RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 BHMT2Q9H2M3 363 aa18.56■□□□□ 0.56
SPG7-201ENST00000268704 ERVK-5Q9HDB9 667 aa18.56■□□□□ 0.56
SPG7-201ENST00000268704 BCS1LQ9Y276 419 aa18.56■□□□□ 0.56
SPG7-201ENST00000268704 F8VZ95 297 aa18.55■□□□□ 0.56
SPG7-201ENST00000268704 EVI5O60447 810 aa18.55■□□□□ 0.56
SPG7-201ENST00000268704 HOXA7P31268 230 aaPredicted RBP18.55■□□□□ 0.56
SPG7-201ENST00000268704 USP8P40818 1118 aa18.55■□□□□ 0.56
SPG7-201ENST00000268704 PSEN1P49768 467 aa18.55■□□□□ 0.56
SPG7-201ENST00000268704 SCNN1DP51172 638 aa18.55■□□□□ 0.56
SPG7-201ENST00000268704 UBAP2Q5T6F2 1119 aaKnown RBP18.55■□□□□ 0.56
SPG7-201ENST00000268704 AADACL2Q6P093 401 aa18.55■□□□□ 0.56
SPG7-201ENST00000268704 EPM2AIP1Q7L775 607 aaPredicted RBP18.55■□□□□ 0.56
SPG7-201ENST00000268704 OLIG1Q8TAK6 271 aa18.55■□□□□ 0.56
SPG7-201ENST00000268704 GLG1Q92896 1179 aa18.55■□□□□ 0.56
SPG7-201ENST00000268704 SLC40A1Q9NP59 571 aa18.55■□□□□ 0.56
SPG7-201ENST00000268704 PITPNM2Q9BZ72 1349 aa18.55■□□□□ 0.56
SPG7-201ENST00000268704 FOCADQ5VW36 1801 aa18.55■□□□□ 0.56
SPG7-201ENST00000268704 C6orf229H3BNL8 230 aa18.55■□□□□ 0.56
SPG7-201ENST00000268704 SHBGP04278 402 aa18.55■□□□□ 0.56
SPG7-201ENST00000268704 RUFY4Q6ZNE9 571 aa18.55■□□□□ 0.56
SPG7-201ENST00000268704 RASGEF1CQ8N431 466 aa18.55■□□□□ 0.56
SPG7-201ENST00000268704 ATP8B4Q8TF62 1192 aa18.55■□□□□ 0.56
SPG7-201ENST00000268704 SEC16BQ96JE7 1060 aa18.55■□□□□ 0.56
SPG7-201ENST00000268704 KLC4Q9NSK0 619 aa18.55■□□□□ 0.56
SPG7-201ENST00000268704 SUCLA2Q9P2R7 463 aaPredicted RBP18.55■□□□□ 0.56
SPG7-201ENST00000268704 SMIM23A6NLE4 172 aa18.55■□□□□ 0.56
SPG7-201ENST00000268704 BARGINQ6ZT62 677 aa18.55■□□□□ 0.56
SPG7-201ENST00000268704 CYP2W1Q8TAV3 490 aa18.55■□□□□ 0.56
SPG7-201ENST00000268704 SLC35G2Q8TBE7 412 aa18.55■□□□□ 0.56
SPG7-201ENST00000268704 ETNPPLQ8TBG4 499 aa18.55■□□□□ 0.56
SPG7-201ENST00000268704 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.55■□□□□ 0.56
SPG7-201ENST00000268704 FAM163AQ96GL9 167 aaPredicted RBP18.55■□□□□ 0.56
SPG7-201ENST00000268704 HES6Q96HZ4 224 aa18.55■□□□□ 0.56
SPG7-201ENST00000268704 CCDC114Q96M63 670 aa18.55■□□□□ 0.56
SPG7-201ENST00000268704 GOLGA6L7A0A1B0GV03 622 aa18.54■□□□□ 0.56
SPG7-201ENST00000268704 FAM86B1E9PN63 330 aa18.54■□□□□ 0.56
SPG7-201ENST00000268704 CCDC188H7C350 402 aa18.54■□□□□ 0.56
SPG7-201ENST00000268704 FAM86B2P0C5J1 330 aa18.54■□□□□ 0.56
SPG7-201ENST00000268704 ARHGAP4P98171 946 aa18.54■□□□□ 0.56
SPG7-201ENST00000268704 IFFO1Q0D2I5 559 aa18.54■□□□□ 0.56
SPG7-201ENST00000268704 BIRC3Q13489 604 aa18.54■□□□□ 0.56
SPG7-201ENST00000268704 COG2Q14746 738 aa18.54■□□□□ 0.56
SPG7-201ENST00000268704 USH1GQ495M9 461 aa18.54■□□□□ 0.56
SPG7-201ENST00000268704 PRR5LQ6MZQ0 368 aa18.54■□□□□ 0.56
SPG7-201ENST00000268704 PALB2Q86YC2 1186 aa18.54■□□□□ 0.56
SPG7-201ENST00000268704 GOPCQ9HD26 462 aa18.54■□□□□ 0.56
SPG7-201ENST00000268704 RGL1Q9NZL6 768 aa18.54■□□□□ 0.56
SPG7-201ENST00000268704 PNMA2Q9UL42 364 aa18.54■□□□□ 0.56
SPG7-201ENST00000268704 DNM3Q9UQ16 869 aa18.54■□□□□ 0.56
SPG7-201ENST00000268704 UTP11Q9Y3A2 253 aaKnown RBP18.54■□□□□ 0.56
SPG7-201ENST00000268704 ADAMTSL1Q8N6G6 1762 aa18.54■□□□□ 0.56
SPG7-201ENST00000268704 CAND2O75155 1236 aa18.54■□□□□ 0.56
SPG7-201ENST00000268704 ZC2HC1CQ53FD0 456 aaPredicted RBP18.54■□□□□ 0.56
SPG7-201ENST00000268704 RC3H1Q5TC82 1133 aaKnown RBP18.54■□□□□ 0.56
SPG7-201ENST00000268704 EIF1ADQ8N9N8 165 aaKnown RBP18.54■□□□□ 0.56
SPG7-201ENST00000268704 ARHGEF26Q96DR7 871 aa18.54■□□□□ 0.56
SPG7-201ENST00000268704 TAS2R14Q9NYV8 317 aa18.54■□□□□ 0.56
SPG7-201ENST00000268704 MEIS2O14770 477 aa18.53■□□□□ 0.56
SPG7-201ENST00000268704 CALUO43852 315 aaPredicted RBP18.53■□□□□ 0.56
SPG7-201ENST00000268704 C15orf52Q6ZUT6 534 aaKnown RBP18.53■□□□□ 0.56
SPG7-201ENST00000268704 CCDC91Q7Z6B0 441 aa18.53■□□□□ 0.56
SPG7-201ENST00000268704 VPS36Q86VN1 386 aa18.53■□□□□ 0.56
SPG7-201ENST00000268704 SYT2Q8N9I0 419 aaPredicted RBP18.53■□□□□ 0.56
SPG7-201ENST00000268704 CCDC26Q8TAB7 109 aa18.53■□□□□ 0.56
SPG7-201ENST00000268704 PIGOQ8TEQ8 1089 aa18.53■□□□□ 0.56
SPG7-201ENST00000268704 CXorf56Q9H5V9 222 aa18.53■□□□□ 0.56
SPG7-201ENST00000268704 SEPT11Q9NVA2 429 aaKnown RBP18.53■□□□□ 0.56
SPG7-201ENST00000268704 HAUS2Q9NVX0 235 aa18.53■□□□□ 0.56
SPG7-201ENST00000268704 PDXKO00764 312 aa18.53■□□□□ 0.56
SPG7-201ENST00000268704 RASSF9O75901 435 aa18.53■□□□□ 0.56
SPG7-201ENST00000268704 CHRM1P11229 460 aaPredicted RBP18.53■□□□□ 0.56
SPG7-201ENST00000268704 POU5F1Q01860 360 aaKnown RBP18.53■□□□□ 0.56
SPG7-201ENST00000268704 GPATCH4Q5T3I0 446 aaKnown RBP18.53■□□□□ 0.56
SPG7-201ENST00000268704 BANK1Q8NDB2 785 aa18.53■□□□□ 0.56
SPG7-201ENST00000268704 TBC1D16Q8TBP0 767 aa18.53■□□□□ 0.56
SPG7-201ENST00000268704 FMO2Q99518 471 aa18.53■□□□□ 0.56
SPG7-201ENST00000268704 SLITRK6Q9H5Y7 841 aa18.53■□□□□ 0.56
SPG7-201ENST00000268704 AMFRQ9UKV5 643 aa18.53■□□□□ 0.56
SPG7-201ENST00000268704 ZBTB39O15060 712 aa18.53■□□□□ 0.56
SPG7-201ENST00000268704 NMT1P30419 496 aaKnown RBP18.53■□□□□ 0.56
SPG7-201ENST00000268704 MTMR3Q13615 1198 aa18.53■□□□□ 0.56
SPG7-201ENST00000268704 ZFPM1Q8IX07 1006 aa18.53■□□□□ 0.56
SPG7-201ENST00000268704 UHMK1Q8TAS1 419 aaKnown RBP18.53■□□□□ 0.56
SPG7-201ENST00000268704 ZKSCAN4Q969J2 545 aaPredicted RBP18.53■□□□□ 0.56
SPG7-201ENST00000268704 TYW1Q9NV66 732 aaKnown RBP18.53■□□□□ 0.56
SPG7-201ENST00000268704 TMOD4Q9NZQ9 345 aa18.53■□□□□ 0.56
SPG7-201ENST00000268704 SPDYE3A6NKU9 549 aa18.52■□□□□ 0.56
SPG7-201ENST00000268704 SMTNP53814 917 aa18.52■□□□□ 0.56
SPG7-201ENST00000268704 CACNB3P54284 484 aa18.52■□□□□ 0.56
SPG7-201ENST00000268704 SETQ01105 290 aaPredicted RBP18.52■□□□□ 0.56
SPG7-201ENST00000268704 NFIAQ12857 509 aa18.52■□□□□ 0.56
SPG7-201ENST00000268704 SLF2Q8IX21 1173 aa18.52■□□□□ 0.56
SPG7-201ENST00000268704 CERS5Q8N5B7 392 aa18.52■□□□□ 0.56
SPG7-201ENST00000268704 LENG9Q96B70 501 aa18.52■□□□□ 0.56
SPG7-201ENST00000268704 PSMD1Q99460 953 aa18.52■□□□□ 0.56
SPG7-201ENST00000268704 CHORDC1Q9UHD1 332 aaPredicted RBP18.52■□□□□ 0.56
SPG7-201ENST00000268704 RGL2O15211 777 aa18.52■□□□□ 0.55
SPG7-201ENST00000268704 TGFB1I1O43294 461 aa18.52■□□□□ 0.55
SPG7-201ENST00000268704 ATP2B4P23634 1241 aa18.52■□□□□ 0.55
SPG7-201ENST00000268704 HOXA13P31271 388 aaPredicted RBP18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms