RNA–Protein interactions for RNA: ENST00000636881.1

CHD2-226, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 3,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-226ENST00000636881 NUDT17P0C025 328 aa9.25□□□□□ -0.93
CHD2-226ENST00000636881 TSPY3P0CV98 308 aa9.25□□□□□ -0.93
CHD2-226ENST00000636881 TSPY8P0CW00 308 aa9.25□□□□□ -0.93
CHD2-226ENST00000636881 RARAP10276 462 aa9.25□□□□□ -0.93
CHD2-226ENST00000636881 ATF3P18847 181 aa9.25□□□□□ -0.93
CHD2-226ENST00000636881 ADAM9Q13443 819 aa9.25□□□□□ -0.93
CHD2-226ENST00000636881 SLC29A2Q14542 456 aa9.25□□□□□ -0.93
CHD2-226ENST00000636881 SEPT2Q15019 361 aa9.25□□□□□ -0.93
CHD2-226ENST00000636881 ERICH1Q86X53 443 aa9.25□□□□□ -0.93
CHD2-226ENST00000636881 COL23A1Q86Y22 540 aaPredicted RBP9.25□□□□□ -0.93
CHD2-226ENST00000636881 SPICE1Q8N0Z3 855 aa9.25□□□□□ -0.93
CHD2-226ENST00000636881 KCNV2Q8TDN2 545 aa9.25□□□□□ -0.93
CHD2-226ENST00000636881 ZBTB10Q96DT7 871 aa9.25□□□□□ -0.93
CHD2-226ENST00000636881 ACSBG1Q96GR2 724 aa9.25□□□□□ -0.93
CHD2-226ENST00000636881 ERP44Q9BS26 406 aa9.25□□□□□ -0.93
CHD2-226ENST00000636881 HOMER3Q9NSC5 361 aa9.25□□□□□ -0.93
CHD2-226ENST00000636881 A0A1B0GUL6 1792 aa9.24□□□□□ -0.93
CHD2-226ENST00000636881 NUP98P52948 1817 aa9.24□□□□□ -0.93
CHD2-226ENST00000636881 COL22A1Q8NFW1 1626 aaPredicted RBP9.24□□□□□ -0.93
CHD2-226ENST00000636881 A8MUI8 341 aa9.24□□□□□ -0.93
CHD2-226ENST00000636881 KLRF2D3W0D1 207 aa9.24□□□□□ -0.93
CHD2-226ENST00000636881 CETN3O15182 167 aa9.24□□□□□ -0.93
CHD2-226ENST00000636881 SNX3O60493 162 aa9.24□□□□□ -0.93
CHD2-226ENST00000636881 ATP2A2P16615 1042 aaKnown RBP9.24□□□□□ -0.93
CHD2-226ENST00000636881 COPS2P61201 443 aa9.24□□□□□ -0.93
CHD2-226ENST00000636881 RBBP5Q15291 538 aaKnown RBP9.24□□□□□ -0.93
CHD2-226ENST00000636881 PPP2R5EQ16537 467 aa9.24□□□□□ -0.93
CHD2-226ENST00000636881 ZNF34Q8IZ26 560 aa9.24□□□□□ -0.93
CHD2-226ENST00000636881 REXO1Q8N1G1 1221 aaKnown RBP9.24□□□□□ -0.93
CHD2-226ENST00000636881 GBP7Q8N8V2 638 aaPredicted RBP9.24□□□□□ -0.93
CHD2-226ENST00000636881 ATP8B4Q8TF62 1192 aa9.24□□□□□ -0.93
CHD2-226ENST00000636881 SEC14L1Q92503 715 aa9.24□□□□□ -0.93
CHD2-226ENST00000636881 PIGBQ92521 554 aa9.24□□□□□ -0.93
CHD2-226ENST00000636881 NAP1L3Q99457 506 aaPredicted RBP9.24□□□□□ -0.93
CHD2-226ENST00000636881 SLC5A4Q9NY91 659 aa9.24□□□□□ -0.93
CHD2-226ENST00000636881 MTRF1LQ9UGC7 380 aaKnown RBP9.24□□□□□ -0.93
CHD2-226ENST00000636881 CORO1CQ9ULV4 474 aaPredicted RBP9.24□□□□□ -0.93
CHD2-226ENST00000636881 USP17L3A6NCW0 530 aa9.24□□□□□ -0.93
CHD2-226ENST00000636881 USP17L4A6NCW7 530 aa9.24□□□□□ -0.93
CHD2-226ENST00000636881 EIF4E1BA6NMX2 242 aaKnown RBP9.24□□□□□ -0.93
CHD2-226ENST00000636881 HGSO14964 777 aaPredicted RBP9.24□□□□□ -0.93
CHD2-226ENST00000636881 USP17L8P0C7I0 530 aa9.24□□□□□ -0.93
CHD2-226ENST00000636881 ALADP13716 330 aa9.24□□□□□ -0.93
CHD2-226ENST00000636881 SLC9A1P19634 815 aa9.24□□□□□ -0.93
CHD2-226ENST00000636881 COPB2P35606 906 aa9.24□□□□□ -0.93
CHD2-226ENST00000636881 CCDC38Q502W7 563 aa9.24□□□□□ -0.93
CHD2-226ENST00000636881 ZCWPW2Q504Y3 356 aa9.24□□□□□ -0.93
CHD2-226ENST00000636881 USP17L1Q7RTZ2 530 aa9.24□□□□□ -0.93
CHD2-226ENST00000636881 IRF2BP2Q7Z5L9 587 aa9.24□□□□□ -0.93
CHD2-226ENST00000636881 NT5DC3Q86UY8 548 aa9.24□□□□□ -0.93
CHD2-226ENST00000636881 CCDC65Q8IXS2 484 aa9.24□□□□□ -0.93
CHD2-226ENST00000636881 ZNF444Q8N0Y2 327 aaPredicted RBP9.24□□□□□ -0.93
CHD2-226ENST00000636881 SPDYE1Q8NFV5 336 aaPredicted RBP9.24□□□□□ -0.93
CHD2-226ENST00000636881 RNF25Q96BH1 459 aaPredicted RBP9.24□□□□□ -0.93
CHD2-226ENST00000636881 MTFR1LQ9H019 292 aa9.24□□□□□ -0.93
CHD2-226ENST00000636881 HDAC9Q9UKV0 1011 aa9.24□□□□□ -0.93
CHD2-226ENST00000636881 FAM187AA6NFU0 413 aa9.23□□□□□ -0.93
CHD2-226ENST00000636881 ERVV-1B6SEH8 477 aa9.23□□□□□ -0.93
CHD2-226ENST00000636881 KRT18P05783 430 aaKnown RBP9.23□□□□□ -0.93
CHD2-226ENST00000636881 KRT16P08779 473 aa9.23□□□□□ -0.93
CHD2-226ENST00000636881 MSH2P43246 934 aa9.23□□□□□ -0.93
CHD2-226ENST00000636881 LRRC14Q15048 493 aa9.23□□□□□ -0.93
CHD2-226ENST00000636881 SLC35G1Q2M3R5 365 aa9.23□□□□□ -0.93
CHD2-226ENST00000636881 FOXR2Q6PJQ5 311 aa9.23□□□□□ -0.93
CHD2-226ENST00000636881 KCNK18Q7Z418 384 aa9.23□□□□□ -0.93
CHD2-226ENST00000636881 RNF217Q8TC41 542 aa9.23□□□□□ -0.93
CHD2-226ENST00000636881 EPS8L3Q8TE67 593 aaKnown RBP9.23□□□□□ -0.93
CHD2-226ENST00000636881 PARD3BQ8TEW8 1205 aa9.23□□□□□ -0.93
CHD2-226ENST00000636881 CNKSR1Q969H4 720 aa9.23□□□□□ -0.93
CHD2-226ENST00000636881 LZTS2Q9BRK4 669 aa9.23□□□□□ -0.93
CHD2-226ENST00000636881 TRIM7Q9C029 511 aa9.23□□□□□ -0.93
CHD2-226ENST00000636881 ADAM7Q9H2U9 754 aa9.23□□□□□ -0.93
CHD2-226ENST00000636881 IL17RBQ9NRM6 502 aa9.23□□□□□ -0.93
CHD2-226ENST00000636881 FGFR1OP2Q9NVK5 253 aa9.23□□□□□ -0.93
CHD2-226ENST00000636881 TMEM260Q9NX78 707 aa9.23□□□□□ -0.93
CHD2-226ENST00000636881 CPSF2Q9P2I0 782 aaKnown RBP9.23□□□□□ -0.93
CHD2-226ENST00000636881 CACNA1SQ13698 1873 aa9.23□□□□□ -0.93
CHD2-226ENST00000636881 TCP11X1B4DZS4 312 aa9.23□□□□□ -0.93
CHD2-226ENST00000636881 RASGRF2O14827 1237 aa9.23□□□□□ -0.93
CHD2-226ENST00000636881 ADAMTS2O95450 1211 aa9.23□□□□□ -0.93
CHD2-226ENST00000636881 UCHL3P15374 230 aa9.23□□□□□ -0.93
CHD2-226ENST00000636881 FXR2P51116 673 aaKnown RBP eCLIP9.23□□□□□ -0.939e-8■■■□□ 15.4
CHD2-226ENST00000636881 PTENP60484 403 aa9.23□□□□□ -0.93
CHD2-226ENST00000636881 MECOMQ03112 1051 aa9.23□□□□□ -0.93
CHD2-226ENST00000636881 HERC4Q5GLZ8 1057 aaPredicted RBP9.23□□□□□ -0.93
CHD2-226ENST00000636881 KIAA1755Q5JYT7 1200 aa9.23□□□□□ -0.93
CHD2-226ENST00000636881 ANKRD20A2Q5SQ80 823 aa9.23□□□□□ -0.93
CHD2-226ENST00000636881 ANKRD20A1Q5TYW2 823 aa9.23□□□□□ -0.93
CHD2-226ENST00000636881 ANKRD20A3Q5VUR7 823 aa9.23□□□□□ -0.93
CHD2-226ENST00000636881 TCERG1LQ5VWI1 586 aa9.23□□□□□ -0.93
CHD2-226ENST00000636881 TRIM68Q6AZZ1 485 aa9.23□□□□□ -0.93
CHD2-226ENST00000636881 FBXO25Q8TCJ0 367 aa9.23□□□□□ -0.93
CHD2-226ENST00000636881 GLG1Q92896 1179 aa9.23□□□□□ -0.93
CHD2-226ENST00000636881 DYNLL2Q96FJ2 89 aa9.23□□□□□ -0.93
CHD2-226ENST00000636881 NUDT12Q9BQG2 462 aa9.23□□□□□ -0.93
CHD2-226ENST00000636881 OSBPL1AQ9BXW6 950 aa9.23□□□□□ -0.93
CHD2-226ENST00000636881 TXLNGYQ9BZA5 131 aa9.23□□□□□ -0.93
CHD2-226ENST00000636881 STXBP5LQ9Y2K9 1186 aa9.23□□□□□ -0.93
CHD2-226ENST00000636881 LIN7AO14910 233 aaPredicted RBP9.23□□□□□ -0.93
CHD2-226ENST00000636881 CYP19A1P11511 503 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms