RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 DUX4Q9UBX2 424 aa6.74□□□□□ -1.33
CDKL5-205ENST00000623535 DAAM1Q9Y4D1 1078 aa6.74□□□□□ -1.33
CDKL5-205ENST00000623535 TOPBP1Q92547 1522 aa6.74□□□□□ -1.33
CDKL5-205ENST00000623535 ELP1O95163 1332 aa6.74□□□□□ -1.33
CDKL5-205ENST00000623535 PPP1R12AO14974 1030 aaPredicted RBP6.74□□□□□ -1.33
CDKL5-205ENST00000623535 MRPS31Q92665 395 aaKnown RBP6.74□□□□□ -1.33
CDKL5-205ENST00000623535 HEXIM2Q96MH2 286 aaKnown RBP6.74□□□□□ -1.33
CDKL5-205ENST00000623535 VPS51Q9UID3 782 aa6.74□□□□□ -1.33
CDKL5-205ENST00000623535 PLA2G4CQ9UP65 541 aa6.74□□□□□ -1.33
CDKL5-205ENST00000623535 A2MP01023 1474 aa6.74□□□□□ -1.33
CDKL5-205ENST00000623535 C5orf58C9J3I9 102 aa6.74□□□□□ -1.33
CDKL5-205ENST00000623535 TAF1BQ53T94 588 aaPredicted RBP6.74□□□□□ -1.33
CDKL5-205ENST00000623535 KRT82Q9NSB4 513 aa6.74□□□□□ -1.33
CDKL5-205ENST00000623535 SPATS2LQ9NUQ6 558 aaKnown RBP6.74□□□□□ -1.33
CDKL5-205ENST00000623535 USP18Q9UMW8 372 aa6.74□□□□□ -1.33
CDKL5-205ENST00000623535 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.74□□□□□ -1.33
CDKL5-205ENST00000623535 CREMQ03060 361 aa6.74□□□□□ -1.33
CDKL5-205ENST00000623535 ATG16L1Q676U5 607 aa6.74□□□□□ -1.33
CDKL5-205ENST00000623535 ERAP2Q6P179 960 aa6.74□□□□□ -1.33
CDKL5-205ENST00000623535 MMGT1Q8N4V1 131 aa6.74□□□□□ -1.33
CDKL5-205ENST00000623535 AOPEPQ8N6M6 819 aa6.74□□□□□ -1.33
CDKL5-205ENST00000623535 ACCSQ96QU6 501 aa6.74□□□□□ -1.33
CDKL5-205ENST00000623535 TNFSF13BQ9Y275 285 aa6.74□□□□□ -1.33
CDKL5-205ENST00000623535 MSCO60682 206 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 PLCL1Q15111 1095 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 MAPK6Q16659 721 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 ANKRD20A4Q4UJ75 823 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 ANKRD20A8PQ5CZ79 823 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 ANKRD20A2Q5SQ80 823 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 ANKRD20A1Q5TYW2 823 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 SFMBT2Q5VUG0 894 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 MRPL48Q96GC5 212 aaKnown RBP6.73□□□□□ -1.33
CDKL5-205ENST00000623535 ZC4H2Q9NQZ6 224 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 SEL1LQ9UBV2 794 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 MTFR1Q15390 333 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 TTC38Q5R3I4 469 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 DENND2CQ68D51 928 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 TAGAPQ8N103 731 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 ARHGAP18Q8N392 663 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 C12orf50Q8NA57 414 aaPredicted RBP6.73□□□□□ -1.33
CDKL5-205ENST00000623535 SPATA33Q96N06 139 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 SLF1Q9BQI6 1058 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 ARMT1Q9H993 441 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.73□□□□□ -1.33
CDKL5-205ENST00000623535 FEM1BQ9UK73 627 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 H3BRJ5 948 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 MARK3P27448 753 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 GCKRQ14397 625 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 HLA-DQA1Q5Y7H0 255 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 TRIM59Q8IWR1 403 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 TUFT1Q9NNX1 390 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 GCFC2P16383 781 aaKnown RBP6.73□□□□□ -1.33
CDKL5-205ENST00000623535 ALG11Q2TAA5 492 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 PEX26Q7Z412 305 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 TMEM199Q8N511 208 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 MB21D1Q8N884 522 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 CARD6Q9BX69 1037 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 AMFRQ9UKV5 643 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 USP17L10C9JJH3 530 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 SLC9A1P19634 815 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 FAR1Q8WVX9 515 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 APPBP2Q92624 585 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 MRRFQ96E11 262 aaKnown RBP6.73□□□□□ -1.33
CDKL5-205ENST00000623535 CEP19Q96LK0 163 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 DBNDD1Q9H9R9 158 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 TMEM39AQ9NV64 488 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 SMARCAL1Q9NZC9 954 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 INHBAP08476 426 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 LMNTD2Q8IXW0 634 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 PPM1KQ8N3J5 372 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 KCTD6Q8NC69 237 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 TRIT1Q9H3H1 467 aaKnown RBP6.73□□□□□ -1.33
CDKL5-205ENST00000623535 FBXO10Q9UK96 956 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 JCADQ9P266 1359 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 NOS1P29475 1434 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 NPATQ14207 1427 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 KRT72Q14CN4 511 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 ESRP1Q6NXG1 681 aaKnown RBP6.73□□□□□ -1.33
CDKL5-205ENST00000623535 METTL22Q9BUU2 404 aaPredicted RBP6.73□□□□□ -1.33
CDKL5-205ENST00000623535 SLC52A2Q9HAB3 445 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 MRFAP1Q9Y605 127 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 RPTORQ8N122 1335 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 KPNA6O60684 536 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 KLHL30Q0D2K2 578 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 TFCP2Q12800 502 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 TOMM20Q15388 145 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 GSTA3Q16772 222 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 ZNF557Q8N988 423 aaPredicted RBP6.73□□□□□ -1.33
CDKL5-205ENST00000623535 TTC8Q8TAM2 541 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 NMRK1Q9NWW6 199 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 SERPINB13Q9UIV8 391 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 NPHP4O75161 1426 aaPredicted RBP6.73□□□□□ -1.33
CDKL5-205ENST00000623535 M0QYT0 321 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 GPR1P46091 355 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 UBE2HP62256 183 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 USPL1Q5W0Q7 1092 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 PLEKHM3Q6ZWE6 761 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 ZNF513Q8N8E2 541 aaPredicted RBP6.73□□□□□ -1.33
CDKL5-205ENST00000623535 NSUN6Q8TEA1 469 aaKnown RBP6.73□□□□□ -1.33
CDKL5-205ENST00000623535 TBC1D32Q96NH3 1257 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms