RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 A0A1B0GTH6 734 aa12.62□□□□□ -0.39
SMAD4-205ENST00000588745 RBM47A0AV96 593 aaKnown RBP12.62□□□□□ -0.39
SMAD4-205ENST00000588745 KCNJ18B7U540 433 aa12.62□□□□□ -0.39
SMAD4-205ENST00000588745 TXNP10599 105 aaKnown RBP12.62□□□□□ -0.39
SMAD4-205ENST00000588745 EEF1GP26641 437 aaKnown RBP12.62□□□□□ -0.39
SMAD4-205ENST00000588745 TCF7P36402 384 aaPredicted RBP12.62□□□□□ -0.39
SMAD4-205ENST00000588745 CASP5P51878 434 aa12.62□□□□□ -0.39
SMAD4-205ENST00000588745 NPEPPSP55786 919 aa12.62□□□□□ -0.39
SMAD4-205ENST00000588745 CRHR2Q13324 411 aa12.62□□□□□ -0.39
SMAD4-205ENST00000588745 KCNJ12Q14500 433 aa12.62□□□□□ -0.39
SMAD4-205ENST00000588745 BMT2Q1RMZ1 405 aa12.62□□□□□ -0.39
SMAD4-205ENST00000588745 XKR3Q5GH77 459 aa12.62□□□□□ -0.39
SMAD4-205ENST00000588745 TCP11X2Q5H9J9 407 aa12.62□□□□□ -0.39
SMAD4-205ENST00000588745 CELF3Q5SZQ8 465 aaKnown RBP12.62□□□□□ -0.39
SMAD4-205ENST00000588745 MORN1Q5T089 497 aa12.62□□□□□ -0.39
SMAD4-205ENST00000588745 FAM160B1Q5W0V3 765 aa12.62□□□□□ -0.39
SMAD4-205ENST00000588745 FAM114A1Q8IWE2 563 aa12.62□□□□□ -0.39
SMAD4-205ENST00000588745 DAW1Q8N136 415 aa12.62□□□□□ -0.39
SMAD4-205ENST00000588745 MSL3Q8N5Y2 521 aaKnown RBP12.62□□□□□ -0.39
SMAD4-205ENST00000588745 MYCT1Q8N699 235 aa12.62□□□□□ -0.39
SMAD4-205ENST00000588745 AFAP1L1Q8TED9 768 aa12.62□□□□□ -0.39
SMAD4-205ENST00000588745 SEPT1Q8WYJ6 367 aa12.62□□□□□ -0.39
SMAD4-205ENST00000588745 NAP1L5Q96NT1 182 aaPredicted RBP12.62□□□□□ -0.39
SMAD4-205ENST00000588745 ZIC5Q96T25 663 aa12.62□□□□□ -0.39
SMAD4-205ENST00000588745 SRRTQ9BXP5 876 aaKnown RBP12.62□□□□□ -0.39
SMAD4-205ENST00000588745 KATNBL1Q9H079 304 aa12.62□□□□□ -0.39
SMAD4-205ENST00000588745 MRPL44Q9H9J2 332 aaKnown RBP12.62□□□□□ -0.39
SMAD4-205ENST00000588745 SEPT9Q9UHD8 586 aaPredicted RBP12.62□□□□□ -0.39
SMAD4-205ENST00000588745 UBE4BO95155 1302 aa12.62□□□□□ -0.39
SMAD4-205ENST00000588745 SFI1A8K8P3 1242 aa12.61□□□□□ -0.39
SMAD4-205ENST00000588745 NOP56O00567 594 aaKnown RBP12.61□□□□□ -0.39
SMAD4-205ENST00000588745 EIF3DO15371 548 aaKnown RBP eCLIP12.61□□□□□ -0.39
SMAD4-205ENST00000588745 GCNT3O95395 438 aa12.61□□□□□ -0.39
SMAD4-205ENST00000588745 OATP04181 439 aa12.61□□□□□ -0.39
SMAD4-205ENST00000588745 MYBP10242 640 aa12.61□□□□□ -0.39
SMAD4-205ENST00000588745 MAP2K5Q13163 448 aa12.61□□□□□ -0.39
SMAD4-205ENST00000588745 GRM1Q13255 1194 aa12.61□□□□□ -0.39
SMAD4-205ENST00000588745 KRT31Q15323 416 aa12.61□□□□□ -0.39
SMAD4-205ENST00000588745 CYP4F22Q6NT55 531 aa12.61□□□□□ -0.39
SMAD4-205ENST00000588745 TAPT1Q6NXT6 567 aa12.61□□□□□ -0.39
SMAD4-205ENST00000588745 PPP4R3CPQ6ZMV5 832 aa12.61□□□□□ -0.39
SMAD4-205ENST00000588745 IRF2BP1Q8IU81 584 aa12.61□□□□□ -0.39
SMAD4-205ENST00000588745 NELFCDQ8IXH7 590 aa12.61□□□□□ -0.39
SMAD4-205ENST00000588745 DHX37Q8IY37 1157 aaKnown RBP12.61□□□□□ -0.39
SMAD4-205ENST00000588745 NPLOC4Q8TAT6 608 aa12.61□□□□□ -0.39
SMAD4-205ENST00000588745 CEP170P1Q96L14 293 aa12.61□□□□□ -0.39
SMAD4-205ENST00000588745 DRC1Q96MC2 740 aa12.61□□□□□ -0.39
SMAD4-205ENST00000588745 FIZ1Q96SL8 496 aa12.61□□□□□ -0.39
SMAD4-205ENST00000588745 PCYT2Q99447 389 aa12.61□□□□□ -0.39
SMAD4-205ENST00000588745 GPR20Q99678 358 aa12.61□□□□□ -0.39
SMAD4-205ENST00000588745 SH2D3AQ9BRG2 576 aa12.61□□□□□ -0.39
SMAD4-205ENST00000588745 TINF2Q9BSI4 451 aa12.61□□□□□ -0.39
SMAD4-205ENST00000588745 KCTD10Q9H3F6 313 aa12.61□□□□□ -0.39
SMAD4-205ENST00000588745 POLD4Q9HCU8 107 aa12.61□□□□□ -0.39
SMAD4-205ENST00000588745 PDGFCQ9NRA1 345 aa12.61□□□□□ -0.39
SMAD4-205ENST00000588745 INTS13Q9NVM9 706 aa12.61□□□□□ -0.39
SMAD4-205ENST00000588745 MAGEC2Q9UBF1 373 aaPredicted RBP12.61□□□□□ -0.39
SMAD4-205ENST00000588745 EMSYQ7Z589 1322 aa12.61□□□□□ -0.39
SMAD4-205ENST00000588745 LRRC10BA6NIK2 292 aa12.6□□□□□ -0.39
SMAD4-205ENST00000588745 CA12O43570 354 aa12.6□□□□□ -0.39
SMAD4-205ENST00000588745 LGR5O75473 907 aa12.6□□□□□ -0.39
SMAD4-205ENST00000588745 DGAT1O75907 488 aa12.6□□□□□ -0.39
SMAD4-205ENST00000588745 FGFR1OPO95684 399 aaKnown RBP12.6□□□□□ -0.39
SMAD4-205ENST00000588745 SNAI1O95863 264 aaPredicted RBP12.6□□□□□ -0.39
SMAD4-205ENST00000588745 HOXC6P09630 235 aa12.6□□□□□ -0.39
SMAD4-205ENST00000588745 MAPTP10636 758 aaKnown RBP12.6□□□□□ -0.39
SMAD4-205ENST00000588745 ATP4AP20648 1035 aa12.6□□□□□ -0.39
SMAD4-205ENST00000588745 COPB1P53618 953 aaKnown RBP12.6□□□□□ -0.39
SMAD4-205ENST00000588745 NOGQ13253 232 aa12.6□□□□□ -0.39
SMAD4-205ENST00000588745 CCDC144BQ3MJ40 725 aa12.6□□□□□ -0.39
SMAD4-205ENST00000588745 HSDL1Q3SXM5 330 aa12.6□□□□□ -0.39
SMAD4-205ENST00000588745 FILIP1LQ4L180 1135 aa12.6□□□□□ -0.39
SMAD4-205ENST00000588745 ODR4Q5SWX8 454 aa12.6□□□□□ -0.39
SMAD4-205ENST00000588745 LRRC55Q6ZSA7 311 aa12.6□□□□□ -0.39
SMAD4-205ENST00000588745 STXBP4Q6ZWJ1 553 aa12.6□□□□□ -0.39
SMAD4-205ENST00000588745 MAEAQ7L5Y9 396 aa12.6□□□□□ -0.39
SMAD4-205ENST00000588745 TRMT1LQ7Z2T5 733 aaKnown RBP12.6□□□□□ -0.39
SMAD4-205ENST00000588745 TMC6Q7Z403 805 aa12.6□□□□□ -0.39
SMAD4-205ENST00000588745 VSTM4Q8IW00 320 aa12.6□□□□□ -0.39
SMAD4-205ENST00000588745 FAM178BQ8IXR5 827 aa12.6□□□□□ -0.39
SMAD4-205ENST00000588745 ZNF507Q8TCN5 953 aa12.6□□□□□ -0.39
SMAD4-205ENST00000588745 COPS5Q92905 334 aa12.6□□□□□ -0.39
SMAD4-205ENST00000588745 CNOT6LQ96LI5 555 aaKnown RBP12.6□□□□□ -0.39
SMAD4-205ENST00000588745 CYP26B1Q9NR63 512 aa12.6□□□□□ -0.39
SMAD4-205ENST00000588745 LARSQ9P2J5 1176 aaKnown RBP12.6□□□□□ -0.39
SMAD4-205ENST00000588745 MGAMO43451 1857 aa12.6□□□□□ -0.39
SMAD4-205ENST00000588745 RASSF10A6NK89 507 aa12.59□□□□□ -0.39
SMAD4-205ENST00000588745 PRPF6O94906 941 aaKnown RBP12.59□□□□□ -0.39
SMAD4-205ENST00000588745 ALDH1A1P00352 501 aa12.59□□□□□ -0.39
SMAD4-205ENST00000588745 GH1P01241 217 aa12.59□□□□□ -0.39
SMAD4-205ENST00000588745 PLS3P13797 630 aa12.59□□□□□ -0.39
SMAD4-205ENST00000588745 NMT1P30419 496 aaKnown RBP12.59□□□□□ -0.39
SMAD4-205ENST00000588745 ADCYAP1R1P41586 468 aa12.59□□□□□ -0.39
SMAD4-205ENST00000588745 STAT5BP51692 787 aa12.59□□□□□ -0.39
SMAD4-205ENST00000588745 ARHGAP1Q07960 439 aa12.59□□□□□ -0.39
SMAD4-205ENST00000588745 ALCAMQ13740 583 aa12.59□□□□□ -0.39
SMAD4-205ENST00000588745 NR1I3Q14994 352 aa12.59□□□□□ -0.39
SMAD4-205ENST00000588745 KNOP1Q1ED39 458 aaKnown RBP12.59□□□□□ -0.39
SMAD4-205ENST00000588745 EDRF1Q3B7T1 1238 aa12.59□□□□□ -0.39
SMAD4-205ENST00000588745 MTERF2Q49AM1 385 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms