RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Pla2g4eQ50L42 875 aa18.29■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Ano5Q75UR0 904 aa18.29■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Prpf38bQ80SY5 542 aaKnown RBP18.29■□□□□ 0.52
Ctcf-201ENSMUST00000005841 PdxkQ8K183 312 aa18.29■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Rrp36Q3UFY0 244 aaKnown RBP18.29■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Tsg101Q61187 391 aa18.29■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Kcnk18Q6VV64 394 aa18.29■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Stxbp5Q8K400 1152 aaKnown RBP18.29■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Mfsd5Q921Y4 450 aa18.29■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Bcl11bQ99PV8 884 aa18.29■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Igf2bp3Q9CPN8 579 aaKnown RBP18.29■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Gpihbp1Q9D1N2 228 aa18.29■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Riok3Q9DBU3 519 aaKnown RBP18.29■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Rsc1a1Q9ER99 582 aa18.29■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Cyp39a1Q9JKJ9 470 aa18.29■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Gabbr1Q9WV18 960 aa18.29■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Samd15F6XZJ7 620 aa18.28■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Hps5P59438 1126 aa18.28■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Ppp4cP97470 307 aa18.28■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Krt87Q6IMF0 495 aa18.28■□□□□ 0.52
Ctcf-201ENSMUST00000005841 CbsQ91WT9 561 aa18.28■□□□□ 0.52
Ctcf-201ENSMUST00000005841 ParvgQ9ERD8 331 aa18.28■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Klrc1Q9Z202 244 aa18.28■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Ccdc78D3Z5T1 437 aa18.28■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Gna11P21278 359 aa18.28■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Creb1Q01147 341 aaKnown RBP18.28■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Agbl1Q09M05 972 aa18.28■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Ctc1Q5SUQ9 1212 aa18.28■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Hdac10Q6P3E7 666 aa18.28■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Ccdc172Q810N9 267 aa18.28■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Fam228aQ8CDW1 299 aa18.28■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Ccdc28aQ8CEI3 192 aa18.28■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Dtnbp1Q91WZ8 352 aa18.28■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Ttll10A4Q9F3 704 aa18.28■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Gm14525B1AZA0 212 aa18.28■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Gm2012B1B0R1 212 aa18.28■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Mmrn1B2RPV6 1210 aa18.28■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Copb2O55029 905 aa18.28■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Frg1P97376 258 aaKnown RBP18.28■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Gm14819Q62478 212 aa18.28■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Brd2Q7JJ13 798 aaKnown RBP18.28■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Stk4Q9JI11 487 aa18.28■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Hebp1Q9R257 190 aa18.28■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Krt8P11679 490 aaKnown RBP18.27■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Spocd1B1ASB6 936 aa18.27■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Tex35Q14BK3 207 aa18.27■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Esyt3Q5DTI8 891 aa18.27■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Rps6kc1Q8BLK9 1056 aa18.27■□□□□ 0.52
Ctcf-201ENSMUST00000005841 McamQ8R2Y2 648 aaKnown RBP18.27■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Nt5c1bQ91YE9 573 aa18.27■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Fam187aQ9D3R5 417 aa18.27■□□□□ 0.52
Ctcf-201ENSMUST00000005841 Ltbp4Q8K4G1 1666 aa18.27■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Ppp1r9aH3BJD6 1292 aa18.27■□□□□ 0.51
Ctcf-201ENSMUST00000005841 GzmgP13366 248 aa18.27■□□□□ 0.51
Ctcf-201ENSMUST00000005841 RalylQ8BTF8 293 aa18.27■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Fam193aQ8CGI1 1231 aaKnown RBP18.27■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Kctd10Q922M3 315 aa18.27■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Cd274Q9EP73 290 aa18.27■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Trip6Q9Z1Y4 480 aa18.27■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Lrrc32G3XA59 663 aa18.26■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Rbm19Q8R3C6 952 aaKnown RBP18.26■□□□□ 0.51
Ctcf-201ENSMUST00000005841 AuhQ9JLZ3 314 aa18.26■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Pet2A2AHY8 747 aa18.26■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Cdcp1Q5U462 833 aa18.26■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Pank4Q80YV4 820 aa18.26■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Klhl36Q8R124 613 aa18.26■□□□□ 0.51
Ctcf-201ENSMUST00000005841 AdpgkQ8VDL4 496 aa18.26■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Gm7347D3YYI9 267 aa18.26■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Tada2bD3Z4Z0 420 aaKnown RBP18.26■□□□□ 0.51
Ctcf-201ENSMUST00000005841 XiapQ60989 496 aa18.26■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Rexo1Q7TT28 1213 aa18.26■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Ccdc113Q8C5T8 377 aa18.26■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Atp2a1Q8R429 994 aa18.26■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Rnf34Q99KR6 376 aa18.26■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Dgcr8Q9EQM6 773 aa18.26■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Gm4907B1AXB9 411 aa18.25■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Zfp174B9EJW5 407 aa18.25■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Tnfrsf11aO35305 625 aa18.25■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Gna14P30677 355 aa18.25■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Tcerg1lQ3B807 590 aa18.25■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Ppp1r21Q3TDD9 780 aa18.25■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Gm5592Q3V0A6 857 aa18.25■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Serpinb1cQ5SV42 375 aa18.25■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Krt12Q64291 487 aa18.25■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Parp6Q6P6P7 630 aa18.25■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Lmo3Q8BZL8 145 aa18.25■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Zfp120Q8BZW4 436 aa18.25■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Golga1Q9CW79 758 aa18.25■□□□□ 0.51
Ctcf-201ENSMUST00000005841 DexiQ9WUQ7 95 aa18.25■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Syngap1F6SEU4 1340 aa18.25■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Tal1P22091 329 aa18.25■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Alppl2P24823 529 aa18.25■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Mnat1P51949 309 aa18.25■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Ccp110Q7TSH4 1004 aa18.25■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Tbx18Q9EPZ6 613 aa18.25■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Add1Q9QYC0 735 aaKnown RBP18.25■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Scn4aQ9ER60 1841 aa18.25■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Mroh9G5E8L9 891 aa18.25■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Lrch1P62046 709 aa18.25■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Igsf9Q05BQ1 1179 aa18.25■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 20.4 ms