RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 ACAD11Q709F0 780 aa4.9□□□□□ -1.63
CHD9-221ENST00000615216 USP17L1Q7RTZ2 530 aa4.9□□□□□ -1.63
CHD9-221ENST00000615216 RNF139Q8WU17 664 aa4.9□□□□□ -1.63
CHD9-221ENST00000615216 COA1Q9GZY4 146 aa4.9□□□□□ -1.63
CHD9-221ENST00000615216 MRPL46Q9H2W6 279 aaKnown RBP4.9□□□□□ -1.63
CHD9-221ENST00000615216 UBN1Q9NPG3 1134 aa4.9□□□□□ -1.63
CHD9-221ENST00000615216 INO80B-WBP1J3KQ70 363 aa4.9□□□□□ -1.63
CHD9-221ENST00000615216 SORBS3O60504 671 aa4.9□□□□□ -1.63
CHD9-221ENST00000615216 FTCDO95954 541 aa4.9□□□□□ -1.63
CHD9-221ENST00000615216 CA4P22748 312 aa4.9□□□□□ -1.63
CHD9-221ENST00000615216 PRELPP51888 382 aa4.9□□□□□ -1.63
CHD9-221ENST00000615216 PRKG1Q13976 671 aa4.9□□□□□ -1.63
CHD9-221ENST00000615216 ERFEQ4G0M1 354 aa4.9□□□□□ -1.63
CHD9-221ENST00000615216 FAM196AQ6ZSG2 479 aa4.9□□□□□ -1.63
CHD9-221ENST00000615216 CCNYQ8ND76 341 aa4.9□□□□□ -1.63
CHD9-221ENST00000615216 MCPH1Q8NEM0 835 aa4.9□□□□□ -1.63
CHD9-221ENST00000615216 GDAP1Q8TB36 358 aa4.9□□□□□ -1.63
CHD9-221ENST00000615216 HEXIM2Q96MH2 286 aaKnown RBP4.9□□□□□ -1.63
CHD9-221ENST00000615216 LRRC37BQ96QE4 947 aa4.9□□□□□ -1.63
CHD9-221ENST00000615216 INO80BQ9C086 356 aaPredicted RBP4.9□□□□□ -1.63
CHD9-221ENST00000615216 ANTXR1Q9H6X2 564 aa4.9□□□□□ -1.63
CHD9-221ENST00000615216 TMEM247A6NEH6 219 aa4.9□□□□□ -1.63
CHD9-221ENST00000615216 PFASO15067 1338 aa4.9□□□□□ -1.63
CHD9-221ENST00000615216 PFDN1O60925 122 aa4.9□□□□□ -1.63
CHD9-221ENST00000615216 MCF2P10911 925 aa4.9□□□□□ -1.63
CHD9-221ENST00000615216 PAPOLAP51003 745 aaKnown RBP4.9□□□□□ -1.63
CHD9-221ENST00000615216 TAF11Q15544 211 aa4.9□□□□□ -1.63
CHD9-221ENST00000615216 C4orf50Q6ZRC1 276 aa4.9□□□□□ -1.63
CHD9-221ENST00000615216 DGKHQ86XP1 1220 aa4.9□□□□□ -1.63
CHD9-221ENST00000615216 RAD54LQ92698 747 aa4.9□□□□□ -1.63
CHD9-221ENST00000615216 KLHL29Q96CT2 875 aa4.9□□□□□ -1.63
CHD9-221ENST00000615216 CCDC138Q96M89 665 aa4.9□□□□□ -1.63
CHD9-221ENST00000615216 CALN1Q9BXU9 219 aa4.9□□□□□ -1.63
CHD9-221ENST00000615216 ASNSD1Q9NWL6 643 aa4.9□□□□□ -1.63
CHD9-221ENST00000615216 KPNA7A9QM74 516 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 PPP1R12AO14974 1030 aaPredicted RBP4.89□□□□□ -1.63
CHD9-221ENST00000615216 TMCC1O94876 653 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 ZKSCAN8Q15776 578 aaPredicted RBP4.89□□□□□ -1.63
CHD9-221ENST00000615216 PFKFB3Q16875 520 aaPredicted RBP4.89□□□□□ -1.63
CHD9-221ENST00000615216 KRT80Q6KB66 452 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 CLEC4GQ6UXB4 293 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 WNT8AQ9H1J5 351 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 SLC13A4Q9UKG4 626 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 TRPC5Q9UL62 973 aaPredicted RBP4.89□□□□□ -1.63
CHD9-221ENST00000615216 ABCB11O95342 1321 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 CDHR2Q9BYE9 1310 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 KRT38O76015 456 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 ECM2O94769 699 aaPredicted RBP4.89□□□□□ -1.63
CHD9-221ENST00000615216 CDK8P49336 464 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 MDM2Q00987 491 aaPredicted RBP4.89□□□□□ -1.63
CHD9-221ENST00000615216 PROSER3Q2NL68 480 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 SYDE1Q6ZW31 735 aaPredicted RBP4.89□□□□□ -1.63
CHD9-221ENST00000615216 ENOSF1Q7L5Y1 443 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 SCG3Q8WXD2 468 aaKnown RBP4.89□□□□□ -1.63
CHD9-221ENST00000615216 VPS39Q96JC1 886 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 MAGEB5Q9BZ81 275 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 NOP53Q9NZM5 478 aaKnown RBP4.89□□□□□ -1.63
CHD9-221ENST00000615216 GOLGA8SH3BPF8 625 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 FGGP02679 453 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 PNMA6AP0CW24 399 aaPredicted RBP4.89□□□□□ -1.63
CHD9-221ENST00000615216 COPB2P35606 906 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 MKRN3Q13064 507 aaKnown RBP4.89□□□□□ -1.63
CHD9-221ENST00000615216 GRAPQ13588 217 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 RC3H1Q5TC82 1133 aaKnown RBP4.89□□□□□ -1.63
CHD9-221ENST00000615216 RTKN2Q8IZC4 609 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 GRAPLQ8TC17 118 aaPredicted RBP4.89□□□□□ -1.63
CHD9-221ENST00000615216 MTBPQ96DY7 904 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 PCDHB6Q9Y5E3 794 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 NR3C1P04150 777 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 DDX5P17844 614 aaKnown RBP4.89□□□□□ -1.63
CHD9-221ENST00000615216 MX2P20592 715 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 FAM133BQ5BKY9 247 aaKnown RBP4.89□□□□□ -1.63
CHD9-221ENST00000615216 USPL1Q5W0Q7 1092 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 ERICH1Q86X53 443 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 CXorf38Q8TB03 319 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 TRIM55Q9BYV6 548 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 OSBPL5Q9H0X9 879 aaPredicted RBP4.89□□□□□ -1.63
CHD9-221ENST00000615216 TEKT2Q9UIF3 430 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 OVOS2A0A0G2JMS6 1433 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 OVOS2A0A0J9YW53 1432 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 OVOS2Q6IE36 1432 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 ZBTB5O15062 677 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 PALMO75781 387 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 MMEP08473 750 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 ESRRAP11474 423 aaPredicted RBP4.89□□□□□ -1.63
CHD9-221ENST00000615216 EEF1DP29692 281 aaKnown RBP4.89□□□□□ -1.63
CHD9-221ENST00000615216 SFNP31947 248 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 PHKA2P46019 1235 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 HSPA2P54652 639 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 DYNLT1P63172 113 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 SF3A3Q12874 501 aaKnown RBP eCLIP4.89□□□□□ -1.63
CHD9-221ENST00000615216 TBC1D9BQ66K14 1250 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 EPM2AIP1Q7L775 607 aaPredicted RBP4.89□□□□□ -1.63
CHD9-221ENST00000615216 FAF2Q96CS3 445 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 PUS3Q9BZE2 481 aaKnown RBP4.89□□□□□ -1.63
CHD9-221ENST00000615216 CLIC2O15247 247 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 HNRNPCL1O60812 293 aaKnown RBP4.89□□□□□ -1.63
CHD9-221ENST00000615216 GNAT1P11488 350 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 PPARDQ03181 441 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 GOLGA8FQ08AF8 430 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms