RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 ADAMTSL1Q8N6G6 1762 aa12.89□□□□□ -0.35
C11orf54-215ENST00000617482 EML1O00423 815 aa12.89□□□□□ -0.35
C11orf54-215ENST00000617482 EBAG9O00559 213 aa12.89□□□□□ -0.35
C11orf54-215ENST00000617482 PPARDQ03181 441 aa12.89□□□□□ -0.35
C11orf54-215ENST00000617482 Q4G0T1 1027 aa12.89□□□□□ -0.35
C11orf54-215ENST00000617482 MOXD1Q6UVY6 613 aa12.89□□□□□ -0.35
C11orf54-215ENST00000617482 SH3BP5LQ7L8J4 393 aa12.89□□□□□ -0.35
C11orf54-215ENST00000617482 DDX42Q86XP3 938 aaKnown RBP eCLIP12.89□□□□□ -0.35
C11orf54-215ENST00000617482 LRRC57Q8N9N7 239 aa12.89□□□□□ -0.35
C11orf54-215ENST00000617482 PI4KBQ9UBF8 816 aa12.89□□□□□ -0.35
C11orf54-215ENST00000617482 TMEM59LQ9UK28 342 aa12.89□□□□□ -0.35
C11orf54-215ENST00000617482 SHTN1A0MZ66 631 aa12.89□□□□□ -0.35
C11orf54-215ENST00000617482 ZBTB39O15060 712 aa12.89□□□□□ -0.35
C11orf54-215ENST00000617482 TBCAO75347 108 aaKnown RBP12.89□□□□□ -0.35
C11orf54-215ENST00000617482 GFPT2O94808 682 aa12.89□□□□□ -0.35
C11orf54-215ENST00000617482 NDUFB10O96000 172 aa12.89□□□□□ -0.35
C11orf54-215ENST00000617482 ERVK-9P63128 1117 aa12.89□□□□□ -0.35
C11orf54-215ENST00000617482 CTTNQ14247 550 aaKnown RBP12.89□□□□□ -0.35
C11orf54-215ENST00000617482 C10orf76Q5T2E6 689 aa12.89□□□□□ -0.35
C11orf54-215ENST00000617482 MAATS1Q7Z4T9 603 aa12.89□□□□□ -0.35
C11orf54-215ENST00000617482 KSR1Q8IVT5 923 aa12.89□□□□□ -0.35
C11orf54-215ENST00000617482 SPICE1Q8N0Z3 855 aa12.89□□□□□ -0.35
C11orf54-215ENST00000617482 METTL13Q8N6R0 699 aa12.89□□□□□ -0.35
C11orf54-215ENST00000617482 SLC35C1Q96A29 364 aa12.89□□□□□ -0.35
C11orf54-215ENST00000617482 EIF2AK1Q9BQI3 630 aaKnown RBP12.89□□□□□ -0.35
C11orf54-215ENST00000617482 SIX2Q9NPC8 291 aa12.89□□□□□ -0.35
C11orf54-215ENST00000617482 TYW1Q9NV66 732 aaKnown RBP12.89□□□□□ -0.35
C11orf54-215ENST00000617482 FAM198AQ9UFP1 575 aa12.89□□□□□ -0.35
C11orf54-215ENST00000617482 RABGAP1Q9Y3P9 1069 aa12.89□□□□□ -0.35
C11orf54-215ENST00000617482 UBR3Q6ZT12 1888 aa12.89□□□□□ -0.35
C11orf54-215ENST00000617482 BTNL10A8MVZ5 291 aa12.88□□□□□ -0.35
C11orf54-215ENST00000617482 TBX3O15119 743 aa12.88□□□□□ -0.35
C11orf54-215ENST00000617482 SLC26A4O43511 780 aa12.88□□□□□ -0.35
C11orf54-215ENST00000617482 CHMP2AO43633 222 aa12.88□□□□□ -0.35
C11orf54-215ENST00000617482 FLOT1O75955 427 aa12.88□□□□□ -0.35
C11orf54-215ENST00000617482 TRIM37O94972 964 aa12.88□□□□□ -0.35
C11orf54-215ENST00000617482 RPL13P26373 211 aaKnown RBP12.88□□□□□ -0.35
C11orf54-215ENST00000617482 SKOR1P84550 965 aa12.88□□□□□ -0.35
C11orf54-215ENST00000617482 GRIPAP1Q4V328 841 aa12.88□□□□□ -0.35
C11orf54-215ENST00000617482 ZC2HC1CQ53FD0 456 aaPredicted RBP12.88□□□□□ -0.35
C11orf54-215ENST00000617482 TPCN2Q8NHX9 752 aa12.88□□□□□ -0.35
C11orf54-215ENST00000617482 U2AF1L4Q8WU68 220 aaKnown RBP12.88□□□□□ -0.35
C11orf54-215ENST00000617482 RNPC3Q96LT9 517 aaKnown RBP12.88□□□□□ -0.35
C11orf54-215ENST00000617482 FAM20AQ96MK3 541 aa12.88□□□□□ -0.35
C11orf54-215ENST00000617482 DDX47Q9H0S4 455 aaKnown RBP12.88□□□□□ -0.35
C11orf54-215ENST00000617482 CENPHQ9H3R5 247 aa12.88□□□□□ -0.35
C11orf54-215ENST00000617482 TAF1DQ9H5J8 278 aaPredicted RBP12.88□□□□□ -0.35
C11orf54-215ENST00000617482 VAV3Q9UKW4 847 aa12.88□□□□□ -0.35
C11orf54-215ENST00000617482 AFF2P51816 1311 aa12.88□□□□□ -0.35
C11orf54-215ENST00000617482 FOCADQ5VW36 1801 aa12.88□□□□□ -0.35
C11orf54-215ENST00000617482 NMT1P30419 496 aaKnown RBP12.88□□□□□ -0.35
C11orf54-215ENST00000617482 SREBF1P36956 1147 aa12.88□□□□□ -0.35
C11orf54-215ENST00000617482 GUCY1A3Q02108 690 aa12.88□□□□□ -0.35
C11orf54-215ENST00000617482 IFI16Q16666 785 aaKnown RBP12.88□□□□□ -0.35
C11orf54-215ENST00000617482 SYDE2Q5VT97 1194 aa12.88□□□□□ -0.35
C11orf54-215ENST00000617482 PEX26Q7Z412 305 aa12.88□□□□□ -0.35
C11orf54-215ENST00000617482 PACS2Q86VP3 889 aa12.88□□□□□ -0.35
C11orf54-215ENST00000617482 TPH2Q8IWU9 490 aa12.88□□□□□ -0.35
C11orf54-215ENST00000617482 MYCT1Q8N699 235 aa12.88□□□□□ -0.35
C11orf54-215ENST00000617482 WHAMMQ8TF30 809 aa12.88□□□□□ -0.35
C11orf54-215ENST00000617482 SCFD2Q8WU76 684 aa12.88□□□□□ -0.35
C11orf54-215ENST00000617482 ZDHHC15Q96MV8 337 aa12.88□□□□□ -0.35
C11orf54-215ENST00000617482 PLAAQ9Y263 795 aa12.88□□□□□ -0.35
C11orf54-215ENST00000617482 FAM169AQ9Y6X4 670 aa12.88□□□□□ -0.35
C11orf54-215ENST00000617482 ARFGEF1Q9Y6D6 1849 aa12.87□□□□□ -0.35
C11orf54-215ENST00000617482 DDX3XO00571 662 aaKnown RBP eCLIP12.87□□□□□ -0.359e-8■■■□□ 15.2
C11orf54-215ENST00000617482 OPLAHO14841 1288 aa12.87□□□□□ -0.35
C11orf54-215ENST00000617482 SART1O43290 800 aaKnown RBP12.87□□□□□ -0.35
C11orf54-215ENST00000617482 TGFB1I1O43294 461 aa12.87□□□□□ -0.35
C11orf54-215ENST00000617482 H2AFZP0C0S5 128 aa12.87□□□□□ -0.35
C11orf54-215ENST00000617482 ITGA4P13612 1032 aa12.87□□□□□ -0.35
C11orf54-215ENST00000617482 JAG1P78504 1218 aa12.87□□□□□ -0.35
C11orf54-215ENST00000617482 CEP85LQ5SZL2 805 aa12.87□□□□□ -0.35
C11orf54-215ENST00000617482 RINT1Q6NUQ1 792 aa12.87□□□□□ -0.35
C11orf54-215ENST00000617482 H2AFVQ71UI9 128 aa12.87□□□□□ -0.35
C11orf54-215ENST00000617482 DAAM2Q86T65 1068 aa12.87□□□□□ -0.35
C11orf54-215ENST00000617482 MREGQ8N565 214 aa12.87□□□□□ -0.35
C11orf54-215ENST00000617482 PPM1EQ8WY54 764 aa12.87□□□□□ -0.35
C11orf54-215ENST00000617482 PBKQ96KB5 322 aa12.87□□□□□ -0.35
C11orf54-215ENST00000617482 METTL14Q9HCE5 456 aaKnown RBP12.87□□□□□ -0.35
C11orf54-215ENST00000617482 MYH4Q9Y623 1939 aa12.87□□□□□ -0.35
C11orf54-215ENST00000617482 KRIT1O00522 736 aa12.87□□□□□ -0.35
C11orf54-215ENST00000617482 NDUFAB1O14561 156 aa12.87□□□□□ -0.35
C11orf54-215ENST00000617482 FOSP01100 380 aaPredicted RBP12.87□□□□□ -0.35
C11orf54-215ENST00000617482 PRKCIP41743 596 aa12.87□□□□□ -0.35
C11orf54-215ENST00000617482 VASPP50552 380 aaPredicted RBP12.87□□□□□ -0.35
C11orf54-215ENST00000617482 JAM2P57087 298 aa12.87□□□□□ -0.35
C11orf54-215ENST00000617482 COG2Q14746 738 aa12.87□□□□□ -0.35
C11orf54-215ENST00000617482 ABCB5Q2M3G0 1257 aa12.87□□□□□ -0.35
C11orf54-215ENST00000617482 VPS36Q86VN1 386 aa12.87□□□□□ -0.35
C11orf54-215ENST00000617482 OR2W6PQ8NHA6 318 aa12.87□□□□□ -0.35
C11orf54-215ENST00000617482 ACTRT1Q8TDG2 376 aa12.87□□□□□ -0.35
C11orf54-215ENST00000617482 ISCUQ9H1K1 167 aa12.87□□□□□ -0.35
C11orf54-215ENST00000617482 AMACRQ9UHK6 382 aa12.87□□□□□ -0.35
C11orf54-215ENST00000617482 NOC2LQ9Y3T9 749 aaKnown RBP12.87□□□□□ -0.35
C11orf54-215ENST00000617482 PGRMC1O00264 195 aaKnown RBP12.86□□□□□ -0.35
C11orf54-215ENST00000617482 CES2O00748 559 aa12.86□□□□□ -0.35
C11orf54-215ENST00000617482 EYA4O95677 639 aa12.86□□□□□ -0.35
C11orf54-215ENST00000617482 NR1D1P20393 614 aa12.86□□□□□ -0.35
C11orf54-215ENST00000617482 ECHS1P30084 290 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms