RNA–Protein interactions for RNA: ENST00000586796.1

RETREG3-204, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-204ENST00000586796 CCT6AP40227 531 aaKnown RBP24.01■■□□□ 1.43
RETREG3-204ENST00000586796 EPHB4P54760 987 aa24.01■■□□□ 1.43
RETREG3-204ENST00000586796 NPEPPSP55786 919 aa24.01■■□□□ 1.43
RETREG3-204ENST00000586796 PPIGQ13427 754 aaKnown RBP eCLIP24.01■■□□□ 1.43
RETREG3-204ENST00000586796 PDIA5Q14554 519 aa24.01■■□□□ 1.43
RETREG3-204ENST00000586796 RSPH3Q86UC2 560 aa24.01■■□□□ 1.43
RETREG3-204ENST00000586796 CATSPER3Q86XQ3 398 aa24.01■■□□□ 1.43
RETREG3-204ENST00000586796 TFIP11Q9UBB9 837 aaKnown RBP24.01■■□□□ 1.43
RETREG3-204ENST00000586796 KAT6AQ92794 2004 aa24■■□□□ 1.43
RETREG3-204ENST00000586796 RSPH10B2B2RC85 870 aa24■■□□□ 1.43
RETREG3-204ENST00000586796 RSPH10BP0C881 870 aa24■■□□□ 1.43
RETREG3-204ENST00000586796 SPATA31C1P0DKV0 1188 aa24■■□□□ 1.43
RETREG3-204ENST00000586796 RBL2Q08999 1139 aa24■■□□□ 1.43
RETREG3-204ENST00000586796 TBC1D8BQ0IIM8 1120 aa24■■□□□ 1.43
RETREG3-204ENST00000586796 TMEM62Q0P6H9 643 aa24■■□□□ 1.43
RETREG3-204ENST00000586796 ARL6IP4Q66PJ3 421 aaKnown RBP24■■□□□ 1.43
RETREG3-204ENST00000586796 OTUD6AQ7L8S5 288 aa24■■□□□ 1.43
RETREG3-204ENST00000586796 IGSF22Q8N9C0 903 aa24■■□□□ 1.43
RETREG3-204ENST00000586796 ZNF579Q8NAF0 562 aaKnown RBP24■■□□□ 1.43
RETREG3-204ENST00000586796 SNX29Q8TEQ0 813 aa24■■□□□ 1.43
RETREG3-204ENST00000586796 PIGOQ8TEQ8 1089 aa24■■□□□ 1.43
RETREG3-204ENST00000586796 CEP170P1Q96L14 293 aa24■■□□□ 1.43
RETREG3-204ENST00000586796 ZNF396Q96N95 335 aaPredicted RBP24■■□□□ 1.43
RETREG3-204ENST00000586796 SUGCTQ9HAC7 445 aa24■■□□□ 1.43
RETREG3-204ENST00000586796 TUFT1Q9NNX1 390 aa24■■□□□ 1.43
RETREG3-204ENST00000586796 SMIM35A0A1B0GVV1 85 aa23.99■■□□□ 1.43
RETREG3-204ENST00000586796 MAGEB2O15479 319 aa23.99■■□□□ 1.43
RETREG3-204ENST00000586796 MARCKSP29966 332 aaPredicted RBP23.99■■□□□ 1.43
RETREG3-204ENST00000586796 ANP32AP39687 249 aaKnown RBP23.99■■□□□ 1.43
RETREG3-204ENST00000586796 PTPAQ15257 358 aa23.99■■□□□ 1.43
RETREG3-204ENST00000586796 TARBP2Q15633 366 aaKnown RBP23.99■■□□□ 1.43
RETREG3-204ENST00000586796 ZRSR1Q15695 479 aaKnown RBP23.99■■□□□ 1.43
RETREG3-204ENST00000586796 XKR9Q5GH70 373 aa23.99■■□□□ 1.43
RETREG3-204ENST00000586796 HAUS3Q68CZ6 603 aa23.99■■□□□ 1.43
RETREG3-204ENST00000586796 EFCAB12Q6NXP0 572 aa23.99■■□□□ 1.43
RETREG3-204ENST00000586796 LRRC71Q8N4P6 559 aa23.99■■□□□ 1.43
RETREG3-204ENST00000586796 POLR3CQ9BUI4 534 aaPredicted RBP23.99■■□□□ 1.43
RETREG3-204ENST00000586796 IL23AQ9NPF7 189 aa23.99■■□□□ 1.43
RETREG3-204ENST00000586796 CYP26B1Q9NR63 512 aa23.99■■□□□ 1.43
RETREG3-204ENST00000586796 WDR81Q562E7 1941 aa23.98■■□□□ 1.43
RETREG3-204ENST00000586796 RPA1P27694 616 aa23.98■■□□□ 1.43
RETREG3-204ENST00000586796 CLCN3P51790 818 aa23.98■■□□□ 1.43
RETREG3-204ENST00000586796 KRT79Q5XKE5 535 aa23.98■■□□□ 1.43
RETREG3-204ENST00000586796 TRAF7Q6Q0C0 670 aa23.98■■□□□ 1.43
RETREG3-204ENST00000586796 POTEGQ6S5H5 508 aa23.98■■□□□ 1.43
RETREG3-204ENST00000586796 CCDC43Q96MW1 224 aaKnown RBP23.98■■□□□ 1.43
RETREG3-204ENST00000586796 PPP1R16BQ96T49 567 aa23.98■■□□□ 1.43
RETREG3-204ENST00000586796 BMP2KQ9NSY1 1161 aaPredicted RBP23.98■■□□□ 1.43
RETREG3-204ENST00000586796 ZDHHC9Q9Y397 364 aa23.98■■□□□ 1.43
RETREG3-204ENST00000586796 CAND2O75155 1236 aa23.97■■□□□ 1.43
RETREG3-204ENST00000586796 LYPLA2O95372 231 aa23.97■■□□□ 1.43
RETREG3-204ENST00000586796 BRD1O95696 1058 aa23.97■■□□□ 1.43
RETREG3-204ENST00000586796 BMP8BP34820 402 aa23.97■■□□□ 1.43
RETREG3-204ENST00000586796 GRIN1Q05586 938 aa23.97■■□□□ 1.43
RETREG3-204ENST00000586796 C16orf59Q7L2K0 433 aa23.97■■□□□ 1.43
RETREG3-204ENST00000586796 RPUSD2Q8IZ73 545 aaKnown RBP23.97■■□□□ 1.43
RETREG3-204ENST00000586796 KIAA0319LQ8IZA0 1049 aa23.97■■□□□ 1.43
RETREG3-204ENST00000586796 STK24Q9Y6E0 443 aa23.97■■□□□ 1.43
RETREG3-204ENST00000586796 CDY2AQ9Y6F7 541 aa23.97■■□□□ 1.43
RETREG3-204ENST00000586796 M0QZ92 97 aa23.96■■□□□ 1.43
RETREG3-204ENST00000586796 NBNO60934 754 aa23.96■■□□□ 1.43
RETREG3-204ENST00000586796 CHRNA1P02708 482 aa23.96■■□□□ 1.43
RETREG3-204ENST00000586796 TMOD1P28289 359 aa23.96■■□□□ 1.43
RETREG3-204ENST00000586796 RFC2P35250 354 aa23.96■■□□□ 1.43
RETREG3-204ENST00000586796 MRPS6P82932 125 aaKnown RBP23.96■■□□□ 1.43
RETREG3-204ENST00000586796 STK38Q15208 465 aa23.96■■□□□ 1.43
RETREG3-204ENST00000586796 SHHQ15465 462 aa23.96■■□□□ 1.43
RETREG3-204ENST00000586796 ECM1Q16610 540 aa23.96■■□□□ 1.43
RETREG3-204ENST00000586796 C9orf50Q5SZB4 431 aa23.96■■□□□ 1.43
RETREG3-204ENST00000586796 RPAINQ86UA6 219 aa23.96■■□□□ 1.43
RETREG3-204ENST00000586796 CEP89Q96ST8 783 aa23.96■■□□□ 1.43
RETREG3-204ENST00000586796 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.96■■□□□ 1.437e-6■■□□□ 11.5
RETREG3-204ENST00000586796 AKT3Q9Y243 479 aa23.96■■□□□ 1.43
RETREG3-204ENST00000586796 GINS2Q9Y248 185 aa23.96■■□□□ 1.43
RETREG3-204ENST00000586796 VTNP04004 478 aa23.95■■□□□ 1.42
RETREG3-204ENST00000586796 POLGP54098 1239 aaPredicted RBP23.95■■□□□ 1.42
RETREG3-204ENST00000586796 MBTPS1Q14703 1052 aa23.95■■□□□ 1.42
RETREG3-204ENST00000586796 GPNMBQ14956 572 aa23.95■■□□□ 1.42
RETREG3-204ENST00000586796 IER5Q5VY09 327 aa23.95■■□□□ 1.42
RETREG3-204ENST00000586796 ZNF365Q70YC5 407 aa23.95■■□□□ 1.42
RETREG3-204ENST00000586796 NME8Q8N427 588 aa23.95■■□□□ 1.42
RETREG3-204ENST00000586796 NACC1Q96RE7 527 aa23.95■■□□□ 1.42
RETREG3-204ENST00000586796 MMTAG2Q9BU76 263 aaKnown RBP23.95■■□□□ 1.42
RETREG3-204ENST00000586796 OSBPL7Q9BZF2 842 aa23.95■■□□□ 1.42
RETREG3-204ENST00000586796 PRO3102Q9H379 93 aa23.95■■□□□ 1.42
RETREG3-204ENST00000586796 ANKEF1Q9NU02 776 aa23.95■■□□□ 1.42
RETREG3-204ENST00000586796 DDX19AQ9NUU7 478 aaKnown RBP23.95■■□□□ 1.42
RETREG3-204ENST00000586796 KIAA1024Q9UPX6 916 aa23.95■■□□□ 1.42
RETREG3-204ENST00000586796 MAFO75444 373 aaPredicted RBP23.94■■□□□ 1.42
RETREG3-204ENST00000586796 FGBP02675 491 aa23.94■■□□□ 1.42
RETREG3-204ENST00000586796 RPLP2P05387 115 aaKnown RBP23.94■■□□□ 1.42
RETREG3-204ENST00000586796 MGAT3Q09327 533 aa23.94■■□□□ 1.42
RETREG3-204ENST00000586796 SLC39A14Q15043 492 aa23.94■■□□□ 1.42
RETREG3-204ENST00000586796 FAM26DQ5JW98 314 aa23.94■■□□□ 1.42
RETREG3-204ENST00000586796 TMEM240Q5SV17 173 aa23.94■■□□□ 1.42
RETREG3-204ENST00000586796 SLC7A3Q8WY07 619 aa23.94■■□□□ 1.42
RETREG3-204ENST00000586796 VWCEQ96DN2 955 aa23.94■■□□□ 1.42
RETREG3-204ENST00000586796 ZNF668Q96K58 619 aaPredicted RBP23.94■■□□□ 1.42
RETREG3-204ENST00000586796 MAP7D2Q96T17 732 aa23.94■■□□□ 1.42
RETREG3-204ENST00000586796 PLIN2Q99541 437 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms