RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 C8orf34Q49A92 452 aa19.93■□□□□ 0.78
SHKBP1-203ENST00000594298 ABHD15Q6UXT9 468 aa19.93■□□□□ 0.78
SHKBP1-203ENST00000594298 ZNF274Q96GC6 653 aaPredicted RBP19.93■□□□□ 0.78
SHKBP1-203ENST00000594298 TMX1Q9H3N1 280 aa19.93■□□□□ 0.78
SHKBP1-203ENST00000594298 FAM217BQ9NTX9 383 aaPredicted RBP19.93■□□□□ 0.78
SHKBP1-203ENST00000594298 COL1A2P08123 1366 aa19.93■□□□□ 0.78
SHKBP1-203ENST00000594298 TBX10O75333 385 aa19.92■□□□□ 0.78
SHKBP1-203ENST00000594298 SEC24BO95487 1268 aa19.92■□□□□ 0.78
SHKBP1-203ENST00000594298 ITGB1P05556 798 aa19.92■□□□□ 0.78
SHKBP1-203ENST00000594298 KLRC1P26715 233 aa19.92■□□□□ 0.78
SHKBP1-203ENST00000594298 ADD1P35611 737 aaKnown RBP19.92■□□□□ 0.78
SHKBP1-203ENST00000594298 AKAP17AQ02040 695 aaKnown RBP19.92■□□□□ 0.78
SHKBP1-203ENST00000594298 ADAM15Q13444 863 aa19.92■□□□□ 0.78
SHKBP1-203ENST00000594298 SMAD4Q13485 552 aaKnown RBP19.92■□□□□ 0.78
SHKBP1-203ENST00000594298 TOB2Q14106 344 aaPredicted RBP19.92■□□□□ 0.78
SHKBP1-203ENST00000594298 FAM160B1Q5W0V3 765 aa19.92■□□□□ 0.78
SHKBP1-203ENST00000594298 SPPL3Q8TCT6 385 aa19.92■□□□□ 0.78
SHKBP1-203ENST00000594298 ATP8B4Q8TF62 1192 aa19.92■□□□□ 0.78
SHKBP1-203ENST00000594298 CRYGNQ8WXF5 182 aa19.92■□□□□ 0.78
SHKBP1-203ENST00000594298 PPP2R3CQ969Q6 453 aa19.92■□□□□ 0.78
SHKBP1-203ENST00000594298 POP1Q99575 1024 aaKnown RBP19.92■□□□□ 0.78
SHKBP1-203ENST00000594298 TMEM260Q9NX78 707 aa19.92■□□□□ 0.78
SHKBP1-203ENST00000594298 NID2Q14112 1375 aa19.92■□□□□ 0.78
SHKBP1-203ENST00000594298 FAM86B1E9PN63 330 aa19.91■□□□□ 0.78
SHKBP1-203ENST00000594298 CYP3A4P08684 503 aa19.91■□□□□ 0.78
SHKBP1-203ENST00000594298 FAM86B2P0C5J1 330 aa19.91■□□□□ 0.78
SHKBP1-203ENST00000594298 DNAJB1P25685 340 aa19.91■□□□□ 0.78
SHKBP1-203ENST00000594298 GTF2F1P35269 517 aaKnown RBP eCLIP19.91■□□□□ 0.781e-6■■■■■ 54.6
SHKBP1-203ENST00000594298 ZNF76P36508 570 aa19.91■□□□□ 0.78
SHKBP1-203ENST00000594298 SARSP49591 514 aaKnown RBP19.91■□□□□ 0.78
SHKBP1-203ENST00000594298 CPLX2Q6PUV4 134 aaKnown RBP19.91■□□□□ 0.78
SHKBP1-203ENST00000594298 KLHL23Q8NBE8 558 aa19.91■□□□□ 0.78
SHKBP1-203ENST00000594298 ERVK-5Q9HDB9 667 aa19.91■□□□□ 0.78
SHKBP1-203ENST00000594298 CD207Q9UJ71 328 aa19.91■□□□□ 0.78
SHKBP1-203ENST00000594298 IGLV3-22A0A075B6J6 115 aa19.9■□□□□ 0.78
SHKBP1-203ENST00000594298 BACH1O14867 736 aa19.9■□□□□ 0.78
SHKBP1-203ENST00000594298 LINC01565O15544 149 aa19.9■□□□□ 0.78
SHKBP1-203ENST00000594298 DHX15O43143 795 aaKnown RBP19.9■□□□□ 0.78
SHKBP1-203ENST00000594298 IRS1P35568 1242 aa19.9■□□□□ 0.78
SHKBP1-203ENST00000594298 PFKFB3Q16875 520 aaPredicted RBP19.9■□□□□ 0.78
SHKBP1-203ENST00000594298 CSPP1Q1MSJ5 1256 aa19.9■□□□□ 0.78
SHKBP1-203ENST00000594298 PAN2Q504Q3 1202 aaKnown RBP19.9■□□□□ 0.78
SHKBP1-203ENST00000594298 ZNF484Q5JVG2 852 aa19.9■□□□□ 0.78
SHKBP1-203ENST00000594298 ODR4Q5SWX8 454 aa19.9■□□□□ 0.78
SHKBP1-203ENST00000594298 CCDC60Q8IWA6 550 aaPredicted RBP19.9■□□□□ 0.78
SHKBP1-203ENST00000594298 KIAA0319LQ8IZA0 1049 aa19.9■□□□□ 0.78
SHKBP1-203ENST00000594298 MSLNLQ96KJ4 702 aa19.9■□□□□ 0.78
SHKBP1-203ENST00000594298 IGFLR1Q9H665 355 aa19.9■□□□□ 0.78
SHKBP1-203ENST00000594298 UPF2Q9HAU5 1272 aaKnown RBP19.9■□□□□ 0.78
SHKBP1-203ENST00000594298 ZNF302Q9NR11 478 aa19.9■□□□□ 0.78
SHKBP1-203ENST00000594298 C1orf112Q9NSG2 853 aa19.9■□□□□ 0.78
SHKBP1-203ENST00000594298 RNF216Q9NWF9 866 aaPredicted RBP19.9■□□□□ 0.78
SHKBP1-203ENST00000594298 LRFN2Q9ULH4 789 aa19.9■□□□□ 0.78
SHKBP1-203ENST00000594298 ESYT2A0FGR8 921 aa19.89■□□□□ 0.77
SHKBP1-203ENST00000594298 DDX39AO00148 427 aaKnown RBP19.89■□□□□ 0.77
SHKBP1-203ENST00000594298 CPLX1O14810 134 aa19.89■□□□□ 0.77
SHKBP1-203ENST00000594298 PRPF3O43395 683 aaKnown RBP19.89■□□□□ 0.77
SHKBP1-203ENST00000594298 EYA4O95677 639 aa19.89■□□□□ 0.77
SHKBP1-203ENST00000594298 NFX1Q12986 1120 aaKnown RBP19.89■□□□□ 0.77
SHKBP1-203ENST00000594298 CLUL1Q15846 466 aa19.89■□□□□ 0.77
SHKBP1-203ENST00000594298 TMEM266Q2M3C6 531 aa19.89■□□□□ 0.77
SHKBP1-203ENST00000594298 ATG2AQ2TAZ0 1938 aa19.89■□□□□ 0.77
SHKBP1-203ENST00000594298 MCTP2Q6DN12 878 aa19.89■□□□□ 0.77
SHKBP1-203ENST00000594298 MIS18BP1Q6P0N0 1132 aa19.89■□□□□ 0.77
SHKBP1-203ENST00000594298 PDXDC2PQ6P474 469 aa19.89■□□□□ 0.77
SHKBP1-203ENST00000594298 PLA2G4DQ86XP0 818 aa19.89■□□□□ 0.77
SHKBP1-203ENST00000594298 EFHBQ8N7U6 833 aa19.89■□□□□ 0.77
SHKBP1-203ENST00000594298 POF1BQ8WVV4 589 aa19.89■□□□□ 0.77
SHKBP1-203ENST00000594298 TMEM40Q8WWA1 233 aa19.89■□□□□ 0.77
SHKBP1-203ENST00000594298 RGS18Q9NS28 235 aa19.89■□□□□ 0.77
SHKBP1-203ENST00000594298 PCDHB7Q9Y5E2 793 aa19.89■□□□□ 0.77
SHKBP1-203ENST00000594298 ZBTB42B2RXF5 422 aa19.88■□□□□ 0.77
SHKBP1-203ENST00000594298 IPO5O00410 1097 aaKnown RBP19.88■□□□□ 0.77
SHKBP1-203ENST00000594298 GPR182O15218 404 aa19.88■□□□□ 0.77
SHKBP1-203ENST00000594298 MGEA5O60502 916 aa19.88■□□□□ 0.77
SHKBP1-203ENST00000594298 RPS6KA5O75582 802 aa19.88■□□□□ 0.77
SHKBP1-203ENST00000594298 CSPG5O95196 566 aa19.88■□□□□ 0.77
SHKBP1-203ENST00000594298 IFNAR1P17181 557 aa19.88■□□□□ 0.77
SHKBP1-203ENST00000594298 ATP4AP20648 1035 aa19.88■□□□□ 0.77
SHKBP1-203ENST00000594298 NDUFV1P49821 464 aa19.88■□□□□ 0.77
SHKBP1-203ENST00000594298 CCT2P78371 535 aaKnown RBP19.88■□□□□ 0.77
SHKBP1-203ENST00000594298 SLC24A5Q71RS6 500 aa19.88■□□□□ 0.77
SHKBP1-203ENST00000594298 ADGRD2Q7Z7M1 963 aa19.88■□□□□ 0.77
SHKBP1-203ENST00000594298 CCDC12Q8WUD4 166 aaPredicted RBP19.88■□□□□ 0.77
SHKBP1-203ENST00000594298 ZMYND12Q9H0C1 365 aa19.88■□□□□ 0.77
SHKBP1-203ENST00000594298 CDHR5Q9HBB8 845 aa19.88■□□□□ 0.77
SHKBP1-203ENST00000594298 TBC1D22BQ9NU19 505 aa19.88■□□□□ 0.77
SHKBP1-203ENST00000594298 GINS2Q9Y248 185 aa19.88■□□□□ 0.77
SHKBP1-203ENST00000594298 NOC2LQ9Y3T9 749 aaKnown RBP19.88■□□□□ 0.77
SHKBP1-203ENST00000594298 MAFBQ9Y5Q3 323 aaPredicted RBP19.88■□□□□ 0.77
SHKBP1-203ENST00000594298 GTF3C3Q9Y5Q9 886 aa19.88■□□□□ 0.77
SHKBP1-203ENST00000594298 C9IYK1 514 aa19.87■□□□□ 0.77
SHKBP1-203ENST00000594298 C22orf31O95567 290 aa19.87■□□□□ 0.77
SHKBP1-203ENST00000594298 GATMP50440 423 aa19.87■□□□□ 0.77
SHKBP1-203ENST00000594298 NEK4P51957 841 aa19.87■□□□□ 0.77
SHKBP1-203ENST00000594298 CRYBB1P53674 252 aaPredicted RBP19.87■□□□□ 0.77
SHKBP1-203ENST00000594298 SETQ01105 290 aaPredicted RBP19.87■□□□□ 0.77
SHKBP1-203ENST00000594298 UBE3AQ05086 875 aa19.87■□□□□ 0.77
SHKBP1-203ENST00000594298 COASYQ13057 564 aa19.87■□□□□ 0.77
SHKBP1-203ENST00000594298 HERC4Q5GLZ8 1057 aaPredicted RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms