□□□□ 0.41
SH3RF1-201ENST00000284637 STAT2P52630 851 aa17.63■□□□□ 0.41
SH3RF1-201ENST00000284637 TMPRSS15P98073 1019 aa17.63■□□□□ 0.41
SH3RF1-201ENST00000284637 SUSD4Q5VX71 490 aa17.63■□□□□ 0.41
SH3RF1-201ENST00000284637 NAIF1Q69YI7 327 aaPredicted RBP17.63■□□□□ 0.41
SH3RF1-201ENST00000284637 DACT3Q96B18 629 aaPredicted RBP17.63■□□□□ 0.41
SH3RF1-201ENST00000284637 ECT2Q9H8V3 914 aa17.63■□□□□ 0.41
SH3RF1-201ENST00000284637 DBNDD1Q9H9R9 158 aa17.63■□□□□ 0.41
SH3RF1-201ENST00000284637 RPAP1Q9BWH6 1393 aaPredicted RBP17.63■□□□□ 0.41
SH3RF1-201ENST00000284637 NR3C1P04150 777 aa17.63■□□□□ 0.41
SH3RF1-201ENST00000284637 SLC12A1Q13621 1099 aa17.63■□□□□ 0.41
SH3RF1-201ENST00000284637 FGFR1OP2Q9NVK5 253 aa17.63■□□□□ 0.41
SH3RF1-201ENST00000284637 GOLGA8QA0A0J9YX86 632 aa17.63■□□□□ 0.41
SH3RF1-201ENST00000284637 GOLGA8OA6NCC3 632 aa17.63■□□□□ 0.41
SH3RF1-201ENST00000284637 GOLGA8NF8WBI6 632 aa17.63■□□□□ 0.41
SH3RF1-201ENST00000284637 PRPSAP2O60256 369 aa17.63■□□□□ 0.41
SH3RF1-201ENST00000284637 ARL4AP40617 200 aa17.63■□□□□ 0.41
SH3RF1-201ENST00000284637 SYNE4Q8N205 404 aa17.63■□□□□ 0.41
SH3RF1-201ENST00000284637 SPATA4Q8NEY3 305 aa17.63■□□□□ 0.41
SH3RF1-201ENST00000284637 EFHD1Q9BUP0 239 aa17.63■□□□□ 0.41
SH3RF1-201ENST00000284637 TRAIPQ9BWF2 469 aa17.63■□□□□ 0.41
SH3RF1-201ENST00000284637 TAF1DQ9H5J8 278 aaPredicted RBP17.63■□□□□ 0.41
SH3RF1-201ENST00000284637 PEX3P56589 373 aa17.63■□□□□ 0.41
SH3RF1-201ENST00000284637 STOX1Q6ZVD7 989 aa17.63■□□□□ 0.41
SH3RF1-201ENST00000284637 HOMEZQ8IX15 550 aa17.63■□□□□ 0.41
SH3RF1-201ENST00000284637 TTC7AQ9ULT0 858 aaPredicted RBP17.63■□□□□ 0.41
SH3RF1-201ENST00000284637 UNC13AQ9UPW8 1703 aa17.63■□□□□ 0.41
SH3RF1-201ENST00000284637 GCLMP48507 274 aa17.63■□□□□ 0.41
SH3RF1-201ENST00000284637 TFDP1Q14186 410 aa17.63■□□□□ 0.41
SH3RF1-201ENST00000284637 EPM2AIP1Q7L775 607 aaPredicted RBP17.63■□□□□ 0.41
SH3RF1-201ENST00000284637 SKA2Q8WVK7 121 aaPredicted RBP17.63■□□□□ 0.41
SH3RF1-201ENST00000284637 ZRANB2O95218 330 aaKnown RBP eCLIP17.62■□□□□ 0.41
SH3RF1-201ENST00000284637 ZBED1O96006 694 aa17.62■□□□□ 0.41
SH3RF1-201ENST00000284637 HOXA7P31268 230 aaPredicted RBP17.62■□□□□ 0.41
SH3RF1-201ENST00000284637 LSP1P33241 339 aa17.62■□□□□ 0.41
SH3RF1-201ENST00000284637 RSBN1LQ6PCB5 846 aaPredicted RBP17.62■□□□□ 0.41
SH3RF1-201ENST00000284637 PROM2Q8N271 834 aa17.62■□□□□ 0.41
SH3RF1-201ENST00000284637 DEPDC1BQ8WUY9 529 aa17.62■□□□□ 0.41
SH3RF1-201ENST00000284637 GPR101Q96P66 508 aaPredicted RBP17.62■□□□□ 0.41
SH3RF1-201ENST00000284637 NUDCD1Q96RS6 583 aa17.62■□□□□ 0.41
SH3RF1-201ENST00000284637 HAUS8Q9BT25 410 aa17.62■□□□□ 0.41
SH3RF1-201ENST00000284637 LRRC1Q9BTT6 524 aa17.62■□□□□ 0.41
SH3RF1-201ENST00000284637 DIS3Q9Y2L1 958 aaKnown RBP17.62■□□□□ 0.41
SH3RF1-201ENST00000284637 GOLGA8MH3BSY2 632 aa17.62■□□□□ 0.41
SH3RF1-201ENST00000284637 GNGT2O14610 69 aa17.62■□□□□ 0.41
SH3RF1-201ENST00000284637 ZNF185O15231 689 aa17.62■□□□□ 0.41
SH3RF1-201ENST00000284637 CCND1P24385 295 aa17.62■□□□□ 0.41
SH3RF1-201ENST00000284637 MRPS35P82673 323 aaKnown RBP17.62■□□□□ 0.41
SH3RF1-201ENST00000284637 HLFQ16534 295 aa17.62■□□□□ 0.41
SH3RF1-201ENST00000284637 ATG16L1Q676U5 607 aa17.62■□□□□ 0.41
SH3RF1-201ENST00000284637 RIN2Q8WYP3 895 aaPredicted RBP17.62■□□□□ 0.41
SH3RF1-201ENST00000284637 TMEM47Q9BQJ4 181 aa17.62■□□□□ 0.41
SH3RF1-201ENST00000284637 IPO11Q9UI26 975 aaKnown RBP17.62■□□□□ 0.41
SH3RF1-201ENST00000284637 DCTN4Q9UJW0 460 aa17.62■□□□□ 0.41
SH3RF1-201ENST00000284637 USP17L5A8MUK1 530 aa17.62■□□□□ 0.41
SH3RF1-201ENST00000284637 EEF1B2P24534 225 aaKnown RBP17.62■□□□□ 0.41
SH3RF1-201ENST00000284637 COASYQ13057 564 aa17.62■□□□□ 0.41
SH3RF1-201ENST00000284637 ZNF394Q53GI3 561 aa17.62■□□□□ 0.41
SH3RF1-201ENST00000284637 DCAF15Q66K64 600 aa17.62■□□□□ 0.41
SH3RF1-201ENST00000284637 GADL1Q6ZQY3 521 aa17.62■□□□□ 0.41
SH3RF1-201ENST00000284637 CHP1Q99653 195 aa17.62■□□□□ 0.41
SH3RF1-201ENST00000284637 IPO5O00410 1097 aaKnown RBP17.62■□□□□ 0.41
SH3RF1-201ENST00000284637 BRAFP15056 766 aa17.62■□□□□ 0.41
SH3RF1-201ENST00000284637 CDO1Q16878 200 aa17.62■□□□□ 0.41
SH3RF1-201ENST00000284637 HP1BP3Q5SSJ5 553 aaPredicted RBP17.62■□□□□ 0.41
SH3RF1-201ENST00000284637 PPP1R2P3Q6NXS1 205 aa17.62■□□□□ 0.41
SH3RF1-201ENST00000284637 ADAM22Q9P0K1 906 aa17.62■□□□□ 0.41
SH3RF1-201ENST00000284637 FBXL5Q9UKA1 691 aa17.62■□□□□ 0.41
SH3RF1-201ENST00000284637 GPC5P78333 572 aa17.61■□□□□ 0.41
SH3RF1-201ENST00000284637 RAD54LQ92698 747 aa17.61■□□□□ 0.41
SH3RF1-201ENST00000284637 ATP6V1E2Q96A05 226 aa17.61■□□□□ 0.41
SH3RF1-201ENST00000284637 CCDC138Q96M89 665 aa17.61■□□□□ 0.41
SH3RF1-201ENST00000284637 DRC3Q9H069 523 aa17.61■□□□□ 0.41
SH3RF1-201ENST00000284637 PVALEFA0A1B0GWK0 134 aa17.61■□□□□ 0.41
SH3RF1-201ENST00000284637 PRDX5P30044 214 aa17.61■□□□□ 0.41
SH3RF1-201ENST00000284637 GRAMD4Q6IC98 578 aa17.61■□□□□ 0.41
SH3RF1-201ENST00000284637 ZNF746Q6NUN9 644 aaPredicted RBP17.61■□□□□ 0.41
SH3RF1-201ENST00000284637 CCNI2Q6ZMN8 369 aaPredicted RBP17.61■□□□□ 0.41
SH3RF1-201ENST00000284637 TRIML2Q8N7C3 387 aa17.61■□□□□ 0.41
SH3RF1-201ENST00000284637 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.61■□□□□ 0.41
SH3RF1-201ENST00000284637 AKT3Q9Y243 479 aa17.61■□□□□ 0.41
SH3RF1-201ENST00000284637 USP17L15C9J2P7 530 aa17.61■□□□□ 0.41
SH3RF1-201ENST00000284637 USP17L13C9JLJ4 530 aa17.61■□□□□ 0.41
SH3RF1-201ENST00000284637 USP17L11C9JVI0 530 aa17.61■□□□□ 0.41
SH3RF1-201ENST00000284637 USP17L18D6R9N7 530 aa17.61■□□□□ 0.41
SH3RF1-201ENST00000284637 USP17L22D6RA61 530 aa17.61■□□□□ 0.41
SH3RF1-201ENST00000284637 USP17L17D6RBQ6 530 aa17.61■□□□□ 0.41
SH3RF1-201ENST00000284637 USP17L19D6RCP7 530 aa17.61■□□□□ 0.41
SH3RF1-201ENST00000284637 USP17L20D6RJB6 530 aa17.61■□□□□ 0.41
SH3RF1-201ENST00000284637 COPEO14579 308 aa17.61■□□□□ 0.41
SH3RF1-201ENST00000284637 DEUP1Q05D60 604 aa17.61■□□□□ 0.41
SH3RF1-201ENST00000284637 USP17L24Q0WX57 530 aa17.61■□□□□ 0.41
SH3RF1-201ENST00000284637 USP17L6PQ6QN14 398 aa17.61■□□□□ 0.41
SH3RF1-201ENST00000284637 CRLF3Q8IUI8 442 aa17.61■□□□□ 0.41
SH3RF1-201ENST00000284637 MARCH10Q8NA82 808 aaPredicted RBP17.61■□□□□ 0.41
SH3RF1-201ENST00000284637 HSPH1Q92598 858 aa17.61■□□□□ 0.41
SH3RF1-201ENST00000284637 PNMA2Q9UL42 364 aa17.61■□□□□ 0.41
SH3RF1-201ENST00000284637 hCG_2014768A0A024R1R8 64 aa17.61■□□□□ 0.41
SH3RF1-201ENST00000284637 PPEF1O14829 653 aaPredicted RBP17.61■□□□□ 0.41
SH3RF1-201ENST00000284637 PFDN6O15212 129 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 168.9 ms