RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 TTC1Q99614 292 aa11.51□□□□□ -0.57
SEC22B-201ENST00000578049 PPARGC1AQ9UBK2 798 aaKnown RBP11.51□□□□□ -0.57
SEC22B-201ENST00000578049 DNAJC12Q9UKB3 198 aa11.51□□□□□ -0.57
SEC22B-201ENST00000578049 SMG5Q9UPR3 1016 aaKnown RBP11.51□□□□□ -0.57
SEC22B-201ENST00000578049 HEG1Q9ULI3 1381 aa11.51□□□□□ -0.57
SEC22B-201ENST00000578049 EEF1DP29692 281 aaKnown RBP11.51□□□□□ -0.57
SEC22B-201ENST00000578049 MYO1EQ12965 1108 aa11.51□□□□□ -0.57
SEC22B-201ENST00000578049 KLC3Q6P597 504 aa11.51□□□□□ -0.57
SEC22B-201ENST00000578049 TTC39CQ8N584 583 aa11.51□□□□□ -0.57
SEC22B-201ENST00000578049 TMEM35BQ8NCS4 154 aa11.51□□□□□ -0.57
SEC22B-201ENST00000578049 ETNK1Q9HBU6 452 aa11.51□□□□□ -0.57
SEC22B-201ENST00000578049 KRT10P13645 584 aa11.51□□□□□ -0.57
SEC22B-201ENST00000578049 NAALADL2Q58DX5 795 aa11.51□□□□□ -0.57
SEC22B-201ENST00000578049 CXorf38Q8TB03 319 aa11.51□□□□□ -0.57
SEC22B-201ENST00000578049 GDAP1Q8TB36 358 aa11.51□□□□□ -0.57
SEC22B-201ENST00000578049 A2ML1A8K2U0 1454 aa11.51□□□□□ -0.57
SEC22B-201ENST00000578049 GNGT2O14610 69 aa11.51□□□□□ -0.57
SEC22B-201ENST00000578049 CYP26B1Q9NR63 512 aa11.51□□□□□ -0.57
SEC22B-201ENST00000578049 GINS2Q9Y248 185 aa11.51□□□□□ -0.57
SEC22B-201ENST00000578049 BMP3P12645 472 aa11.5□□□□□ -0.57
SEC22B-201ENST00000578049 VSNL1P62760 191 aa11.5□□□□□ -0.57
SEC22B-201ENST00000578049 MAML1Q92585 1016 aa11.5□□□□□ -0.57
SEC22B-201ENST00000578049 KIF2CQ99661 725 aa11.5□□□□□ -0.57
SEC22B-201ENST00000578049 SAYSD1Q9NPB0 183 aa11.5□□□□□ -0.57
SEC22B-201ENST00000578049 BBOX1O75936 387 aa11.5□□□□□ -0.57
SEC22B-201ENST00000578049 PRCPP42785 496 aa11.5□□□□□ -0.57
SEC22B-201ENST00000578049 GYS2P54840 703 aa11.5□□□□□ -0.57
SEC22B-201ENST00000578049 RSPH3Q86UC2 560 aa11.5□□□□□ -0.57
SEC22B-201ENST00000578049 DNAAF3Q8N9W5 541 aa11.5□□□□□ -0.57
SEC22B-201ENST00000578049 PROCA1Q8NCQ7 364 aaPredicted RBP11.5□□□□□ -0.57
SEC22B-201ENST00000578049 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.5□□□□□ -0.57
SEC22B-201ENST00000578049 SGSM3Q96HU1 749 aa11.5□□□□□ -0.57
SEC22B-201ENST00000578049 L2HGDHQ9H9P8 463 aa11.5□□□□□ -0.57
SEC22B-201ENST00000578049 THRAP3Q9Y2W1 955 aaKnown RBP11.5□□□□□ -0.57
SEC22B-201ENST00000578049 ARFIP2P53365 341 aa11.5□□□□□ -0.57
SEC22B-201ENST00000578049 IFRD2Q12894 506 aaPredicted RBP11.5□□□□□ -0.57
SEC22B-201ENST00000578049 TRMT10CQ7L0Y3 403 aaKnown RBP11.5□□□□□ -0.57
SEC22B-201ENST00000578049 ATP11CQ8NB49 1132 aa11.5□□□□□ -0.57
SEC22B-201ENST00000578049 KCTD6Q8NC69 237 aa11.5□□□□□ -0.57
SEC22B-201ENST00000578049 ANO3Q9BYT9 981 aa11.5□□□□□ -0.57
SEC22B-201ENST00000578049 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.5□□□□□ -0.57
SEC22B-201ENST00000578049 USP27XA6NNY8 438 aa11.5□□□□□ -0.57
SEC22B-201ENST00000578049 TAC1P20366 129 aa11.5□□□□□ -0.57
SEC22B-201ENST00000578049 ATP2C1P98194 919 aaPredicted RBP11.5□□□□□ -0.57
SEC22B-201ENST00000578049 NLRP10Q86W26 655 aa11.5□□□□□ -0.57
SEC22B-201ENST00000578049 NIM1KQ8IY84 436 aa11.5□□□□□ -0.57
SEC22B-201ENST00000578049 ALKBH8Q96BT7 664 aaKnown RBP11.5□□□□□ -0.57
SEC22B-201ENST00000578049 ZCCHC17Q9NP64 241 aaKnown RBP11.5□□□□□ -0.57
SEC22B-201ENST00000578049 EFCAB6Q5THR3 1501 aa11.5□□□□□ -0.57
SEC22B-201ENST00000578049 THOC5Q13769 683 aaKnown RBP11.5□□□□□ -0.57
SEC22B-201ENST00000578049 XXYLT1Q8NBI6 393 aa11.5□□□□□ -0.57
SEC22B-201ENST00000578049 AIFM3Q96NN9 605 aa11.5□□□□□ -0.57
SEC22B-201ENST00000578049 MED10Q9BTT4 135 aa11.5□□□□□ -0.57
SEC22B-201ENST00000578049 TRPA1O75762 1119 aa11.49□□□□□ -0.57
SEC22B-201ENST00000578049 OATP04181 439 aa11.49□□□□□ -0.57
SEC22B-201ENST00000578049 ACAD11Q709F0 780 aa11.49□□□□□ -0.57
SEC22B-201ENST00000578049 CALN1Q9BXU9 219 aa11.49□□□□□ -0.57
SEC22B-201ENST00000578049 CCSER1Q9C0I3 900 aa11.49□□□□□ -0.57
SEC22B-201ENST00000578049 CNOT8Q9UFF9 292 aaKnown RBP11.49□□□□□ -0.57
SEC22B-201ENST00000578049 CLIC2O15247 247 aa11.49□□□□□ -0.57
SEC22B-201ENST00000578049 NR3C1P04150 777 aa11.49□□□□□ -0.57
SEC22B-201ENST00000578049 HSPA9P38646 679 aaKnown RBP11.49□□□□□ -0.57
SEC22B-201ENST00000578049 CCNI2Q6ZMN8 369 aaPredicted RBP11.49□□□□□ -0.57
SEC22B-201ENST00000578049 RNF207Q6ZRF8 634 aa11.49□□□□□ -0.57
SEC22B-201ENST00000578049 TEX9Q8N6V9 391 aa11.49□□□□□ -0.57
SEC22B-201ENST00000578049 MCPH1Q8NEM0 835 aa11.49□□□□□ -0.57
SEC22B-201ENST00000578049 ADD3Q9UEY8 706 aaKnown RBP11.49□□□□□ -0.57
SEC22B-201ENST00000578049 A0A0G2JND7 137 aa11.49□□□□□ -0.57
SEC22B-201ENST00000578049 F8W8V4 182 aa11.49□□□□□ -0.57
SEC22B-201ENST00000578049 PSMD14O00487 310 aa11.49□□□□□ -0.57
SEC22B-201ENST00000578049 KCNH2Q12809 1159 aa11.49□□□□□ -0.57
SEC22B-201ENST00000578049 SPOPLQ6IQ16 392 aa11.49□□□□□ -0.57
SEC22B-201ENST00000578049 PDXDC1Q6P996 788 aa11.49□□□□□ -0.57
SEC22B-201ENST00000578049 STAG2Q8N3U4 1231 aa11.49□□□□□ -0.57
SEC22B-201ENST00000578049 RAD54LQ92698 747 aa11.49□□□□□ -0.57
SEC22B-201ENST00000578049 C8orf37Q96NL8 207 aa11.49□□□□□ -0.57
SEC22B-201ENST00000578049 GCOM2Q9BZD3 368 aaPredicted RBP11.49□□□□□ -0.57
SEC22B-201ENST00000578049 WWP1Q9H0M0 922 aa11.49□□□□□ -0.57
SEC22B-201ENST00000578049 SEPT10Q9P0V9 454 aa11.49□□□□□ -0.57
SEC22B-201ENST00000578049 SMAPO00193 183 aa11.49□□□□□ -0.57
SEC22B-201ENST00000578049 HSPA4LO95757 839 aa11.49□□□□□ -0.57
SEC22B-201ENST00000578049 GINM1Q9NU53 330 aa11.49□□□□□ -0.57
SEC22B-201ENST00000578049 ADAM22Q9P0K1 906 aa11.49□□□□□ -0.57
SEC22B-201ENST00000578049 LAMC1P11047 1609 aa11.49□□□□□ -0.57
SEC22B-201ENST00000578049 MIS18BP1Q6P0N0 1132 aa11.49□□□□□ -0.57
SEC22B-201ENST00000578049 SCG3Q8WXD2 468 aaKnown RBP11.49□□□□□ -0.57
SEC22B-201ENST00000578049 TGS1Q96RS0 853 aaKnown RBP11.49□□□□□ -0.57
SEC22B-201ENST00000578049 WDR24Q96S15 920 aa11.49□□□□□ -0.57
SEC22B-201ENST00000578049 SUN2Q9UH99 717 aa11.49□□□□□ -0.57
SEC22B-201ENST00000578049 CDH16O75309 829 aa11.49□□□□□ -0.57
SEC22B-201ENST00000578049 FOXP4Q8IVH2 680 aaPredicted RBP11.49□□□□□ -0.57
SEC22B-201ENST00000578049 KCTD17Q8N5Z5 321 aa11.49□□□□□ -0.57
SEC22B-201ENST00000578049 SNF8Q96H20 258 aa11.49□□□□□ -0.57
SEC22B-201ENST00000578049 ANKFY1Q9P2R3 1169 aa11.49□□□□□ -0.57
SEC22B-201ENST00000578049 SHROOM2Q13796 1616 aa11.48□□□□□ -0.57
SEC22B-201ENST00000578049 CDHR2Q9BYE9 1310 aa11.48□□□□□ -0.57
SEC22B-201ENST00000578049 KRT7P08729 469 aa11.48□□□□□ -0.57
SEC22B-201ENST00000578049 MCF2P10911 925 aa11.48□□□□□ -0.57
SEC22B-201ENST00000578049 CCND1P24385 295 aa11.48□□□□□ -0.57
SEC22B-201ENST00000578049 CDC25AP30304 524 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms