RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 ZNF484Q5JVG2 852 aa20.3■□□□□ 0.84
SMN2-213ENST00000614240 SWSAP1Q6NVH7 229 aa20.3■□□□□ 0.84
SMN2-213ENST00000614240 ABHD15Q6UXT9 468 aa20.3■□□□□ 0.84
SMN2-213ENST00000614240 CRIPAKQ8N1N5 446 aa20.3■□□□□ 0.84
SMN2-213ENST00000614240 MICAL1Q8TDZ2 1067 aa20.3■□□□□ 0.84
SMN2-213ENST00000614240 POF1BQ8WVV4 589 aa20.3■□□□□ 0.84
SMN2-213ENST00000614240 TMX1Q9H3N1 280 aa20.3■□□□□ 0.84
SMN2-213ENST00000614240 TCEAL9Q9UHQ7 104 aa20.3■□□□□ 0.84
SMN2-213ENST00000614240 IGKV6D-21A0A0A0MT36 114 aa20.29■□□□□ 0.84
SMN2-213ENST00000614240 TBX10O75333 385 aa20.29■□□□□ 0.84
SMN2-213ENST00000614240 DNAJB1P25685 340 aa20.29■□□□□ 0.84
SMN2-213ENST00000614240 IRS1P35568 1242 aa20.29■□□□□ 0.84
SMN2-213ENST00000614240 CLK2P49760 499 aaKnown RBP20.29■□□□□ 0.84
SMN2-213ENST00000614240 ADCK5Q3MIX3 580 aa20.29■□□□□ 0.84
SMN2-213ENST00000614240 TRMT1LQ7Z2T5 733 aaKnown RBP20.29■□□□□ 0.84
SMN2-213ENST00000614240 RASEFQ8IZ41 740 aa20.29■□□□□ 0.84
SMN2-213ENST00000614240 PPP1R16BQ96T49 567 aa20.29■□□□□ 0.84
SMN2-213ENST00000614240 ZNF577Q9BSK1 485 aa20.29■□□□□ 0.84
SMN2-213ENST00000614240 AAASQ9NRG9 546 aa20.29■□□□□ 0.84
SMN2-213ENST00000614240 NOC2LQ9Y3T9 749 aaKnown RBP20.29■□□□□ 0.84
SMN2-213ENST00000614240 PCDHB12Q9Y5F1 795 aa20.29■□□□□ 0.84
SMN2-213ENST00000614240 CCDC196A0A1B0GTZ2 297 aa20.28■□□□□ 0.84
SMN2-213ENST00000614240 TBKBP1A7MCY6 615 aa20.28■□□□□ 0.84
SMN2-213ENST00000614240 FAM86B1E9PN63 330 aa20.28■□□□□ 0.84
SMN2-213ENST00000614240 IPO5O00410 1097 aaKnown RBP20.28■□□□□ 0.84
SMN2-213ENST00000614240 GPR182O15218 404 aa20.28■□□□□ 0.84
SMN2-213ENST00000614240 HMGB1P09429 215 aaKnown RBP20.28■□□□□ 0.84
SMN2-213ENST00000614240 FAM86B2P0C5J1 330 aa20.28■□□□□ 0.84
SMN2-213ENST00000614240 CDC27P30260 824 aa20.28■□□□□ 0.84
SMN2-213ENST00000614240 NRIP1P48552 1158 aa20.28■□□□□ 0.84
SMN2-213ENST00000614240 TSGA10IPQ3SY00 556 aa20.28■□□□□ 0.84
SMN2-213ENST00000614240 FAM43BQ6ZT52 329 aaPredicted RBP20.28■□□□□ 0.84
SMN2-213ENST00000614240 RBM23Q86U06 439 aaKnown RBP20.28■□□□□ 0.84
SMN2-213ENST00000614240 CCDC60Q8IWA6 550 aaPredicted RBP20.28■□□□□ 0.84
SMN2-213ENST00000614240 KIAA0319LQ8IZA0 1049 aa20.28■□□□□ 0.84
SMN2-213ENST00000614240 ADAM2Q99965 735 aa20.28■□□□□ 0.84
SMN2-213ENST00000614240 CDHR5Q9HBB8 845 aa20.28■□□□□ 0.84
SMN2-213ENST00000614240 ERVK-5Q9HDB9 667 aa20.28■□□□□ 0.84
SMN2-213ENST00000614240 C1orf112Q9NSG2 853 aa20.28■□□□□ 0.84
SMN2-213ENST00000614240 COL1A2P08123 1366 aa20.28■□□□□ 0.84
SMN2-213ENST00000614240 METAP2P50579 478 aaKnown RBP eCLIP20.27■□□□□ 0.84
SMN2-213ENST00000614240 RCAN1P53805 252 aa20.27■□□□□ 0.84
SMN2-213ENST00000614240 PFKFB3Q16875 520 aaPredicted RBP20.27■□□□□ 0.84
SMN2-213ENST00000614240 MCTP2Q6DN12 878 aa20.27■□□□□ 0.84
SMN2-213ENST00000614240 ADGRD2Q7Z7M1 963 aa20.27■□□□□ 0.84
SMN2-213ENST00000614240 METTL13Q8N6R0 699 aa20.27■□□□□ 0.84
SMN2-213ENST00000614240 EFHBQ8N7U6 833 aa20.27■□□□□ 0.84
SMN2-213ENST00000614240 C6orf50Q9HD87 102 aa20.27■□□□□ 0.84
SMN2-213ENST00000614240 FAM217BQ9NTX9 383 aaPredicted RBP20.27■□□□□ 0.84
SMN2-213ENST00000614240 TBC1D22BQ9NU19 505 aa20.27■□□□□ 0.84
SMN2-213ENST00000614240 ST3GAL5Q9UNP4 418 aa20.27■□□□□ 0.84
SMN2-213ENST00000614240 MGEA5O60502 916 aa20.26■□□□□ 0.83
SMN2-213ENST00000614240 CYP3A4P08684 503 aa20.26■□□□□ 0.83
SMN2-213ENST00000614240 ADD1P35611 737 aaKnown RBP20.26■□□□□ 0.83
SMN2-213ENST00000614240 KIZQ2M2Z5 673 aa20.26■□□□□ 0.83
SMN2-213ENST00000614240 SLC24A5Q71RS6 500 aa20.26■□□□□ 0.83
SMN2-213ENST00000614240 SKAP1Q86WV1 359 aa20.26■□□□□ 0.83
SMN2-213ENST00000614240 CCDC12Q8WUD4 166 aaPredicted RBP20.26■□□□□ 0.83
SMN2-213ENST00000614240 BBXQ8WY36 941 aaPredicted RBP20.26■□□□□ 0.83
SMN2-213ENST00000614240 TLE6Q9H808 572 aa20.26■□□□□ 0.83
SMN2-213ENST00000614240 RGS18Q9NS28 235 aa20.26■□□□□ 0.83
SMN2-213ENST00000614240 SAMM50Q9Y512 469 aa20.26■□□□□ 0.83
SMN2-213ENST00000614240 DHX15O43143 795 aaKnown RBP20.25■□□□□ 0.83
SMN2-213ENST00000614240 CDC45O75419 566 aa20.25■□□□□ 0.83
SMN2-213ENST00000614240 PSAPP07602 524 aa20.25■□□□□ 0.83
SMN2-213ENST00000614240 CRYBB1P53674 252 aaPredicted RBP20.25■□□□□ 0.83
SMN2-213ENST00000614240 SETQ01105 290 aaPredicted RBP20.25■□□□□ 0.83
SMN2-213ENST00000614240 AKAP17AQ02040 695 aaKnown RBP20.25■□□□□ 0.83
SMN2-213ENST00000614240 ZNF746Q6NUN9 644 aaPredicted RBP20.25■□□□□ 0.83
SMN2-213ENST00000614240 RNF135Q8IUD6 432 aa20.25■□□□□ 0.83
SMN2-213ENST00000614240 THNSL1Q8IYQ7 743 aa20.25■□□□□ 0.83
SMN2-213ENST00000614240 REXO1Q8N1G1 1221 aaKnown RBP20.25■□□□□ 0.83
SMN2-213ENST00000614240 TMEM40Q8WWA1 233 aa20.25■□□□□ 0.83
SMN2-213ENST00000614240 OSMRQ99650 979 aa20.25■□□□□ 0.83
SMN2-213ENST00000614240 ATP6V0A4Q9HBG4 840 aa20.25■□□□□ 0.83
SMN2-213ENST00000614240 MUTYHQ9UIF7 546 aa20.25■□□□□ 0.83
SMN2-213ENST00000614240 IGLV3-22A0A075B6J6 115 aa20.24■□□□□ 0.83
SMN2-213ENST00000614240 ATP4AP20648 1035 aa20.24■□□□□ 0.83
SMN2-213ENST00000614240 GNA11P29992 359 aa20.24■□□□□ 0.83
SMN2-213ENST00000614240 APOBRQ0VD83 1088 aa20.24■□□□□ 0.83
SMN2-213ENST00000614240 PRR16Q569H4 304 aa20.24■□□□□ 0.83
SMN2-213ENST00000614240 FAM102BQ5T8I3 360 aa20.24■□□□□ 0.83
SMN2-213ENST00000614240 MSLNLQ96KJ4 702 aa20.24■□□□□ 0.83
SMN2-213ENST00000614240 ZMYND12Q9H0C1 365 aa20.24■□□□□ 0.83
SMN2-213ENST00000614240 CLEC1BQ9P126 229 aa20.24■□□□□ 0.83
SMN2-213ENST00000614240 CEP131Q9UPN4 1083 aa20.24■□□□□ 0.83
SMN2-213ENST00000614240 PCDHGC5Q9Y5F6 944 aa20.24■□□□□ 0.83
SMN2-213ENST00000614240 PCDHA10Q9Y5I2 948 aa20.24■□□□□ 0.83
SMN2-213ENST00000614240 ESYT2A0FGR8 921 aa20.23■□□□□ 0.83
SMN2-213ENST00000614240 ZBTB42B2RXF5 422 aa20.23■□□□□ 0.83
SMN2-213ENST00000614240 C9IYK1 514 aa20.23■□□□□ 0.83
SMN2-213ENST00000614240 C22orf31O95567 290 aa20.23■□□□□ 0.83
SMN2-213ENST00000614240 EYA4O95677 639 aa20.23■□□□□ 0.83
SMN2-213ENST00000614240 VTNP04004 478 aa20.23■□□□□ 0.83
SMN2-213ENST00000614240 CPA1P15085 419 aa20.23■□□□□ 0.83
SMN2-213ENST00000614240 UBE3AQ05086 875 aa20.23■□□□□ 0.83
SMN2-213ENST00000614240 Q6ZUG5 572 aa20.23■□□□□ 0.83
SMN2-213ENST00000614240 CENPQQ7L2Z9 268 aaPredicted RBP20.23■□□□□ 0.83
SMN2-213ENST00000614240 SMAP1Q8IYB5 467 aaPredicted RBP20.23■□□□□ 0.83
SMN2-213ENST00000614240 BRF1Q92994 677 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms